個別化医療とバイオインフォマティックス
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| Published in | 生体医工学 Vol. 44; no. 3; pp. 422 - 427 |
|---|---|
| Main Author | |
| Format | Journal Article |
| Language | Japanese |
| Published |
公益社団法人 日本生体医工学会
2006
|
| Online Access | Get full text |
| ISSN | 1347-443X 1881-4379 |
| DOI | 10.11239/jsmbe.44.422 |
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| Author | 鎌谷, 直之 |
|---|---|
| Author_xml | – sequence: 1 fullname: 鎌谷, 直之 organization: 東京女子医科大学膠原病リウマチ痛風センター 東京女子医科大学大学院先端生命医科学系専攻遺伝子医学分野 |
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| Copyright | 2006 社団法人日本生体医工学会 |
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| Discipline | Engineering |
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| EndPage | 427 |
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| References | 10. Iwamoto T, Ikari K, Nakamura T, Kuwahara M, Toyama Y, Tomatsu T, Momohara S, Kamatani N: Association between PADI4 and rheumatoid arthritis: a meta-analysis. Rheumatology. 45: 804-807, 2006. 11. Benjamini and Y Hochberg: Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. J. Roy Stat Soc, Ser B. 57: 289-300, 1995. 18. Kamatani N, Sekine A, Kitamoto T, Iida A, Saito S, Kogame A, Inoue E, Kawamoto M, Harigai M, Nakamura Y: Large-scale single-nucleotide polymorphism(SNP) and haplotype analyses, using dense SNP Maps, of 199 drug-related genes in 752 subjects: the analysisof the association between uncommon SNPs within haplotype blocks and the haplotypes constructed with haplotype-tagging SNPs. Am J Hum Genet. 75: 190-203, 2004. 24. Yamada T, Okuda Y, Takasugi K, Wang L, Marks D, Benson MD, Kluve-Beckerman B: An allele of serum amyloid A1 associated with amyloidosis in both Japanese and Caucasians. Amyloid. 10(1): 7-11, 2003. 3. Evans DAP, Manley K, McKusick VA: Genetic control of isoniazid metabolism in man. Br Med J. 5197: 485-491, 1960. 4. Vessel ES, Page JG: Genetic control of drug levels in man: phenylbutazone. Science. 159(822): 1479-1480, 1968. 7. International HapMap Consortium: Integrating ethics and science in the International HapMap Project. Nat Rev Genet. 5: 467, 2004. 21. Tanaka E, Taniguchi A, Urano W, Nakajima H, Matsuda Y, Kitamura Y, Saito M, Yamanaka H, Saito T, Kamatani N: Adverse effects of sulphasalazine in rheumatoid arthritis patients are associated with diplotype configuration at N-actyltransferase 2 gene. J Rheumatol. 29: 2492-2499, 2002. 15. Ito T, Chiku S, Inoue E, Tomita M, Morisaki T, Morisaki H, Kamatani N: Estimation of haplotype frequencies, linkage disequilibrium measures and combination of haplotype copies in each pool using pooled DNA data. Am J Hum Genet. 72: 384-398, 2003. 1. Beutler E, Mathai CK, Smith JE: Biochemical variants of glucose-6-phosphate dehydrogenase giving rise to congenital nonspherocytic hemolytic disease. Blood. 31(2): 131-150, 1968. 22. Van Ede AE, Laan RF, Blom HJ, Huizinga TW, Haagsma CJ, Giesendorf BA, de Boo TM, van de Putte LB: The C677T mutation in the methylenetetrahydrofolate reductase gene: a genetic risk factor for methotrexate-related elevation of liver enzymes in rheumatoid arthritis patients. Arthritis Rheum. 44(11): 2525-2530, 2001. 8. Lazarou J, Pomeranz BH, Corey PN: Incidence of adverse drug reactions in hospitalized patients: a meta-analysis of prospective studies. JAMA. 279: 1200-1205, 1998. 6. Vesell ES: Advances in pharmacogenetics. Prog Med Genet. 9: 291-367, 1973. 23. Schmeling H, Biber D, Heins S, Horneff G: Influence of methylenetetrahydrofolate reductase polymorphisms on efficacy and toxicity of methotrexate in patients with juvenile idiopathic arthritis. J Rheumatol. 32(9): 1832-1836, 2005. 5. Vessel ES, Page JG: Genetic control of drug levels in man: antipyrine. Science. 161(836): 72-73, 1968. 17. Shibata K, Ito T, Kitamura Y, Iwasaki N, Tanaka H, Kamatani N: Simultaneous estimation of haplotype frequencies and quantitative trait parameters: applications to the test of association between phenotype and diplotype configuration. Genetics 168: 525-539, 2004. 