Structure–Enantioselectivity Relationship (SER) Study of Cinchona Alkaloid Chlorocyclization Catalysts

• Published in: Journal of organic chemistry Vol. 89; no. 17; pp. 11921 - 11929
• Main Authors: Luderer, Sarah E., Masoudi, Behrad, Sarkar, Aritra, Grant, Calvin, Jaganathan, Arvind, Jackson, James E., Borhan, Babak
• Format: Journal Article
• Language: English
• Published: United States American Chemical Society 06.09.2024
• ISSN: 0022-3263; 1520-6904; 1520-6904
• DOI: 10.1021/acs.joc.3c00084

Various structural elements of the Cinchona alkaloid dimers are interrogated to establish a structure–enantioselectivity relationship (SER) in three different halocyclization reactions. SER for chlorocyclizations of a 1,1-disubstituted alkenoic acid, a 1,1-disubstituted alkeneamide, and a trans-1,2-disubstituted alkeneamide showed variable sensitivities to linker rigidity and polarity, aspects of the alkaloid structure, and the presence of two or only one alkaloid side group defining the catalyst pocket. The conformational rigidity of the linker–ether connections was probed via DFT calculations on the methoxylated models, uncovering especially high barriers to ether rotation out of plane in the arene systems that include the pyridazine ring. These linkers are also found in the catalysts with the highest enantioinduction. The diversity of the SER results suggested that the three apparently analogous test reactions may proceed by significantly different mechanisms. Based on these findings, a stripped-down analogue of (DHQD)2PYDZ, termed “(trunc)2PYDZ”, was designed, synthesized, and evaluated, showing modest but considerable asymmetric induction in the three test reactions, with the best performance on the 1,1-disubstituted alkeneamide cyclization. This first effort to map out the factors essential to effective stereocontrol and reaction promotion offers guidance for the simplified design and systematic refinement of new, selective organocatalysts.