原子炉間欠泉に駆動された冥王代原初代謝経路
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Published in | 地学雑誌 Vol. 129; no. 6; pp. 779 - 804 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | Japanese |
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公益社団法人 東京地学協会
25.12.2020
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ISSN | 0022-135X 1884-0884 |
DOI | 10.5026/jgeography.129.779 |
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Author | 丸山, 茂徳 戎崎, 俊一 大島, 拓 鎌形, 洋一 原, 正彦 玉木, 秀幸 中井, 亮佑 西原, 秀典 黒川, 顕 鈴木, 鉄兵 森, 宙史 |
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References | Kantor, R.S., Wrighton, K.C., Handley, K.M., Sharon, I., Hug, L.A., Castlle, C.J., Thomas, B.C. and Banfield, J.F. (2013): Small genomes and sparse metabolisms of sediment-associated bacteria from four candidate phyla. mBio, 4, e00708-e00713. Pasek, M.A., Dworkin, J.P. and Lauretta, D.S. (2007): A radical pathway for organic phosphorylation during schreibersites corrosion with implication for the origin of life. Geochimica et Cosmochimica Acta, 71, 1721-1736. Hover, B.M., Loksztejn, A., Ribeiro, A.A. and Yokoyama, K. (2013): Identification of a cyclic nucleotide as a cryptic intermediate in molybdenum cofactor biosynthesis. Journal of the American Chemical Society, 135, 7019-7032. Reinhold-Hurek, B. and Shubb, D.A. (1992): Self-splicing introns in tRNA genes of widely divergent bacteria. Nature, 357, 173-176. Adams, J.A. (2001): Kinetic and catalytic mechanisms of protein kinases. Chemical Reviews, 101, 2271-2290. Pasek, M.A. and Lauretta, D.S. (2008): Extraterrestrial flux of potentially prebiotic C, N, and P to the early Earth. Origins of Life and Evolution of Biospheres, 38, 5-21. Ward, W.L., Plakos, K. and DeRose, V.J. (2014): Nucleic acid catalysis: Metals, nucleobases, and other cofactors. Chemical Reviews, 114, 4318-4342. Warren, P.H. (1985): The Magma ocean concept and lunar evolution. Annual Review of Earth and Planetary Sciences, 13, 201-240. Powner, M.W., Gerland, B. and Sutherland, D. (2009): Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions. Nature, 459, 239-242. Ronimus, R.S. and Morgan, H.W. (2003): Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism. Archaea, 1, 199-221. Degani, Ch. and Halmann, M. (1968): Alkaline reactions of glucose 6-phosphate. Journal of American Chemical Society, 90, 1313-1317. Hidese, R., Mihara, H. and Esaki, N. (2011): Bacterial cysteine desulfurases: Versatile key players in biosynthetic pathways of sulfur-containing biofactors. Applied Microbiology and Biotechnology, 91, 47-61. Stopler, D.A. and Keller, B. (2018): A record f deep-ocean dissolved O2 from the oxidation state of iron in submarine basalts. Nature, 553, 323-327. Keller, M.A., Turchyn, A.V. and Ralser, M. (2014): Non-enzymatic glycolysis and pentose phosphate pathway-like reactions in a plausible Archean ocean. Molecular Systems Biology, 10, 725. Doudna, J.A. and Szostak, J.W. (1989): RNA-catalysed synthesis of complimentary-strand RNA. Nature, 339, 519-522. Davis, B.H. (2001): Fischer-Tropsch synthesis: Current mechanism and futuristic needs. Fuel Processing Technology, 71, 157-166. Degani, C.H. and Halmann, M. (1967): Chemical evolution of carbohydrate metabolism. Nature, 216, 1207. Higashi, K., Kawai, Y., Baba, T., Kurokawa, K. and Oshima, T. (2016): Essential cellular modules for the proliferation of the primitive cell. Geoscience Frontiers, doi:10.1016/j.gsf.2016.11.013. Lozovaya, G.I., Masinovsky, Z. and Sivash, A.A. (1990): Protoporphyrin ix as a possible ancient photosensitizer: Spectral and photochemical studies. Origin of Life and Biospheres, 20, 