The AraC/XylS Protein MxiE and Its Coregulator IpgC Control a Negative Feedback Loop in the Transcriptional Cascade That Regulates Type III Secretion in Shigella flexneri

• Published in: Journal of bacteriology Vol. 204; no. 7; p. e0013722
• Main Authors: McKenna, Joy A, Karney, Monika M A, Chan, Daniel K, Weatherspoon-Griffin, Natasha, Becerra Larios, Brianda, Pilonieta, M Carolina, Munson, George P, Wing, Helen J
• Format: Journal Article
• Language: English
• Published: United States American Society for Microbiology 19.07.2022
• Subjects: Bacterial Proteins - metabolism; Bacteriology; Control theory; Cytarabine - metabolism; DNA-Binding Proteins - metabolism; Feedback; Feedback loops; Gene expression; Gene Expression Regulation, Bacterial; Genes; Genetics and Molecular Biology; Homology; Negative feedback; Proteins; Research Article; Secretion; Shigella; Shigella flexneri - genetics; Shigella flexneri - metabolism; Transcription; Transcription, Genetic; Type III Secretion Systems - genetics; Type III Secretion Systems - metabolism; VirB protein; Virulence; Virulence Factors - genetics; Virulence Factors - metabolism; IpgC; virB promoter; MxiE; negative AraC-like regulator; negative feedback loop; type III secretion system; ospD1 promoter; Shigella; type III secretion; VirF
• ISSN: 0021-9193; 1098-5530
• DOI: 10.1128/jb.00137-22

Members of the AraC family of transcriptional regulators (AFTRs) control the expression of many genes important to cellular processes, including virulence. In species, the type III secretion system (T3SS), a key determinant for host cell invasion, is regulated by the three-tiered VirF/VirB/MxiE transcriptional cascade. Both VirF and MxiE belong to the AFTRs and are characterized as positive transcriptional regulators. Here, we identify a novel regulatory activity for MxiE and its coregulator IpgC, which manifests as a negative feedback loop in the VirF/VirB/MxiE transcriptional cascade. Our findings show that MxiE and IpgC downregulate the promoter and, hence, VirB protein production, thus decreasing VirB-dependent promoter activity at , one of the nearly 50 VirB-dependent genes. At the promoter, regions required for negative MxiE- and IpgC-dependent regulation were mapped and found to be coincident with regions required for positive VirF-dependent regulation. In tandem, negative MxiE- and IpgC-dependent regulation of the promoter only occurred in the presence of VirF, suggesting that MxiE and IpgC can function to counter VirF activation of the promoter. Lastly, MxiE and IpgC do not downregulate another VirF-activated promoter, , demonstrating that this negative feedback loop targets the promoter. Our study provides insight into a mechanism that may reprogram virulence gene expression following type III secretion and provides the impetus to examine if MxiE and IpgC homologs in other important bacterial pathogens, such as Burkholderia pseudomallei and Salmonella enterica serovars Typhimurium and Typhi, coordinate similar negative feedback loops. The large AraC family of transcriptional regulators (AFTRs) control virulence gene expression in many bacterial pathogens. In species, the AraC/XylS protein MxiE and its coregulator IpgC positively regulate the expression of type III secretion system genes within the three-tiered VirF/VirB/MxiE transcriptional cascade. Our findings suggest a negative feedback loop in the VirF/VirB/MxiE cascade, in which MxiE and IpgC counter VirF-dependent activation of the promoter, thus making this the first characterization of negative MxiE- and IpgC-dependent regulation. Our study provides insight into a mechanism that likely reprograms virulence gene expression following type III secretion, which has implications for other important bacterial pathogens with functional homologs of MxiE and IpgC.