Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis1[C][W][OA]

The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis (Arabidopsis thaliana), many studies have examined the relationship between histone methylation and gene expression, but few studies exist on the relationship be...

Full description

Saved in:
Bibliographic Details
Published inPlant physiology (Bethesda) Vol. 149; no. 2; pp. 1196 - 1204
Main Authors Schmitz, Robert Jeffrey, Tamada, Yosuke, Doyle, Mark Robert, Zhang, Xiaoyu, Amasino, Richard Mark
Format Journal Article
LanguageEnglish
Published Rockville American Society of Plant Biologists 01.02.2009
Online AccessGet full text

Cover

Loading…
Abstract The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis (Arabidopsis thaliana), many studies have examined the relationship between histone methylation and gene expression, but few studies exist on the relationship between other covalent histone modifications and gene expression. In this work, we describe the role of histone H2B deubiquitination in the activation of gene expression and the consequence of a perturbation of histone H2B deubiquitination in the timing of the floral transition in Arabidopsis. A mutation in a H2B deubiquitinase, UBIQUITIN-SPECIFIC PROTEASE26 (UBP26), results in an early-flowering phenotype. In the ubp26 mutant, mRNA levels of the floral repressor FLOWERING LOCUS C (FLC) and other related family members is decreased. Furthermore, this mutant accumulates H2B monoubiquitination, and has decreased levels of H3K36 trimethylation and increased levels of H3K27 trimethylation at the FLC locus. Thus, UBP26 is required for transcriptional activation of FLC through H2B deubiquitination and is consistent with a model in which deubiquitination is necessary for the accumulation of H3K36 trimethylation and the proper level of transcriptional activation.
AbstractList The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis (Arabidopsis thaliana), many studies have examined the relationship between histone methylation and gene expression, but few studies exist on the relationship between other covalent histone modifications and gene expression. In this work, we describe the role of histone H2B deubiquitination in the activation of gene expression and the consequence of a perturbation of histone H2B deubiquitination in the timing of the floral transition in Arabidopsis. A mutation in a H2B deubiquitinase, UBIQUITIN-SPECIFIC PROTEASE26 (UBP26), results in an early-flowering phenotype. In the ubp26 mutant, mRNA levels of the floral repressor FLOWERING LOCUS C (FLC) and other related family members is decreased. Furthermore, this mutant accumulates H2B monoubiquitination, and has decreased levels of H3K36 trimethylation and increased levels of H3K27 trimethylation at the FLC locus. Thus, UBP26 is required for transcriptional activation of FLC through H2B deubiquitination and is consistent with a model in which deubiquitination is necessary for the accumulation of H3K36 trimethylation and the proper level of transcriptional activation.
The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis ( Arabidopsis thaliana ), many studies have examined the relationship between histone methylation and gene expression, but few studies exist on the relationship between other covalent histone modifications and gene expression. In this work, we describe the role of histone H2B deubiquitination in the activation of gene expression and the consequence of a perturbation of histone H2B deubiquitination in the timing of the floral transition in Arabidopsis. A mutation in a H2B deubiquitinase, UBIQUITIN - SPECIFIC PROTEASE26 ( UBP26 ), results in an early-flowering phenotype. In the ubp26 mutant, mRNA levels of the floral repressor FLOWERING LOCUS C ( FLC ) and other related family members is decreased. Furthermore, this mutant accumulates H2B monoubiquitination, and has decreased levels of H3K36 trimethylation and increased levels of H3K27 trimethylation at the FLC locus. Thus, UBP26 is required for transcriptional activation of FLC through H2B deubiquitination and is consistent with a model in which deubiquitination is necessary for the accumulation of H3K36 trimethylation and the proper level of transcriptional activation.
Author Amasino, Richard Mark
Doyle, Mark Robert
Schmitz, Robert Jeffrey
Tamada, Yosuke
Zhang, Xiaoyu
AuthorAffiliation Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706 (R.J.S., Y.T., M.R.D., R.M.A.); and Department of Plant Biology, University of Georgia, Athens, Georgia 30602 (X.Z.)
