Tuning calcium biosensors with a single-site mutation: structural dynamics insights from femtosecond Raman spectroscopyElectronic supplementary information (ESI) available: Further discussion on the significance and perspective of this work, Fig. S1-S4 and Tables S1, S2, and additional references. See DOI: 10.1039/c6cp08821j

Fluorescent protein biosensors are popular reporters for biological processes and life sciences, but their fundamental working mechanisms remain unclear. To characterize the functional fluorescence events on their native timescales, we implemented wavelength-tunable femtosecond stimulated Raman spec...

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Main Authors Tachibana, Sean R, Tang, Longteng, Wang, Yanli, Zhu, Liangdong, Liu, Weimin, Fang, Chong
Format Journal Article
LanguageEnglish
Published 08.03.2017
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Abstract Fluorescent protein biosensors are popular reporters for biological processes and life sciences, but their fundamental working mechanisms remain unclear. To characterize the functional fluorescence events on their native timescales, we implemented wavelength-tunable femtosecond stimulated Raman spectroscopy (FSRS) to shed light on a blue-green emission-ratiometric fluorescent protein based Ca 2+ biosensor with a single Pro377Arg mutation. The transient Raman modes of the embedded chromophore from ca. 1000-1650 cm −1 exhibit characteristic intensity and frequency dynamics which infer the underlying atomic motions and photochemical reaction stages. Our experimental study reveals the hidden structural inhomogeneity of the protein local environment upon Ca 2+ binding with the mutated arginine residue trapping multiple chromophore subpopulations, which manifest distinct time constants of ∼16 and 90 ps for excited state proton transfer (ESPT) following 400 nm photoexcitation. The altered ESPT reaction pathways and emission properties of the Ca 2+ biosensor represent the foundational step of rationally designing advanced fluorescent protein biosensors to tune their functionalities by site-specifically altering the local environment ( e.g. , the active site) of the embedded chromophore. Structural dynamics governing the emission properties of a single-site mutant of fluorescent-protein-based calcium biosensors are elucidated by femtosecond stimulated Raman spectroscopy.
AbstractList Fluorescent protein biosensors are popular reporters for biological processes and life sciences, but their fundamental working mechanisms remain unclear. To characterize the functional fluorescence events on their native timescales, we implemented wavelength-tunable femtosecond stimulated Raman spectroscopy (FSRS) to shed light on a blue-green emission-ratiometric fluorescent protein based Ca 2+ biosensor with a single Pro377Arg mutation. The transient Raman modes of the embedded chromophore from ca. 1000-1650 cm −1 exhibit characteristic intensity and frequency dynamics which infer the underlying atomic motions and photochemical reaction stages. Our experimental study reveals the hidden structural inhomogeneity of the protein local environment upon Ca 2+ binding with the mutated arginine residue trapping multiple chromophore subpopulations, which manifest distinct time constants of ∼16 and 90 ps for excited state proton transfer (ESPT) following 400 nm photoexcitation. The altered ESPT reaction pathways and emission properties of the Ca 2+ biosensor represent the foundational step of rationally designing advanced fluorescent protein biosensors to tune their functionalities by site-specifically altering the local environment ( e.g. , the active site) of the embedded chromophore. Structural dynamics governing the emission properties of a single-site mutant of fluorescent-protein-based calcium biosensors are elucidated by femtosecond stimulated Raman spectroscopy.
Author Fang, Chong
Wang, Yanli
Tang, Longteng
Tachibana, Sean R
Zhu, Liangdong
Liu, Weimin
AuthorAffiliation Department of Chemistry
263 Linus Pauling Science Centre (lab)
Oregon State University
Department of Physics
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Electronic supplementary information (ESI) available: Further discussion on the significance and perspective of this work, Fig. S1-S4 and Tables S1, S2, and additional references. See DOI
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  publication-title: Gaussian 09, Revision B.1
  doi: Frisch Trucks Schlegel Scuseria Robb Cheeseman Scalmani Barone Mennucci Petersson Nakatsuji Caricato Li Hratchian Izmaylov Bloino Zheng Sonnenberg Hada Ehara Toyota Fukuda Hasegawa Ishida Nakajima Honda Kitao Nakai Vreven Montgomery Peralta Ogliaro Bearpark Heyd Brothers Kudin Staroverov Kobayashi Normand Raghavachari Rendell Burant Iyengar Tomasi Cossi Rega Millam Klene Knox Cross Bakken Adamo Jaramillo Gomperts Stratmann Yazyev Austin Cammi Pomelli Ochterski Martin Morokuma Zakrzewski Voth Salvador Dannenberg Dapprich Daniels Farkas Foresman Ortiz Cioslowski Fox
– issn: 2012
  end-page: p 125-134
  publication-title: Unnatural Amino Acids
  doi: Peeler Mehl
– issn: 1994
  publication-title: Femtochemistry: Ultrafast Dynamics of the Chemical Bond
  doi: Zewail
– issn: 2012
  publication-title: Fluorescent Proteins II: Application of Fluorescent Protein Technology
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Title Tuning calcium biosensors with a single-site mutation: structural dynamics insights from femtosecond Raman spectroscopyElectronic supplementary information (ESI) available: Further discussion on the significance and perspective of this work, Fig. S1-S4 and Tables S1, S2, and additional references. See DOI: 10.1039/c6cp08821j
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