Exploring borderline S1-S2 mechanisms: the role of explicit solvation protocols in the DFT investigation of isopropyl chloride

Nucleophilic substitution at saturated carbon is a crucial class of organic reactions, playing a pivotal role in various chemical transformations that yield valuable compounds for society. Despite the well-established S N 1 and S N 2 mechanisms, secondary substrates, particularly in solvolysis react...

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Published inRSC advances Vol. 14; no. 7; pp. 4692 - 471
Main Authors de Andrade, Karine Nascimento, Peixoto, Bárbara Pereira, Carneiro, José Walkimar de Mesquita, Fiorot, Rodolfo Goetze
Format Journal Article
Published 05.02.2024
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Abstract Nucleophilic substitution at saturated carbon is a crucial class of organic reactions, playing a pivotal role in various chemical transformations that yield valuable compounds for society. Despite the well-established S N 1 and S N 2 mechanisms, secondary substrates, particularly in solvolysis reactions, often exhibit a borderline pathway. A molecular-level understanding of these processes is fundamental for developing more efficient chemical transformations. Typically, quantum-chemical simulations of the solvent medium combine explicit and implicit solvation methods. The configuration of explicit molecules can be defined through top-down approaches, such as Monte Carlo (MC) calculations for generating initial configurations, and bottom-up methods that involve user-dependent protocols to add solvent molecules around the substrate. Herein, we investigated the borderline mechanism of the hydrolysis of a secondary substrate, isopropyl chloride ( i PrCl), at DFT-M06-2X/aug-cc-pVDZ level, employing explicit and explicit + implicit protocols. Top-down and bottom-up approaches were employed to generate substrate-solvent complexes of varying number ( n = 1, 3, 5, 7, 9, and 12) and configurations of H 2 O molecules. Our findings consistently reveal that regardless of the solvation approach, the hydrolysis of i PrCl follows a loose-S N 2-like mechanism with nucleophilic solvent assistance. Increasing the water cluster around the substrate in most cases led to reaction barriers of Δ H ‡ 21 kcal mol −1 , with nine water molecules from MC configurations sufficient to describe the reaction. The More O'Ferrall-Jencks plot demonstrates an S N 1-like character for all transition state structures, showing a clear merged profile. The fragmentation activation strain analyses indicate that energy barriers are predominantly controlled by solvent-substrate interactions, supported by the leaving group stabilization assessed through CHELPG atomic charges. We explored borderline S N X reactions quantum-chemically, revealing a preferred dissociative-S N 2 pathway controlled by solute-solvent interactions through various solvation models.
AbstractList Nucleophilic substitution at saturated carbon is a crucial class of organic reactions, playing a pivotal role in various chemical transformations that yield valuable compounds for society. Despite the well-established S N 1 and S N 2 mechanisms, secondary substrates, particularly in solvolysis reactions, often exhibit a borderline pathway. A molecular-level understanding of these processes is fundamental for developing more efficient chemical transformations. Typically, quantum-chemical simulations of the solvent medium combine explicit and implicit solvation methods. The configuration of explicit molecules can be defined through top-down approaches, such as Monte Carlo (MC) calculations for generating initial configurations, and bottom-up methods that involve user-dependent protocols to add solvent molecules around the substrate. Herein, we investigated the borderline mechanism of the hydrolysis of a secondary substrate, isopropyl chloride ( i PrCl), at DFT-M06-2X/aug-cc-pVDZ level, employing explicit and explicit + implicit protocols. Top-down and bottom-up approaches were employed to generate substrate-solvent complexes of varying number ( n = 1, 3, 5, 7, 9, and 12) and configurations of H 2 O molecules. Our findings consistently reveal that regardless of the solvation approach, the hydrolysis of i PrCl follows a loose-S N 2-like mechanism with nucleophilic solvent assistance. Increasing the water cluster around the substrate in most cases led to reaction barriers of Δ H ‡ 21 kcal mol −1 , with nine water molecules from MC configurations sufficient to describe the reaction. The More O'Ferrall-Jencks plot demonstrates an S N 1-like character for all transition state structures, showing a clear merged profile. The fragmentation activation strain analyses indicate that energy barriers are predominantly controlled by solvent-substrate interactions, supported by the leaving group stabilization assessed through CHELPG atomic charges. We explored borderline S N X reactions quantum-chemically, revealing a preferred dissociative-S N 2 pathway controlled by solute-solvent interactions through various solvation models.
Author Peixoto, Bárbara Pereira
Fiorot, Rodolfo Goetze
de Andrade, Karine Nascimento
Carneiro, José Walkimar de Mesquita
AuthorAffiliation Department of Inorganic Chemistry
Department of Organic Chemistry
Universidade Federal Fluminense (UFF)
Chemistry Institute
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Title Exploring borderline S1-S2 mechanisms: the role of explicit solvation protocols in the DFT investigation of isopropyl chloride
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