AuthorAffiliation_xml – name: Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706 (R.J.S., Y.T., M.R.D., R.M.A.); and Department of Plant Biology, University of Georgia, Athens, Georgia 30602 (X.Z.)
Author_xml – sequence: 1
  givenname: Robert
  surname: Schmitz
  middlename: Jeffrey
  fullname: Schmitz, Robert Jeffrey
– sequence: 2
  givenname: Yosuke
  surname: Tamada
  fullname: Tamada, Yosuke
– sequence: 3
  givenname: Mark
  surname: Doyle
  middlename: Robert
  fullname: Doyle, Mark Robert
– sequence: 4
  givenname: Xiaoyu
  surname: Zhang
  fullname: Zhang, Xiaoyu
– sequence: 5
  givenname: Richard
  surname: Amasino
  middlename: Mark
  fullname: Amasino, Richard Mark
BookMark eNpVkE1PwzAMhiMEgm1w5B5x38hH0yYXpFFgm1QxNIY4TFOVtilk6pKStCD-Cr-Wju2CfLDl9_Uj231wbKxRAFxiNMIYBdd1PcKIjzDFDPEj0MOMkiFhAT8GPYS6GnEuzkDf-w1CqLMFp-AMCyQwj1gP_Ey1bzoinJJbeKfaTH-0utFGNtoaOPNwobqGUwUsrYNLJ43Pna53qqzgOG_0595qS_iQzF_vF7PHCUzm8cszjKE0-7knZ2vlYGxN42z1563sl3LavEFt4NjJTBe29trjVbxeva5X8_H6HJyUsvLq4pAHYPlwv4ynw2Q-mcXjZFhzQoeCRVLwiNCiu0gWhIRMhlgGUZYFgu5CllGRlyjPUZizUgmiyoKiQvJcRCyjA3Czx9ZttlVFrrodZZXWTm-l-06t1Ol_xej39M1-piSklAe0A1wdAM5-tMo36ca2rnuPTwnmTASMh_QXpWaEFw
ContentType Journal Article
Copyright Copyright American Society of Plant Biologists Feb 2009
Copyright © 2009, American Society of Plant Biologists
Copyright_xml – notice: Copyright American Society of Plant Biologists Feb 2009
– notice: Copyright © 2009, American Society of Plant Biologists
DBID 3V.
4T-
7X2
7X7
7XB
88A
88E
88I
8AF
8AO
8FE
8FH
8FI
8FJ
8FK
8G5
ABUWG
AFKRA
ATCPS
AZQEC
BBNVY
BENPR
BHPHI
CCPQU
DWQXO
FYUFA
GHDGH
GNUQQ
GUQSH
HCIFZ
K9.
LK8
M0K
M0S
M1P
M2O
M2P
M7P
MBDVC
PQEST
PQQKQ
PQUKI
Q9U
S0X
5PM
DOI 10.1104/pp.108.131508
DatabaseName ProQuest Central (Corporate)
Docstoc
Agricultural Science Collection
ProQuest_Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Biology Database (Alumni Edition)
Medical Database (Alumni Edition)
Science Database (Alumni Edition)
STEM Database
ProQuest Pharma Collection
ProQuest SciTech Collection
ProQuest Natural Science Collection
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
Research Library (Alumni Edition)
ProQuest Central (Alumni)
ProQuest Central
ProQuest Agriculture & Environmental Science Database
ProQuest Central Essentials
Biological Science Collection
AUTh Library subscriptions: ProQuest Central
ProQuest Natural Science Collection
ProQuest One Community College
ProQuest Central
Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
Research Library Prep
SciTech Premium Collection (Proquest) (PQ_SDU_P3)
ProQuest Health & Medical Complete (Alumni)
Biological Sciences
