Efficient Approximations of Complete Interatomic Potentials for Crystal Property Prediction

We study property prediction for crystal materials. A crystal structure consists of a minimal unit cell that is repeated infinitely in 3D space. How to accurately represent such repetitive structures in machine learning models remains unresolved. Current methods construct graphs by establishing edge...

Full description

Saved in:
Bibliographic Details
Published inarXiv.org
Main Authors Lin, Yuchao, Yan, Keqiang, Luo, Youzhi, Liu, Yi, Qian, Xiaoning, Ji, Shuiwang
Format Paper
LanguageEnglish
Published Ithaca Cornell University Library, arXiv.org 07.11.2023
Subjects
Online AccessGet full text

Cover

Loading…
Abstract We study property prediction for crystal materials. A crystal structure consists of a minimal unit cell that is repeated infinitely in 3D space. How to accurately represent such repetitive structures in machine learning models remains unresolved. Current methods construct graphs by establishing edges only between nearby nodes, thereby failing to faithfully capture infinite repeating patterns and distant interatomic interactions. In this work, we propose several innovations to overcome these limitations. First, we propose to model physics-principled interatomic potentials directly instead of only using distances as in many existing methods. These potentials include the Coulomb potential, London dispersion potential, and Pauli repulsion potential. Second, we model the complete set of potentials among all atoms, instead of only between nearby atoms as in existing methods. This is enabled by our approximations of infinite potential summations, where we extend the Ewald summation for several potential series approximations with provable error bounds. Finally, we propose to incorporate our computations of complete interatomic potentials into message passing neural networks for representation learning. We perform experiments on the JARVIS and Materials Project benchmarks for evaluation. Results show that the use of interatomic potentials and complete interatomic potentials leads to consistent performance improvements with reasonable computational costs. Our code is publicly available as part of the AIRS library (https://github.com/divelab/AIRS/tree/main/OpenMat/PotNet).
AbstractList We study property prediction for crystal materials. A crystal structure consists of a minimal unit cell that is repeated infinitely in 3D space. How to accurately represent such repetitive structures in machine learning models remains unresolved. Current methods construct graphs by establishing edges only between nearby nodes, thereby failing to faithfully capture infinite repeating patterns and distant interatomic interactions. In this work, we propose several innovations to overcome these limitations. First, we propose to model physics-principled interatomic potentials directly instead of only using distances as in many existing methods. These potentials include the Coulomb potential, London dispersion potential, and Pauli repulsion potential. Second, we model the complete set of potentials among all atoms, instead of only between nearby atoms as in existing methods. This is enabled by our approximations of infinite potential summations, where we extend the Ewald summation for several potential series approximations with provable error bounds. Finally, we propose to incorporate our computations of complete interatomic potentials into message passing neural networks for representation learning. We perform experiments on the JARVIS and Materials Project benchmarks for evaluation. Results show that the use of interatomic potentials and complete interatomic potentials leads to consistent performance improvements with reasonable computational costs. Our code is publicly available as part of the AIRS library (https://github.com/divelab/AIRS/tree/main/OpenMat/PotNet).
Author Lin, Yuchao
Liu, Yi
Yan, Keqiang
Luo, Youzhi
Qian, Xiaoning
Ji, Shuiwang
Author_xml – sequence: 1
  givenname: Yuchao
  surname: Lin
  fullname: Lin, Yuchao
– sequence: 2
  givenname: Keqiang
  surname: Yan
  fullname: Yan, Keqiang
– sequence: 3
  givenname: Youzhi
  surname: Luo
  fullname: Luo, Youzhi
– sequence: 4
  givenname: Yi
  surname: Liu
  fullname: Liu, Yi
– sequence: 5
  givenname: Xiaoning
  surname: Qian
  fullname: Qian, Xiaoning
– sequence: 6
  givenname: Shuiwang
  surname: Ji
  fullname: Ji, Shuiwang
BookMark eNqNjUEKwjAURIMoWLV3CLgu1MTWbqVUdNeFOxcl1B9IafNr8gv29kbwAK7mwTxmNmxp0cKCRULKQ1IchViz2PsuTVORn0SWyYg9Kq1Na8ASP4-jw7cZFBm0nqPmJQ5jDwT8ZgmcIhxMy2ukYBvVe67R8dLNnlTPa4cjOJoDwNO0340dW-mgQfzLLdtfqnt5TcLPawJPTYeTs6FqRCGKLMulFPI_6wN4akXQ
