Complete genome sequence of multidrug-resistant Raoultella terrigena strain RT01-5M1 isolated from farmed salmon in Canada

The genome sequence of multidrug-resistant RT01-5M1 strain isolated from Canadian farmed salmon was determined using Oxford nanopore and Illumina MiSeq sequencers. The assembled chromosome was estimated at 5,699,993 bp in size, with two plasmids, 164,879 bp and 82,046 bp. The chromosome and smaller...

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Published inMicrobiology resource announcements Vol. 13; no. 7; p. e0015324
Main Authors Zhang, Bei, Tan, Tianbi, Smith, Derek D N, Duceppe, Marc-Olivier, Rudra, Bashudev, Gupta, Radhey S, Ogunremi, Dele
Format Journal Article
LanguageEnglish
Published United States American Society for Microbiology 18.07.2024
Subjects
Antimicrobial Chemotherapy
Genome Sequences
salmon
antimicrobial
aquaculture
Raoultella terrigena
multidrug
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Summary:The genome sequence of multidrug-resistant RT01-5M1 strain isolated from Canadian farmed salmon was determined using Oxford nanopore and Illumina MiSeq sequencers. The assembled chromosome was estimated at 5,699,993 bp in size, with two plasmids, 164,879 bp and 82,046 bp. The chromosome and smaller plasmid contained antimicrobial resistance genes.
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The authors declare no conflict of interest.
ISSN:2576-098X
2576-098X
DOI:10.1128/mra.00153-24