Agriculture Science Database
Health & Medical Collection (Alumni Edition)
PML(ProQuest Medical Library)
ProQuest research library
Science Database (ProQuest)
Biological Science Database
Research Library (Corporate)
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central Basic
SIRS Editorial
PubMed Central (Full Participant titles)
DatabaseTitle Agricultural Science Database
Research Library Prep
ProQuest Central Student
ProQuest Central Essentials
SIRS Editorial
ProQuest Health & Medical Complete (Alumni)
ProQuest AP Science
ProQuest Central (Alumni Edition)
SciTech Premium Collection
ProQuest One Community College
Research Library (Alumni Edition)
ProQuest Natural Science Collection
ProQuest Pharma Collection
ProQuest Biology Journals (Alumni Edition)
ProQuest Central
Health Research Premium Collection
Health and Medicine Complete (Alumni Edition)
Natural Science Collection
ProQuest Central Korea
Agricultural & Environmental Science Collection
Biological Science Collection
ProQuest Research Library
ProQuest Medical Library (Alumni)
ProQuest Science Journals (Alumni Edition)
ProQuest Biological Science Collection
ProQuest Central Basic
ProQuest Science Journals
ProQuest One Academic Eastern Edition
Agricultural Science Collection
ProQuest Hospital Collection
Health Research Premium Collection (Alumni)
Biological Science Database
ProQuest SciTech Collection
ProQuest Hospital Collection (Alumni)
ProQuest Health & Medical Complete
ProQuest Medical Library
ProQuest One Academic UKI Edition
Docstoc
ProQuest One Academic
ProQuest Central (Alumni)
DatabaseTitleList Agricultural Science Database

Database_xml – sequence: 1
  dbid: BENPR
  name: AUTh Library subscriptions: ProQuest Central
  url: https://www.proquest.com/central
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Botany
EISSN 1532-2548
EndPage 1204
ExternalDocumentID 1647390891
GroupedDBID ---
-DZ
-~X
0R~
123
29O
2AX
2WC
2~F
3V.
4.4
4T-
53G
5VS
5WD
7X2
7X7
7XB
85S
88A
88E
88I
8AF
8AO
8CJ
8FE
8FH
8FI
8FJ
8FK
8FW
8G5
8R4
8R5
AAHBH
AAHKG
AAPXW
AARHZ
AAUAY
AAVAP
AAXTN
AAYJJ
ABBHK
ABJNI
ABMNT
ABPLY
ABPPZ
ABPTD
ABTLG
ABUWG
ABXSQ
ABXVV
ACBTR
ACGOD
ACNCT
ACPRK
ACUFI
ADACV
ADBBV
ADIPN
ADIYS
ADQBN
ADULT
ADVEK
ADYHW
AEEJZ
AENEX
AEUPB
AFAZZ
AFFZL
AFGWE
AFKRA
AFRAH
AGUYK
AHMBA
AHXOZ
AICQM
AJEEA
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AQVQM
AS~
ATCPS
ATGXG
AZQEC
BAWUL
BBNVY
BCRHZ
BENPR
BEYMZ
BHPHI
BPHCQ
BTFSW
BVXVI
C1A
CBGCD
CCPQU
CS3
D1J
DATOO
DIK
DOOOF
DU5
DWQXO
E3Z
EBS
EJD
F20
F5P
FLUFQ
FOEOM
FYUFA
GNUQQ
GTFYD
GUQSH
H13
HCIFZ
HMCUK
HTVGU
IPSME
ISR
JAAYA
JBMMH
JBS
JENOY
JHFFW
JKQEH
JLS
JLXEF
JPM
JSODD
JST
K9.
