Modeling participant-related clinical research events using conceptual knowledge acquisition techniques

The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. H...

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Published inAMIA ... Annual Symposium proceedings Vol. 2007; pp. 593 - 597
Main Authors Payne, Philip R O, Mendonca, Eneida A, Starren, Justin B
Format Journal Article
LanguageEnglish
Published United States American Medical Informatics Association 11.10.2007
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ISSN1942-597X
1559-4076

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Abstract The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. However, such approaches do not address the need for a more granular computational model of the individual events that comprise each visit. To address the preceding gap in knowledge, this paper will describe a study in which conceptual knowledge acquisition (CKA) techniques were applied to a corpus of 32 clinical trials protocol documents in order to develop a knowledge collection of common participant-related clinical research events. These techniques identified 7 high-level concepts that could be used as organizing principles in the resulting knowledge collection. Such results confirm the utility of CKA methods in the clinical research domain.
AbstractList The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. However, such approaches do not address the need for a more granular computational model of the individual events that comprise each visit. To address the preceding gap in knowledge, this paper will describe a study in which conceptual knowledge acquisition (CKA) techniques were applied to a corpus of 32 clinical trials protocol documents in order to develop a knowledge collection of common participant-related clinical research events. These techniques identified 7 high-level concepts that could be used as organizing principles in the resulting knowledge collection. Such results confirm the utility of CKA methods in the clinical research domain.
The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. However, such approaches do not address the need for a more granular computational model of the individual events that comprise each visit. To address the preceding gap in knowledge, this paper will describe a study in which conceptual knowledge acquisition (CKA) techniques were applied to a corpus of 32 clinical trials protocol documents in order to develop a knowledge collection of common participant-related clinical research events. These techniques identified 7 high-level concepts that could be used as organizing principles in the resulting knowledge collection. Such results confirm the utility of CKA methods in the clinical research domain.The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. However, such approaches do not address the need for a more granular computational model of the individual events that comprise each visit. To address the preceding gap in knowledge, this paper will describe a study in which conceptual knowledge acquisition (CKA) techniques were applied to a corpus of 32 clinical trials protocol documents in order to develop a knowledge collection of common participant-related clinical research events. These techniques identified 7 high-level concepts that could be used as organizing principles in the resulting knowledge collection. Such results confirm the utility of CKA methods in the clinical research domain.
Author Mendonca, Eneida A
Starren, Justin B
Payne, Philip R O
AuthorAffiliation 2 Columbia University, Department of Biomedical Informatics, New York, NY
3 Marshfield Clinic Research Foundation, Marshfield, WI
1 The Ohio State University, Department of Biomedical Informatics, Columbus, OH
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– reference: 15974245 - J Investig Med. 2005 May;53(4):192-200
– reference: 12463951 - Proc AMIA Symp. 2002;:879-83
– reference: 11126691 - Ann Acad Med Singapore. 2000 Sep;29(5):576-81
– reference: 11523076 - Stat Med. 2001 Sep 15-30;20(17-18):2683-96
– reference: 17134616 - J Investig Med. 2006 Sep;54(6):327-33
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SubjectTerms Abstracting and Indexing as Topic - methods
Algorithms
Artificial Intelligence
Clinical Protocols
Clinical Trials as Topic
Humans
Subject Headings
Unified Medical Language System
Title Modeling participant-related clinical research events using conceptual knowledge acquisition techniques
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