Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression

• Published in: Machine Learning in Medical Imaging Vol. 8679; pp. 68 - 76
• Main Authors: Yang, Zhen, Zhong, Shenghua, Carass, Aaron, Ying, Sarah H., Prince, Jerry L.
• Format: Book Chapter Journal Article
• Language: English
• Published: Switzerland Springer International Publishing AG 2014; Springer International Publishing
• Series: Lecture Notes in Computer Science
• Subjects: Health & safety aspects of computing; Image processing; Pattern recognition
• ISBN: 3319105809; 9783319105802
• ISSN: 0302-9743; 1611-3349
• DOI: 10.1007/978-3-319-10581-9_9

Cerebellar ataxia is a progressive neuro-degenerative disease that has multiple genetic versions, each with a characteristic pattern of anatomical degeneration that yields distinctive motor and cognitive problems. Studying this pattern of degeneration can help with the diagnosis of disease subtypes, evaluation of disease stage, and treatment planning. In this work, we propose a learning framework using MR image data for discriminating a set of cerebellar ataxia types and predicting a disease related functional score. We address the difficulty in analyzing high-dimensional image data with limited training subjects by: 1) training weak classifiers/regressors on a set of image subdomains separately, and combining the weak classifier/regressor outputs to make the decision; 2) perturbing the image subdomain to increase the training samples; 3) using a deep learning technique called the stacked auto-encoder to develop highly representative feature vectors of the input data. Experiments show that our approach can reliably classify between one of four categories (healthy control and three types of ataxia), and predict the functional staging score for ataxia.