KOP
KQ8
KSI
KSN
LK8
M0K
M0L
M1P
M2O
M2P
M2Q
M7P
MBDVC
MV1
MVM
NOMLY
OBOKY
OJZSN
OK1
OWPYF
P2P
PQEST
PQQKQ
PQUKI
PROAC
PSQYO
Q2X
Q9U
RHF
RHI
ROX
RPB
RPM
RWL
RXW
S0X
SA0
TAE
TN5
TR2
UKHRP
VQA
W8F
WH7
WOQ
XSW
YBU
YKV
YNT
YSK
YZZ
ZCA
ZCN
~02
~KM
5PM
AASNB
ID FETCH-LOGICAL-p823-957a98723d918ad2265a61a47bb4939393af7dcf0cc06c5fe92efd30da8c975b3
IEDL.DBID BENPR
ISSN 0032-0889
IngestDate Tue Sep 17 21:17:01 EDT 2024
Thu Oct 10 21:02:09 EDT 2024
IsPeerReviewed true
IsScholarly true
Issue 2
Language English
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-p823-957a98723d918ad2265a61a47bb4939393af7dcf0cc06c5fe92efd30da8c975b3
Notes Some figures in this article are displayed in color online but in black and white in the print edition.
This work was supported by the College of Agricultural and Life Sciences and the Graduate School of the University of Wisconsin (National Institutes of Health grant no. 1R01GM079525 and National Science Foundation grant no. 0209786 [to R.M.A.]).
Corresponding author; e-mail amasino@biochem.wisc.edu.
These authors contributed equally to the article.
The author responsible for the distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Richard Mark Amasino (amasino@biochem.wisc.edu).
Open access articles can be viewed online without a subscription.
Present address: Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037.
The online version of this article contains Web-only data.
www.plantphysiol.org/cgi/doi/10.1104/pp.108.131508
PMID 19091875
PQID 218594586
PQPubID 40931
PageCount 9
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_2633843
proquest_journals_218594586
PublicationCentury 2000
PublicationDate 20090201
PublicationDateYYYYMMDD 2009-02-01
PublicationDate_xml – month: 02
  year: 2009
  text: 20090201
  day: 01
PublicationDecade 2000
PublicationPlace Rockville
PublicationPlace_xml – name: Rockville
PublicationTitle Plant physiology (Bethesda)
PublicationYear 2009
Publisher American Society of Plant Biologists
Publisher_xml – name: American Society of Plant Biologists
SSID ssj0001314
Score 1.9559065
Snippet The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis (Arabidopsis...
The spectrum of histone modifications at a given locus is a critical determinant for the correct output of gene expression. In Arabidopsis ( Arabidopsis...
SourceID pubmedcentral
proquest
SourceType Open Access Repository
Aggregation Database
StartPage 1196
Title Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis1[C][W][OA]
URI https://www.proquest.com/docview/218594586
https://pubmed.ncbi.nlm.nih.gov/PMC2633843
Volume 149
