Assessing models for prediction of some soil chemical properties from portable X-ray fluorescence (pXRF) spectrometry data in Brazilian Coastal Plains
Portable X-ray fluorescence (pXRF) spectrometry is becoming increasingly popular for predicting soil properties worldwide. However, there are still very few works on this subject under tropical conditions. Therefore, the objectives of this study were to use pXRF data to characterize the Brazilian Co...
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Published in | Geoderma Vol. 357; p. 113957 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
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Elsevier B.V
01.01.2020
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Abstract | Portable X-ray fluorescence (pXRF) spectrometry is becoming increasingly popular for predicting soil properties worldwide. However, there are still very few works on this subject under tropical conditions. Therefore, the objectives of this study were to use pXRF data to characterize the Brazilian Coastal Plains (BCP) soils and assess four machine learning algorithms [ordinary least squares regression (OLS), cubist regression (CR), XGBoost (XGB), and random forest (RF)] for prediction of total nitrogen (TN), cation exchange capacity (CEC), and soil organic matter (SOM) using pXRF data. A total of 285 soil samples were collected from the A and B horizons representing Ultisols, Oxisols, Spodosols, and Entisols. The pXRF reported elements helped in the characterization of the BCP soils. In general, the RF model achieved the best performances for TN (R2 = 0.50), CEC (0.75), and SOM (0.56) when A and B horizons were combined, although better results have been reported in the literature for soils from other regions of the world. The results reported here for the BCP soils represent alternatives for reducing costs and time needed for assessing such data, supporting agronomic and environmental strategies.
•The elemental data provided by pXRF were used to characterize the BCP soils•Four different prediction algorithms were used to predict SOM, TN, and CEC•In general, RF algorithm outperformed OLS, XGBoost, and CR algorithms |
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AbstractList | Portable X-ray fluorescence (pXRF) spectrometry is becoming increasingly popular for predicting soil properties worldwide. However, there are still very few works on this subject under tropical conditions. Therefore, the objectives of this study were to use pXRF data to characterize the Brazilian Coastal Plains (BCP) soils and assess four machine learning algorithms [ordinary least squares regression (OLS), cubist regression (CR), XGBoost (XGB), and random forest (RF)] for prediction of total nitrogen (TN), cation exchange capacity (CEC), and soil organic matter (SOM) using pXRF data. A total of 285 soil samples were collected from the A and B horizons representing Ultisols, Oxisols, Spodosols, and Entisols. The pXRF reported elements helped in the characterization of the BCP soils. In general, the RF model achieved the best performances for TN (R2 = 0.50), CEC (0.75), and SOM (0.56) when A and B horizons were combined, although better results have been reported in the literature for soils from other regions of the world. The results reported here for the BCP soils represent alternatives for reducing costs and time needed for assessing such data, supporting agronomic and environmental strategies. Portable X-ray fluorescence (pXRF) spectrometry is becoming increasingly popular for predicting soil properties worldwide. However, there are still very few works on this subject under tropical conditions. Therefore, the objectives of this study were to use pXRF data to characterize the Brazilian Coastal Plains (BCP) soils and assess four machine learning algorithms [ordinary least squares regression (OLS), cubist regression (CR), XGBoost (XGB), and random forest (RF)] for prediction of total nitrogen (TN), cation exchange capacity (CEC), and soil organic matter (SOM) using pXRF data. A total of 285 soil samples were collected from the A and B horizons representing Ultisols, Oxisols, Spodosols, and Entisols. The pXRF reported elements helped in the characterization of the BCP soils. In general, the RF model achieved the best performances for TN (R2 = 0.50), CEC (0.75), and SOM (0.56) when A and B horizons were combined, although better results have been reported in the literature for soils from other regions of the world. The results reported here for the BCP soils represent alternatives for reducing costs and time needed for assessing such data, supporting agronomic and environmental strategies. •The elemental data provided by pXRF were used to characterize the BCP soils•Four different prediction algorithms were used to predict SOM, TN, and CEC•In general, RF algorithm outperformed OLS, XGBoost, and CR algorithms |
ArticleNumber | 113957 |
Author | Andrade, Renata Weindorf, David C. Faria, Wilson Missina Curi, Nilton Silva, Sérgio Henrique Godinho Guilherme, Luiz Roberto Guimarães Chakraborty, Somsubhra Mesquita, Luiz Felipe |
Author_xml | – sequence: 1 givenname: Renata surname: Andrade fullname: Andrade, Renata organization: Department of Soil Science, Federal University of Lavras, Lavras, MG, Brazil – sequence: 2 givenname: Sérgio Henrique Godinho surname: Silva fullname: Silva, Sérgio Henrique Godinho organization: Department of Soil Science, Federal University of Lavras, Lavras, MG, Brazil – sequence: 3 givenname: David C. surname: Weindorf fullname: Weindorf, David C. organization: Department of Plant and Soil Science, Texas Tech University, Lubbock, TX, USA – sequence: 4 givenname: Somsubhra surname: Chakraborty fullname: Chakraborty, Somsubhra email: somsubhra@agfe.iitkgp.ac.in organization: Indian Institute of Technology Kharagpur, Kharagpur, India – sequence: 5 givenname: Wilson Missina surname: Faria fullname: Faria, Wilson Missina organization: Department of Soil Science, Federal University of Lavras, Lavras, MG, Brazil – sequence: 6 givenname: Luiz Felipe surname: Mesquita fullname: Mesquita, Luiz Felipe organization: Suzano Papel e Celulose, Espírito Santo, ES, Brazil – sequence: 7 givenname: Luiz Roberto Guimarães surname: Guilherme fullname: Guilherme, Luiz Roberto Guimarães organization: Department of Soil Science, Federal University of Lavras, Lavras, MG, Brazil – sequence: 8 givenname: Nilton surname: Curi fullname: Curi, Nilton organization: Department of Soil Science, Federal University of Lavras, Lavras, MG, Brazil |
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Keywords | CEC Machine learning algorithms pXRF Kaolinitic soils RMSE BCP CR PCA SOM CS XGB Cation exchange capacity Total nitrogen RF Cohesive soils OLS Soil organic matter TN MSE |
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Snippet | Portable X-ray fluorescence (pXRF) spectrometry is becoming increasingly popular for predicting soil properties worldwide. However, there are still very few... |
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SubjectTerms | A horizons algorithms artificial intelligence B horizons Cation exchange capacity coastal plains Cohesive soils Entisols fluorescence Kaolinitic soils least squares Machine learning algorithms Oxisols prediction Soil organic matter soil sampling Spodosols Total nitrogen Ultisols X-ray fluorescence spectroscopy |
Title | Assessing models for prediction of some soil chemical properties from portable X-ray fluorescence (pXRF) spectrometry data in Brazilian Coastal Plains |
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