19. Taniguchi A, Urano W, Tanaka E, Furihata S, Kamitsuji S, Inoue E, Yamanaka M, Yamanaka H, Kamatani N: Validation of the associations between SNPs or haplotypes and responses to disease-modifying antirheumatic drugs in patients with rheumatoid arthritis: aproposal for prospective pharmacogenomic study in clinical practice. Pharmacogenet Genomics in press 2. Lehmann H, Ryan E: The familial incidence of low pseudocholinesterase level. Lancet. 271(6934): 124, 1956. 12. Moriguchi M, Terai C, Koseki Y, Uesato M, Nakajima A, Inada S, Nishinarita M, Uchida S, Nakajima A, Kim SY, Chen CL, Kamatani N: Influence of genotypes at SAA1 and SAA2 loci on the development and the length of latent period of secondary AA-amyloidosis in patients with rheumatoid arthritis. Hum Genet. 105(4): 360-366, 1999. 20. Urano W, Taniguchi A, Yamanaka H, Tanaka E, Nakajima H, Matsuda Y, Akama H, Kitamura Y, Kamatani N: Polymorphisms in the methylenetetrahydrofolate reductase gene were associated with both the efficacy and the toxicity of methotrexate used for the treatment of rheumatoid arthritis, as evidenced by single locus and haplotype analyses. Pharmacogenetics. 12: 183-190, 2002. 9. Takitoh S, Fujii S, Mase Y, Takasaki J, Yamazaki S, Ohnishi Y, Yanagisawa M, Nakamura Y: Accurate automated clustering of two-dimensional data for single-nucleotide polymorphism genotyping by a combination of clustering methods: evaluation by large-scale real data. Bioinformatics in press 16. Ito T, Inoue E, Kamatani N: Association test algorithm between a qualitative phenotype and a haplotype or haplotype set using simultaneous estimation of haplotype frequencies, diplotype configurations and diplotype-based penetrances. Genetics 168: 2339-2348, 2004. 13. Moriguchi M, Terai C, Kaneko H, Koseki Y, Kajiyama H, Uesato M, Inada S, Kamatani N: A novel single-nucleotide polymorphism at the 5'-flanking region of SAA1 associated with risk of type AA amyloidosis secondary to rheumatoid arthritis. Arthritis Rheum. 44(6): 1266-1272, 2001. 14. Kitamura Y, Moriguchi M, Kaneko H, Morisaki H, Morisaki T, Toyama K, Kamatani N: Determination of probability distribution of diplotype configuration (diplotype distribution) for each subject from genotypic data using the EM algorithm. Ann Hum Genet. 66: 183-193, 2002. |
| References_xml | – reference: 8. Lazarou J, Pomeranz BH, Corey PN: Incidence of adverse drug reactions in hospitalized patients: a meta-analysis of prospective studies. JAMA. 279: 1200-1205, 1998. – reference: 12. Moriguchi M, Terai C, Koseki Y, Uesato M, Nakajima A, Inada S, Nishinarita M, Uchida S, Nakajima A, Kim SY, Chen CL, Kamatani N: Influence of genotypes at SAA1 and SAA2 loci on the development and the length of latent period of secondary AA-amyloidosis in patients with rheumatoid arthritis. Hum Genet. 105(4): 360-366, 1999. – reference: 18. Kamatani N, Sekine A, Kitamoto T, Iida A, Saito S, Kogame A, Inoue E, Kawamoto M, Harigai M, Nakamura Y: Large-scale single-nucleotide polymorphism(SNP) and haplotype analyses, using dense SNP Maps, of 199 drug-related genes in 752 subjects: the analysisof the association between uncommon SNPs within haplotype blocks and the haplotypes constructed with haplotype-tagging SNPs. Am J Hum Genet. 75: 190-203, 2004. – reference: 15. Ito T, Chiku S, Inoue E, Tomita M, Morisaki T, Morisaki H, Kamatani N: Estimation of haplotype frequencies, linkage disequilibrium measures and combination of haplotype copies in each pool using pooled DNA data. Am J Hum Genet. 72: 384-398, 2003. – reference: 21. Tanaka E, Taniguchi A, Urano W, Nakajima H, Matsuda Y, Kitamura Y, Saito M, Yamanaka H, Saito T, Kamatani N: Adverse effects of sulphasalazine in rheumatoid arthritis patients are associated with diplotype configuration at N-actyltransferase 2 gene. J Rheumatol. 29: 2492-2499, 2002. – reference: 17. Shibata K, Ito T, Kitamura Y, Iwasaki N, Tanaka H, Kamatani N: Simultaneous estimation of haplotype frequencies and quantitative trait parameters: applications to the test of association between phenotype and diplotype configuration. Genetics 168: 525-539, 2004. – reference: 20. Urano W, Taniguchi A, Yamanaka H, Tanaka E, Nakajima H, Matsuda Y, Akama H, Kitamura Y, Kamatani N: Polymorphisms in the methylenetetrahydrofolate reductase gene were associated with both the efficacy and the toxicity of methotrexate used for the treatment of rheumatoid arthritis, as evidenced by single locus and haplotype analyses. Pharmacogenetics. 