Web-Beagle: a web server for the alignment of RNA secondary structures

• Published in: Nucleic acids research Vol. 43; no. W1; pp. W493 - W497
• Main Authors: Mattei, Eugenio, Pietrosanto, Marco, Ferrè, Fabrizio, Helmer-Citterich, Manuela
• Format: Journal Article
• Language: English
• Published: England Oxford University Press 01.07.2015
• Subjects: Algorithms; Internet; Nucleic Acid Conformation; RNA - chemistry; Sequence Alignment; Sequence Analysis, RNA; Software; Web Server issue

Web-Beagle (http://beagle.bio.uniroma2.it) is a web server for the pairwise global or local alignment of RNA secondary structures. The server exploits a new encoding for RNA secondary structure and a substitution matrix of RNA structural elements to perform RNA structural alignments. The web server...