Standing Together for Reproducibility in Large-Scale Computing: Report on reproducibility@XSEDE

This is the final report on reproducibility@xsede, a one-day workshop held in conjunction with XSEDE14, the annual conference of the Extreme Science and Engineering Discovery Environment (XSEDE). The workshop's discussion-oriented agenda focused on reproducibility in large-scale computational r...

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Main Authors James, Doug, Wilkins-Diehr, Nancy, Stodden, Victoria, Colbry, Dirk, Rosales, Carlos, Fahey, Mark, Shi, Justin, Silva, Rafael F, Lee, Kyo, Roskies, Ralph, Loewe, Laurence, Lindsey, Susan, Kooper, Rob, Barba, Lorena, Bailey, David, Borwein, Jonathan, Corcho, Oscar, Deelman, Ewa, Dietze, Michael, Gilbert, Benjamin, Harkes, Jan, Keele, Seth, Kumar, Praveen, Lee, Jong, Linke, Erika, Marciano, Richard, Marini, Luigi, Mattman, Chris, Mattson, Dave, McHenry, Kenton, McLay, Robert, Miguez, Sheila, Minsker, Barbara, Perez-Hernandez, Maria, Ryan, Dan, Rynge, Mats, Santana-Perez, Idafen, Satyanarayanan, Mahadev, Gloriana St Clair, Webster, Keith, Hovig, Elvind, Katz, Daniel S, Kay, Sophie, Sandve, Geir, Skinner, David, Allen, Gabrielle, Cazes, John, Cho, Kym Won, Fonseca, Jim, Hwang, Lorraine, Koesterke, Lars, Patel, Pragnesh, Pouchard, Line, Seidel, Ed, Suriarachchi, Isuru
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Published Ithaca Cornell University Library, arXiv.org 02.01.2015
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Abstract This is the final report on reproducibility@xsede, a one-day workshop held in conjunction with XSEDE14, the annual conference of the Extreme Science and Engineering Discovery Environment (XSEDE). The workshop's discussion-oriented agenda focused on reproducibility in large-scale computational research. Two important themes capture the spirit of the workshop submissions and discussions: (1) organizational stakeholders, especially supercomputer centers, are in a unique position to promote, enable, and support reproducible research; and (2) individual researchers should conduct each experiment as though someone will replicate that experiment. Participants documented numerous issues, questions, technologies, practices, and potentially promising initiatives emerging from the discussion, but also highlighted four areas of particular interest to XSEDE: (1) documentation and training that promotes reproducible research; (2) system-level tools that provide build- and run-time information at the level of the individual job; (3) the need to model best practices in research collaborations involving XSEDE staff; and (4) continued work on gateways and related technologies. In addition, an intriguing question emerged from the day's interactions: would there be value in establishing an annual award for excellence in reproducible research?
AbstractList This is the final report on reproducibility@xsede, a one-day workshop held in conjunction with XSEDE14, the annual conference of the Extreme Science and Engineering Discovery Environment (XSEDE). The workshop's discussion-oriented agenda focused on reproducibility in large-scale computational research. Two important themes capture the spirit of the workshop submissions and discussions: (1) organizational stakeholders, especially supercomputer centers, are in a unique position to promote, enable, and support reproducible research; and (2) individual researchers should conduct each experiment as though someone will replicate that experiment. Participants documented numerous issues, questions, technologies, practices, and potentially promising initiatives emerging from the discussion, but also highlighted four areas of particular interest to XSEDE: (1) documentation and training that promotes reproducible research; (2) system-level tools that provide build- and run-time information at the level of the individual job; (3) the need to model best practices in research collaborations involving XSEDE staff; and (4) continued work on gateways and related technologies. In addition, an intriguing question emerged from the day's interactions: would there be value in establishing an annual award for excellence in reproducible research?
Author Borwein, Jonathan
Cazes, John
Harkes, Jan
Perez-Hernandez, Maria
Linke, Erika
Sandve, Geir
Loewe, Laurence
Cho, Kym Won
Lindsey, Susan
Marciano, Richard
Minsker, Barbara
Hwang, Lorraine
Katz, Daniel S
Hovig, Elvind
Rynge, Mats
McHenry, Kenton
Marini, Luigi
Fonseca, Jim
Mattson, Dave
Allen, Gabrielle
Lee, Kyo
Kumar, Praveen
McLay, Robert
Lee, Jong
Shi, Justin
Gilbert, Benjamin
Fahey, Mark
Bailey, David
Satyanarayanan, Mahadev
Dietze, Michael
Santana-Perez, Idafen
Pouchard, Line
Barba, Lorena
Deelman, Ewa
James, Doug
Roskies, Ralph
Gloriana St Clair
Kay, Sophie
Seidel, Ed
Mattman, Chris
Wilkins-Diehr, Nancy
Corcho, Oscar
Silva, Rafael F
Koesterke, Lars
Stodden, Victoria
Miguez, Sheila
Ryan, Dan
Patel, Pragnesh
Suriarachchi, Isuru
Rosales, Carlos
Keele, Seth
Webster, Keith
Skinner, David
Colbry, Dirk
Kooper, Rob
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