Cloning and analysis of cross-intron genomic gene encoding ACO in Paeonia sujfruticosa Andr

• Published in: Forestry studies in China Vol. 14; no. 4; pp. 291 - 298
• Main Authors: Fan, Bing-You, Gao, Shui-Ping, Hou, Xiao-Gai, Shi, Guo-An, Kong, Xiang-Sheng
• Format: Journal Article
• Language: English
• Published: 01.12.2012
• Subjects: Amino acids; Cloning; Deoxyribonucleic acid; Encoding; Ethylene; Genes; Oxidase; Paeonia; Trees
• ISSN: 1008-1321
• DOI: 10.1007/s11632-012-0403-z

The last step of ethylene biosynthesis in higher plants is to convert 1-aminocyclopropane-l-carboxylic acid (ACC) to ethylene by ACC oxidase (ACO). In our investigation, a cross-introns genomic DNA gene encoding ACC oxidase, PsgACO, was isolated from Paeonia sujfruticosa. It revealed that PsgACO (FJ855434) has 1281 bases, containing four exons and three introns, encoding 312 amino acids. The four exons stretched from 1 to 105, 217 to 434, 592 to 925 and 1000 to 1281 bases. A splicing junction sequence of all the exon-introns conformed to the GT-AG rule in the cross-intron genomic DNA sequence of the ACO gene. PsgACO showed high homology to many characterized ACC oxidases both at the nucleic acid and amino acid levels. As well, twelve amino acid residues were conserved among many ACOs from other species. A phylogenetic tree analysis indicated that the amino acid of ACOs is quite conserved among the different eudicots. The phylogenetic tree showed that both the tree peony and herbaceous peony are quite isolated taxa. Bioinformatic analysis showed that the molecular weight of ACO is 35.29 kD, with a theoretical pl of 5.25. It is a non-secrete, stable hydrophilic protein, located in the cytoplasm.