Metabolomic Analysis of Toxoplasma gondii Tachyzoites
This protocol describes the use of C-stable isotope labeling, combined with metabolite profiling, to investigate the metabolism of the tachyzoite stage of the protozoan parasite Toxoplasma gondii. T. gondii tachyzoites can infect any nucleated cell in their vertebrate (including human) hosts, and ut...
Saved in:
Published in | Methods in molecular biology (Clifton, N.J.) Vol. 2071; p. 435 |
---|---|
Main Authors | , , , , |
Format | Journal Article |
Language | English |
Published |
United States
01.01.2020
|
Subjects | |
Online Access | Get more information |
Cover
Loading…
Abstract | This protocol describes the use of
C-stable isotope labeling, combined with metabolite profiling, to investigate the metabolism of the tachyzoite stage of the protozoan parasite Toxoplasma gondii. T. gondii tachyzoites can infect any nucleated cell in their vertebrate (including human) hosts, and utilize a range of carbon sources that freely permeate across the limiting membrane of the specialized vacuole within which they proliferate. Methods for cultivating tachyzoites in human foreskin fibroblasts and metabolically labeling intracellular and naturally egressed tachyzoites with a range of
C-labeled carbon sources are described. Parasites are harvested and purified from host metabolites, with rapid metabolic quenching and
C-enrichment in intracellular polar metabolites quantified by gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS). The mass isotopomer distribution of key metabolites is determined using DExSI software. This method can be used to measure perturbations in parasite metabolism induced by drug inhibition or genetic manipulation of enzyme levels and is broadly applicable to other cultured or intracellular parasite stages. |
---|---|
AbstractList | This protocol describes the use of
C-stable isotope labeling, combined with metabolite profiling, to investigate the metabolism of the tachyzoite stage of the protozoan parasite Toxoplasma gondii. T. gondii tachyzoites can infect any nucleated cell in their vertebrate (including human) hosts, and utilize a range of carbon sources that freely permeate across the limiting membrane of the specialized vacuole within which they proliferate. Methods for cultivating tachyzoites in human foreskin fibroblasts and metabolically labeling intracellular and naturally egressed tachyzoites with a range of
C-labeled carbon sources are described. Parasites are harvested and purified from host metabolites, with rapid metabolic quenching and
C-enrichment in intracellular polar metabolites quantified by gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS). The mass isotopomer distribution of key metabolites is determined using DExSI software. This method can be used to measure perturbations in parasite metabolism induced by drug inhibition or genetic manipulation of enzyme levels and is broadly applicable to other cultured or intracellular parasite stages. |
Author | Cobbold, Simon A King, Elizabeth F B Tonkin, Christopher J Uboldi, Alessandro D McConville, Malcolm J |
Author_xml | – sequence: 1 givenname: Elizabeth F B surname: King fullname: King, Elizabeth F B organization: Department of Biochemistry and Molecular Biology, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia – sequence: 2 givenname: Simon A surname: Cobbold fullname: Cobbold, Simon A organization: Department of Biochemistry and Molecular Biology, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia – sequence: 3 givenname: Alessandro D surname: Uboldi fullname: Uboldi, Alessandro D organization: Department of Medical Biology, The University of Melbourne, Parkville, Victoria 3010, Australia – sequence: 4 givenname: Christopher J surname: Tonkin fullname: Tonkin, Christopher J organization: Division of Infectious Disease and Immune Defense, The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia – sequence: 5 givenname: Malcolm J surname: McConville fullname: McConville, Malcolm J email: malcolmm@unimelb.edu.au organization: Department of Biochemistry and Molecular Biology, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Parkville, Victoria 3010, Australia. malcolmm@unimelb.edu.au |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/31758465$$D View this record in MEDLINE/PubMed |