ContentType Paper
Copyright 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Copyright_xml – notice: 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
DBID 8FE
8FG
ABJCF
ABUWG
AFKRA
AZQEC
BENPR
BGLVJ
CCPQU
DWQXO
HCIFZ
L6V
M7S
PIMPY
PQEST
PQQKQ
PQUKI
PRINS
PTHSS
DatabaseName ProQuest SciTech Collection
ProQuest Technology Collection
Materials Science & Engineering Collection
ProQuest Central (Alumni)
ProQuest Central UK/Ireland
ProQuest Central Essentials
AUTh Library subscriptions: ProQuest Central
Technology Collection
ProQuest One Community College
ProQuest Central
SciTech Premium Collection (Proquest) (PQ_SDU_P3)
ProQuest Engineering Collection
Engineering Database
Publicly Available Content Database
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central China
Engineering Collection
DatabaseTitle Publicly Available Content Database
Engineering Database
Technology Collection
ProQuest Central Essentials
ProQuest One Academic Eastern Edition
ProQuest Central (Alumni Edition)
SciTech Premium Collection
ProQuest One Community College
ProQuest Technology Collection
ProQuest SciTech Collection
ProQuest Central China
ProQuest Central
ProQuest Engineering Collection
ProQuest One Academic UKI Edition
ProQuest Central Korea
Materials Science & Engineering Collection
ProQuest One Academic
Engineering Collection
DatabaseTitleList Publicly Available Content Database
Database_xml – sequence: 1
  dbid: 8FG
  name: ProQuest Technology Collection
  url: https://search.proquest.com/technologycollection1
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Physics
EISSN 2331-8422
Genre Working Paper/Pre-Print
GroupedDBID 8FE
8FG
ABJCF
ABUWG
AFKRA
ALMA_UNASSIGNED_HOLDINGS
AZQEC
BENPR
BGLVJ
CCPQU
DWQXO
FRJ
HCIFZ
L6V
M7S
M~E
PIMPY
PQEST
PQQKQ
PQUKI
PRINS
PTHSS
ID FETCH-proquest_journals_28285563323
IEDL.DBID 8FG
IngestDate Tue Sep 24 22:05:21 EDT 2024
IsOpenAccess true
IsPeerReviewed false
IsScholarly false
Language English
LinkModel DirectLink
MergedId FETCHMERGED-proquest_journals_28285563323
OpenAccessLink https://www.proquest.com/docview/2828556332/abstract/?pq-origsite=%requestingapplication%
PQID 2828556332
PQPubID 2050157
ParticipantIDs proquest_journals_2828556332
PublicationCentury 2000
PublicationDate 20231107
PublicationDateYYYYMMDD 2023-11-07
PublicationDate_xml – month: 11
  year: 2023
  text: 20231107
  day: 07
PublicationDecade 2020
PublicationPlace Ithaca
PublicationPlace_xml – name: Ithaca
PublicationTitle arXiv.org
PublicationYear 2023
Publisher Cornell University Library, arXiv.org
Publisher_xml – name: Cornell University Library, arXiv.org
SSID ssj0002672553
Score 3.492012
SecondaryResourceType preprint
Snippet We study property prediction for crystal materials. A crystal structure consists of a minimal unit cell that is repeated infinitely in 3D space. How to...
SourceID proquest
SourceType Aggregation Database
SubjectTerms Algorithms
Approximation
Coulomb potential
Crystal structure
Machine learning
Message passing
Neural networks
Repetitive structures
Unit cell
Title Efficient Approximations of Complete Interatomic Potentials for Crystal Property Prediction
URI https://www.proquest.com/docview/2828556332/abstract/
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LS8NAEB5qg-DNJz5qWdBriM1j05yKlsQgtARRKHgo2WQDBU3aZAV78bd3Zm30IPSWJbAky-w8vpn5BuBW5KlXcPTc0NhkposyZQqeuyauPP9OYAhQUEZ3MuXxq_s082YdiNteGCqrbHWiVtR5lRFGblFoQGRWjm2lglCATFmj5cqk-VGUZ90O09gDY0CceNQzHj3-oi0299F3dv4pXG1FokMwknQp6yPoyPIY9nXxZdacwFuoeRxQ_bN7ovj-Wvz0EzasKhhdWDxbyTR2hyHyxyJjSaWoygdFh6HTycb1Gp28d5YQsl6rNT5Q_oX2OIWbKHwZx2b7RfOt9DTzv391zqBbVqU8B-alQ-EEGI0Jjl5AzoMikIUkalnXzoPB8AJ6u3a63P36Cg5okLrusvN70FX1p7xGc6tEX59kH4yHcJo842ryHW4AcB2MFg
link.rule.ids 786,790,12792,21416,33408,33779,43635,43840
linkProvider ProQuest
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LS8NAEB60RezNJz6qLuh1UZPNpjmJlMaobcmhQsFDyCa7UFBTkxTsv3dmTfUg9JYlsGSXyXzzzRPgSuWpZyRabgg2GRcoU1zJXHBcef6NQgpgKKI7GsvoRTxNvWnjcKuatMqVTrSKOi8y8pFfEzWgZlauczf_5DQ1iqKrzQiNTWgLF6GTKsXDh18fiyN9tJjdf2rWYke4A-04netyFzb0xx5s2ZTLrNqH14Ht3oBKn91TY--v2U8VYcUKw-g3xRvVzHrskBi_zzIWFzXl9qDAMDQ1Wb9comn3xmLyp5f1Eh8o6kJ7HMBlOJj0I776oqSRmSr5O6F7CC0k__oImJf2lBsgB1MSsT-XgQm00dRQVjh5cNs7hu66nU7Wv76A7WgyGibDx_HzKXRolLqts_O70KrLhT5DwK3Vub3Vb9DCiHk
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Efficient+Approximations+of+Complete+Interatomic+Potentials+for+Crystal+Property+Prediction&rft.jtitle=arXiv.org&rft.au=Lin%2C+Yuchao&rft.au=Yan%2C+Keqiang&rft.au=Luo%2C+Youzhi&rft.au=Liu%2C+Yi&rft.date=2023-11-07&rft.pub=Cornell+University+Library%2C+arXiv.org&rft.eissn=2331-8422