12: 183-190, 2002. – reference: 24. Yamada T, Okuda Y, Takasugi K, Wang L, Marks D, Benson MD, Kluve-Beckerman B: An allele of serum amyloid A1 associated with amyloidosis in both Japanese and Caucasians. Amyloid. 10(1): 7-11, 2003. – reference: 19. Taniguchi A, Urano W, Tanaka E, Furihata S, Kamitsuji S, Inoue E, Yamanaka M, Yamanaka H, Kamatani N: Validation of the associations between SNPs or haplotypes and responses to disease-modifying antirheumatic drugs in patients with rheumatoid arthritis: aproposal for prospective pharmacogenomic study in clinical practice. Pharmacogenet Genomics in press – reference: 2. Lehmann H, Ryan E: The familial incidence of low pseudocholinesterase level. Lancet. 271(6934): 124, 1956. – reference: 1. Beutler E, Mathai CK, Smith JE: Biochemical variants of glucose-6-phosphate dehydrogenase giving rise to congenital nonspherocytic hemolytic disease. Blood. 31(2): 131-150, 1968. – reference: 11. Benjamini and Y Hochberg: Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. J. Roy Stat Soc, Ser B. 57: 289-300, 1995. – reference: 9. Takitoh S, Fujii S, Mase Y, Takasaki J, Yamazaki S, Ohnishi Y, Yanagisawa M, Nakamura Y: Accurate automated clustering of two-dimensional data for single-nucleotide polymorphism genotyping by a combination of clustering methods: evaluation by large-scale real data. Bioinformatics in press – reference: 7. International HapMap Consortium: Integrating ethics and science in the International HapMap Project. Nat Rev Genet. 5: 467, 2004. – reference: 4. Vessel ES, Page JG: Genetic control of drug levels in man: phenylbutazone. Science. 159(822): 1479-1480, 1968. – reference: 22. Van Ede AE, Laan RF, Blom HJ, Huizinga TW, Haagsma CJ, Giesendorf BA, de Boo TM, van de Putte LB: The C677T mutation in the methylenetetrahydrofolate reductase gene: a genetic risk factor for methotrexate-related elevation of liver enzymes in rheumatoid arthritis patients. Arthritis Rheum. 44(11): 2525-2530, 2001. – reference: 14. Kitamura Y, Moriguchi M, Kaneko H, Morisaki H, Morisaki T, Toyama K, Kamatani N: Determination of probability distribution of diplotype configuration (diplotype distribution) for each subject from genotypic data using the EM algorithm. Ann Hum Genet. 66: 183-193, 2002. – reference: 10. Iwamoto T, Ikari K, Nakamura T, Kuwahara M, Toyama Y, Tomatsu T, Momohara S, Kamatani N: Association between PADI4 and rheumatoid arthritis: a meta-analysis. Rheumatology. 45: 804-807, 2006. – reference: 13. Moriguchi M, Terai C, Kaneko H, Koseki Y, Kajiyama H, Uesato M, Inada S, Kamatani N: A novel single-nucleotide polymorphism at the 5'-flanking region of SAA1 associated with risk of type AA amyloidosis secondary to rheumatoid arthritis. Arthritis Rheum. 44(6): 1266-1272, 2001. – reference: 5. Vessel ES, Page JG: Genetic control of drug levels in man: antipyrine. Science. 161(836): 72-73, 1968. – reference: 3. Evans DAP, Manley K, McKusick VA: Genetic control of isoniazid metabolism in man. Br Med J. 5197: 485-491, 1960. – reference: 16. Ito T, Inoue E, Kamatani N: Association test algorithm between a qualitative phenotype and a haplotype or haplotype set using simultaneous estimation of haplotype frequencies, diplotype configurations and diplotype-based penetrances. Genetics 168: 2339-2348, 2004. – reference: 23. Schmeling H, Biber D, Heins S, Horneff G: Influence of methylenetetrahydrofolate reductase polymorphisms on efficacy and toxicity of methotrexate in patients with juvenile idiopathic arthritis. J Rheumatol. 32(9): 1832-1836, 2005. – reference: 6. Vesell ES: Advances in pharmacogenetics. Prog Med Genet. 9: 291-367, 1973. |
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| Title | 個別化医療とバイオインフォマティックス |
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