Dissecting the Conformational Stability of a Glycan Hairpin

• Published in: Journal of the American Chemical Society Vol. 146; no. 9; pp. 6369 - 6376
• Main Authors: Yadav, Nishu, Djalali, Surusch, Poveda, Ana, Ricardo, Manuel G., Seeberger, Peter H., Jiménez-Barbero, Jesús, Delbianco, Martina
• Format: Journal Article
• Language: English
• Published: United States American Chemical Society 06.03.2024
• Subjects: Amino Acid Sequence; aqueous solutions; glycomics; Molecular Conformation; molecular dynamics; nuclear magnetic resonance spectroscopy; oligopeptides; Oligopeptides - chemistry; Polysaccharides; Protein Folding; trisaccharides
• ISSN: 0002-7863; 1520-5126; 1520-5126
• DOI: 10.1021/jacs.4c00423

Systematic structural studies of model oligopeptides revealed important aspects of protein folding and offered design principles to access non-natural materials. In the same way, the rules that regulate glycan folding could be established by studying synthetic oligosaccharide models. However, their analysis is often limited due to the synthetic and analytical complexity. By utilizing a glycan capable of spontaneously folding into a hairpin conformation as a model system, we investigated the factors that contribute to its conformational stability in aqueous solution. The modular design of the hairpin model featured a trisaccharide turn unit and two β-1,4-oligoglucoside stacking strands that allowed for systematic chemical modifications of the glycan sequence, including the introduction of NMR labels and staples. Nuclear magnetic resonance assisted by molecular dynamics simulations revealed that stereoelectronic effects and multiple glycan–glycan interactions are the major determinants of folding stabilization. Chemical modifications in the glycan primary sequence (e.g., strand elongation) can be employed to fine-tune the rigidity of structural motifs distant from the modification sites. These results could inspire the design of other glycan architectures, with implications in glycobiology and material sciences.