Bacterial diversity, composition variation in the sediment of Jiaozhou and temporal-spatial Bay, China
Studies on the diversity and distribution of bacterial populations will improve the overall understanding of the global patterns of marine bacteria and help to comprehend local biochemical processes and environments. We evaluated the composition and the dynamics of bacterial communities in the sedim...
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| Published in | 中国海洋湖沼学报：英文版 Vol. 29; no. 3; pp. 576 - 590 |
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| Main Author | |
| Format | Journal Article |
| Language | English |
| Published |
2011
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| Subjects | |
| Online Access | Get full text |
| ISSN | 0254-4059 1993-5005 |
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| Summary: | Studies on the diversity and distribution of bacterial populations will improve the overall understanding of the global patterns of marine bacteria and help to comprehend local biochemical processes and environments. We evaluated the composition and the dynamics of bacterial communities in the sediment of Jiaozhou Bay （China） using PCR-denaturing gradient gel electrophoresis （DGGE）. Sediment samples were collected from 10 different sites in May, August, and November 2008 and in February 2009. There was significant temporal variation in bacterial community composition at all sites. However, the spatial variation was very small. The DGGE analyses of bacterial communities were used to divide the 10 stations into three types. Canonical correspondence analysis （CCA） revealed that the changes in bacterial communities were driven by sediment properties. Sequence analysis of DGGE band-derived 16S rRNA gene fragments revealed that the dominant bacterial groups in the sediment were of the classes ~,-proteobacteria and ~3-proteobacteria and phyla Bacteroidetes and Nitrospirae. Our results provide considerable insight into the bacterial community structure in Jiaozhou Bay, China. |
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| Bibliography: | Studies on the diversity and distribution of bacterial populations will improve the overall understanding of the global patterns of marine bacteria and help to comprehend local biochemical processes and environments. We evaluated the composition and the dynamics of bacterial communities in the sediment of Jiaozhou Bay （China） using PCR-denaturing gradient gel electrophoresis （DGGE）. Sediment samples were collected from 10 different sites in May, August, and November 2008 and in February 2009. There was significant temporal variation in bacterial community composition at all sites. However, the spatial variation was very small. The DGGE analyses of bacterial communities were used to divide the 10 stations into three types. Canonical correspondence analysis （CCA） revealed that the changes in bacterial communities were driven by sediment properties. Sequence analysis of DGGE band-derived 16S rRNA gene fragments revealed that the dominant bacterial groups in the sediment were of the classes ~,-proteobacteria and ~3-proteobacteria and phyla Bacteroidetes and Nitrospirae. Our results provide considerable insight into the bacterial community structure in Jiaozhou Bay, China. 37-1150/P microbial community; denaturing gradient gel electrophoresis （DGGE）; sediment; Jiaozhou Bay LIU Xin, XIAO Tian, LUAN Qingshan , ZHANG Wenyan, WANG Mengqiang, YUE Haidong （1 Key Laboratory of Marine Ecology and Environment, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China 2 Graduate University of Chinese Academy of Sciences, Beijing 100049, China 3 Ocean University of China, Qingdao 266003, China） |
| ISSN: | 0254-4059 1993-5005 |