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV3JTsMwELXYDlwQq9jlA1eDE2_JCdFAVdYiFlGpqipvEZFQGkh74Ff4WuwkregF5WTFthI7mXmeeXoDwAnFROlYKURlyBFljCPnRiTi0rDUaC5JldG9f-CdV3rTY72Gm1M2tMqpTawMtRlpHyM_c66IxZRF_Lz4RL5olE-uNhU0FsFyGFCfpV1uXT08Ps1McUBqcW9MQuT5PDORTXpWFJ5ed-p6MBzNwct5cuQfb9NeB2sNTIQX9b5ugAWbb4KV1shBue8t8FOJe-QWdsIWvLQTlX1OsnFWB_bgdQmfrCf4WgMdJIWVO5oaBz-pnpY0g6MUtu-6b5WuFLzrJq_PMIEyr8c9-jj9F0xqMnvV98PXVHPODma5ezapMjMqyqwM-smg_zbody8G2-ClffWSdFBTZAEVUUhQzISMIxESEweRNA6MMckDSYVSNCb-kqkwOsVaY14x00KbGoKNjHQsmCI7YCl3L7wLIGbWYUHLA00Z5VhJY4U7zGBstdVpSvbAwXSRh82PUg5n27oHxNy6D4tabWPo9a_n7-TZe6WDHXJ3vqZk_995D8BqnQDyDJRDsDT-mtgjhyPG6hgsip44br4Z17q8vv0F9w3NHA
link.rule.ids 230,315,786,790,891,12083,21416,27955,27956,31752,33777,43343,43838,74100,74657
linkProvider ProQuest
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1bT9swFLYGQ2IvE-MiCmPzA68GN74keUKQUbVbSxEUUamqIt8iIk1p2rQP-yv7tbOdtKIvUx7jWIntnPOdcz59B4BLiolUsZSIioAjyhhH1o0IxIVmmVZcEF_RHTzw7gv9OWbjhptTNbTKtU30hlrPlMuRX1tXxGLKIn5TzpFrGuWKq00HjR3wkRJC3TEPx5t4yynJ1CLMJECOzbOR2KTXZenIdVd2BMPRFrjcpka-8zWdA_C5AYnwtt7VL-CDKQ7B3t3MArk_R-Cvl_YoDOwGd_CHWcl8vsqXeZ3Wg70KPhlH7zUaWkAKvTNamwY3qVo3NIOzDHb6w1evKgX7w-TlGSZQFPVzjy5Lv4BJTWX3Y3-7jmrW1cG8sO8mZK5nZZVX7UkynbxOJ8Pb6TEYde5HSRc1LRZQGQUExSwUcRQGRMftSGgLxZjgbUFDKWlM3CWyUKsMK4W556UFJtMEaxGpOGSSnIDdwn7wKYCYGYsEDW8ryijHUmgT2lAGY6OMyjLSAufrRU6b36RKN5vaAuHWuqdlrbWROvXr7TtF_uZVsANuo2tKzv4773ew3x0N-mm_9_DrHHyqS0GOi_IV7C4XK3NhEcVSfvPn5h-h2czD
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1LT-MwELZYQCsuK56C5eUDV1M3fiQ5rSBQFSgU8RCVqiryKyLSKg2kPfBX-LXYTlrRC8oxjpXYzsw3M5--AeCEYiJVLCWiIuCIMsaRdSMCcaFZphUXxFd0b-9495leD9igkRSqGlrlzCZ6Q63HyuXIW9YVsZiyiLeyhhVxf9H5V74h10DKFVqbbhq_wIp1kth1cQgH89jLqcrUgswkQI7ZM5fbpK2ydES7UzuC4WgBaC7SJL_5nc46-NMARnhW7_AGWDLFJlg9H1tQ97EFPr3MR2FgNziHF2Yq87dpPsnrFB-8quCDcVRfo6EFp9A7ppmZcJOqWXMzOM5gp9d_8QpTsNdPnh9hAkVRP3fvMvbvMKlp7X7sf9ddzbo9mBf23YTM9bis8qo9TEbDl9GwfzbaBk-dy6eki5p2C6iMAoJiFoo4CgOi43YktIVlTPC2oKGUNCbuElmoVYaVwtxz1AKTaYK1iFQcMkl2wHJhP3gXQMyMRYWGtxVllGMptAltWIOxUUZlGdkD-7NFTptfpkrnG7wHwoV1T8tadyN1StiLd4r81StiB9xG2pT8_XHeY_DbHpm0d3V3sw_W6qqQo6UcgOXJ-9QcWnAxkUf-2HwB1ZHQ7w
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Histone+H2B+Deubiquitination+Is+Required+for+Transcriptional+Activation+of+FLOWERING+LOCUS+C+and+for+Proper+Control+of+Flowering+in+Arabidopsis1%5BC%5D%5BW%5D%5BOA%5D&rft.jtitle=Plant+physiology+%28Bethesda%29&rft.au=Schmitz%2C+Robert+Jeffrey&rft.au=Tamada%2C+Yosuke&rft.au=Doyle%2C+Mark+Robert&rft.au=Zhang%2C+Xiaoyu&rft.date=2009-02-01&rft.pub=American+Society+of+Plant+Biologists&rft.issn=0032-0889&rft.eissn=1532-2548&rft.volume=149&rft.issue=2&rft.spage=1196&rft_id=info:doi/10.1104%2Fpp.108.131508&rft.externalDBID=HAS_PDF_LINK&rft.externalDocID=1647390891
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0032-0889&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0032-0889&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0032-0889&client=summon