Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphol...
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| Abstract | ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits. |
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| AbstractList | ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits. |
| Author | Fukuji, Anderson Yusei Suzuki Zeffa, Douglas Mariani Baba, Viviane Yumi Gonçalves, Leandro Simões Azeredo Erpen-Dalla Corte, Ligia Resende, Juliano Tadeu Vilela Constantino, Leonel Vinicius Giacomin, Renata Mussoi |
| AuthorAffiliation | Universidade Estadual de Maringá Universidade Estadual de Londrina |
| AuthorAffiliation_xml | – name: Universidade Estadual de Maringá – name: Universidade Estadual de Londrina |
| Author_xml | – sequence: 1 givenname: Leonel Vinicius surname: Constantino fullname: Constantino, Leonel Vinicius organization: Universidade Estadual de Londrina – sequence: 2 givenname: Anderson Yusei Suzuki surname: Fukuji fullname: Fukuji, Anderson Yusei Suzuki organization: Universidade Estadual de Londrina – sequence: 3 givenname: Douglas Mariani surname: Zeffa fullname: Zeffa, Douglas Mariani organization: Universidade Estadual de Maringá – sequence: 4 givenname: Viviane Yumi surname: Baba fullname: Baba, Viviane Yumi organization: Universidade Estadual de Londrina – sequence: 5 givenname: Ligia surname: Erpen-Dalla Corte fullname: Erpen-Dalla Corte, Ligia organization: Universidade Estadual de Londrina – sequence: 6 givenname: Renata Mussoi surname: Giacomin fullname: Giacomin, Renata Mussoi organization: Universidade Estadual de Londrina – sequence: 7 givenname: Juliano Tadeu Vilela surname: Resende fullname: Resende, Juliano Tadeu Vilela organization: Universidade Estadual de Londrina – sequence: 8 givenname: Leandro Simões Azeredo surname: Gonçalves fullname: Gonçalves, Leandro Simões Azeredo organization: Universidade Estadual de Londrina |
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| ContentType | Journal Article |
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| DOI | 10.1590/1678-4499.20190525 |
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| Keywords | Capsicum baccatum AFLP molecular markers fruit quality germplasm bank |
| Language | Portuguese |
| License | This work is licensed under a Creative Commons Attribution 4.0 International License. http://creativecommons.org/licenses/by/4.0 |
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| Title | Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
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