Discovery of gene regulatory networks via in silico analysis and their application in abiotic stress responses

• Published in: Korean journal of breeding Vol. 39; no. 4; pp. 464 - 472
• Main Authors: Won Cheol Yim, Cheol Seong Jang
• Format: Journal Article
• Language: Korean
• Published: 한국육종학회 30.12.2007; The Korean Breeding Society
• Subjects: 농학; Gene regulatory network; Cis-element; Clustering; Abiotic stress; Co-expressing gene; cis-element; clustering; co-expressing gene; gene regulatory network; abiotic stress

In order to uncover gene regulatory networks clustering of co-expressing genes was performed using a rice micorarray dataset of 155 gene expression omnibus sample (GSM) plates in NCBI, generating a total of 1660 clusters. One cluster with 85 co-expressing genes was measured with the correlation coef...