BookMark | eNo1jstKxDAUQIMozkP_QKQ_EE1uHrdZDoOOwoibui63TaqRtimTCo5fr6DCgbM7nBU7HdMYGLuS4kYKgbcOSy65dspxVxrkrgY4YUvptOBWgFuwVc7vQmhUoM_ZQkk0pbZmycxTmKlJfRpiW2xG6o855iJ1RZU-09RTHqh4TaOPsaiofTt-pTiHfMHOOupzuPzzmr3c31XbB75_3j1uN3s-gdEzxy4Ib6iUWqHBjkBZ9KX7oQV0wngL1qJuFHhFxgeSjdVA1CqSQWgPa3b9250-miH4ejrEgQ7H-v8fvgF_fkfw |
ContentType | Journal Article |
DBID | CGR CUY CVF ECM EIF NPM |
DOI | 10.1007/978-1-4939-9857-9_22 |
DatabaseName | Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) |
DatabaseTitleList | MEDLINE |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | no_fulltext_linktorsrc |
Discipline | Biology |
EISSN | 1940-6029 |
ExternalDocumentID | 31758465 |
Genre | Journal Article |
GroupedDBID | --- 29M 53G ACGFS ALMA_UNASSIGNED_HOLDINGS CGR CUY CVF ECM EIF F5P NPM P2P RSU SPO UDS WH7 ZGI |
ID | FETCH-LOGICAL-p254t-7fe0d5a8143757fa2367d89d89c27905d626674b32d3a5dea1b642aac3a1e04d2 |
IngestDate | Thu May 23 23:41:35 EDT 2024 |
IsPeerReviewed | false |
IsScholarly | true |
Keywords | Metabolomics 13C-flux analysis Toxoplasmosis Intracellular pathogen Mass spectrometry |
Language | English |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-p254t-7fe0d5a8143757fa2367d89d89c27905d626674b32d3a5dea1b642aac3a1e04d2 |
PMID | 31758465 |
ParticipantIDs | pubmed_primary_31758465 |
PublicationCentury | 2000 |
PublicationDate | 2020-01-01 |
PublicationDateYYYYMMDD | 2020-01-01 |
PublicationDate_xml | – month: 01 year: 2020 text: 2020-01-01 day: 01 |
PublicationDecade | 2020 |
PublicationPlace | United States |
PublicationPlace_xml | – name: United States |
PublicationTitle | Methods in molecular biology (Clifton, N.J.) |
PublicationTitleAlternate | Methods Mol Biol |
PublicationYear | 2020 |
SSID | ssj0047324 |
Score | 2.3397336 |
Snippet | This protocol describes the use of
C-stable isotope labeling, combined with metabolite profiling, to investigate the metabolism of the tachyzoite stage of the... |
SourceID | pubmed |
SourceType | Index Database |
StartPage | 435 |
SubjectTerms | Animals Chromatography, Liquid Fibroblasts - parasitology Foreskin - cytology Gas Chromatography-Mass Spectrometry Humans Male Mass Spectrometry Metabolomics Software Toxoplasma - metabolism Toxoplasma - pathogenicity Toxoplasmosis |
Title | Metabolomic Analysis of Toxoplasma gondii Tachyzoites |
URI | https://www.ncbi.nlm.nih.gov/pubmed/31758465 |
Volume | 2071 |
hasFullText | |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1bS8MwFA5TUfYi3u_SB99GpWuTpX0UcYiwvdjB3ka6JDpw7WAV1Ed_uSdNYuNUvMAoWwKl7TlLv3NyzvchdEaJ7PA4ZD5hDPsY3hF-gqOOLygmMgg5ZW3VnNzrd64H-GZIho3Gq1O19Fhm5-OXL_tK_mNVGAO7qi7ZP1j2_aQwAN_BvnAEC8PxVzbuiRJs-KAaiz-wi6TFUzEDWDxlrbsi55NJK2Xj--eXAvDl3IWjvUo_uiqJnVqd3JblZdL7u7K0LVk3507awGqhvJeFtbq1gPNlkVk16lvwhbxOmA7U-MR01sznTNEl1EXHaZEbdTCH88BsXJnMRBg4mQmhV9NE9RYE5trMchsGWnPFrJhYs5V8Wsnr4g2IcZMo8RNFWpWMdBezY9zZtLKuwkGApcjPswv82nZqCS3RWIl_9FW-R7_LMQW86TRcfnU5TbRmT7EQmlQQJd1A6ya28C60o2yihsi30KpWG33eRsRxF8-6i1dIr3YXT7uL57jLDhp0r9LLa9-oZvgzCPZLn0oRcMJiAMKUUMkURR-PE_iMQ8XGxiGE7VCcRSGPGOGCtTOIQRkbR6wtAszDXbScF7nYR57a9JUR3K2gAGIyEmdtSeB3nEVYAu49QHv6fkczTY0ysk_i8NuZI9SsfeUYrUj4L4oTAHZldlo9-zfmZEgS |
link.rule.ids | 780 |
linkProvider | National Library of Medicine |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Metabolomic+Analysis+of+Toxoplasma+gondii+Tachyzoites&rft.jtitle=Methods+in+molecular+biology+%28Clifton%2C+N.J.%29&rft.au=King%2C+Elizabeth+F+B&rft.au=Cobbold%2C+Simon+A&rft.au=Uboldi%2C+Alessandro+D&rft.au=Tonkin%2C+Christopher+J&rft.date=2020-01-01&rft.eissn=1940-6029&rft.volume=2071&rft.spage=435&rft_id=info:doi/10.1007%2F978-1-4939-9857-9_22&rft_id=info%3Apmid%2F31758465&rft_id=info%3Apmid%2F31758465&rft.externalDocID=31758465 |