Semi-supervised Transfer Learning for Infant Cerebellum Tissue Segmentation

• Published in: Machine Learning in Medical Imaging Vol. 12436; pp. 663 - 673
• Main Authors: Sun, Yue, Gao, Kun, Niu, Sijie, Lin, Weili, Li, Gang, Wang, Li
• Format: Book Chapter Journal Article
• Language: English
• Published: Switzerland Springer International Publishing AG 01.01.2020; Springer International Publishing
• Series: Lecture Notes in Computer Science
• Subjects: Confidence map; Infant cerebellum segmentation; Semi-supervised learning; Infant cerebellum segmentation; Confidence map; Semi-supervised learning
• ISBN: 9783030598600; 3030598608
• ISSN: 0302-9743; 1611-3349
• DOI: 10.1007/978-3-030-59861-7_67

To characterize early cerebellum development, accurate segmentation of the cerebellum into white matter (WM), gray matter (GM), and cerebrospinal fluid (CSF) tissues is one of the most pivotal steps. However, due to the weak tissue contrast, extremely folded tiny structures, and severe partial volume effect, infant cerebellum tissue segmentation is especially challenging, and the manual labels are hard to obtain and correct for learning-based methods. To the best of our knowledge, there is no work on the cerebellum segmentation for infant subjects less than 24 months of age. In this work, we develop a semi-supervised transfer learning framework guided by a confidence map for tissue segmentation of cerebellum MR images from 24-month-old to 6-month-old infants. Note that only 24-month-old subjects have reliable manual labels for training, due to their high tissue contrast. Through the proposed semi-supervised transfer learning, the labels from 24-month-old subjects are gradually propagated to the 18-, 12-, and 6-month-old subjects, which have a low tissue contrast. Comparison with the state-of-the-art methods demonstrates the superior performance of the proposed method, especially for 6-month-old subjects.