321-330. Krot, A.N., Zaslavskay, N.I., Petaev, M.I., Kononkova, N.N., Kolesov, G.M. and Barsukova, L.D. (1992): The Sychevka- IIIAB iron meteorite: A new find from Russia. Meteoritics, 27, 465-466. Sancar, A. (2003): Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors. Chemical Reviews, 103, 2203-2237. Bodu, R., Bouzigue, H., Morin, N. and Pfiffelm, J.P. (1972): Sur L'existence d'anomalies isotropiques recontrees dans L'uranium du Gabon. Comptes Rendus de l'Académie des Sciences Paris, 275, 1731-1734. Dann, L.G. and Britton, H.G. (1978): Kinetics and mechanism of action of muscle pyruvate kinase. Biochemical Journal, 169, 39-54. Etiope, G. and Lollar, B.S. (2013): Abiotic methane on Earth. Review of Geophysics, 51, 276-299. Kuroda, P.F. (1956): On the nuclear physical stability of the uranium minerals. Journal of Chemical Physics, 25, 781-782. Banerjee, R. and Ragsdale, W.S. (2003): The many faces of vitamin B12: Catalysis by cobalamin-dependent enzymes. Annual Review of Biochemistry, 72, 209-247. Etiope, G., Tsikouras, B., Kordella, S., Ifandi, E., Christodoulou, D. and Papatheodorou, G. (2013): Methane flux and origin in the Othrys ophiolite hyperalkaline springs, Greese. Chemical Geology, 347, 161-174. Newsom, H.E. and Sims, K.W. (1991): Core formation during early accretion of the Earth. Science, 252, 926-933. Ragsdale, S.W. (2009): Nickel-based enzyme systems. Journal of Biological Chemistry, 284, 18571-18575. Mulkidjanian, A.Y., Bychkov, A.Y., Dibrova, D.V., Galperin, M.Y. and Koonine, E.V. (2012): Origin of first cells at terrestrial, anoxic geothermal fields. Proceeding of the National Academy of Sciences of the United States of America, 109, E821-830. Wrington, K.C., Castelle, C.J., Wilkins, M.J., Hug, L.A., Sharon, I., Thomas, B.C., Handley, K.M., Mullin, S.W., Nicora, C.D., Singh, A., Lipton, M.S., Long, P.E., Williams, K.H. and Banfield, J.F. (2014): Metabolic interdependensies between phylogenetically novel fermantaters and respiratory organisms in unconfined aquifer. ISME Journal, 8, 1452-1463. Nakamura, T., Zhao, Y., Yamagata, Y., Hua, Y. and Yang, W. (2012): Watching DNA polymerase eta makes a phosphodiester bond. Nature, 487, 196-202. Su, C., Abarca, R.R., de Luna, M.D.G. and Lu, M. (2014): Phosphate recovery from fluidized-bed wastewater by struvite crystallization technology. Journal of the Taiwan Institute of Chemical Engineers, 45, 2395-2402. Xu, P., Ge, X., Wang, X., Dou, Y., Xu, J.Z., Patel, R., Stone, V., Trih, M., Kitten, T., Bonchev, D. and Buck, G.A. (2011): Genome-wide essential gene identification in Streptococcus sanguinis. Scientific Reports, 1, 125, doi:10.1038/srep00125. Guerrier-Takada, C., Gardiner, K., Marsh, T., Pace, N. and Altman, S. (1983): The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell, 35, 849-857. Kritsky, M.S. and Telegina, T.A. (2004): Origins: Genesis, Evolution, and Diversity of Life edited by Seckbach, J., Springer, 215-230. Davison, W. (1991): The solubility of iron sulphides in synthetic and natural waters at ambient temperatures. Aquatic Science, 53/4, 309-329. Etiope, G. (2011): Abiotic methane flux from the Chimaera seep and Tekirova ophiolites (Turkey): Understanding gas exhalation from low temperature serpentinization and implications for Mars. Earth and Planetary Science Letters, 310, 96-104. Ritson, D.J. and Sutherland, J.D. (2014): Conversion of biosynthetic precursors of RNA to those of DNA by photoredox chemistry. Journal of Molecular Evolution, 78, 245-250. Adam, Z. (2007): Actinides and life's origins. Astrobiology, 7, 852-872. Scott, W.D., Wrigley, T.J. and Webb, K.M. (1991): A computer model of struvite solution chemistry. Talanta, 38, 889-895. Rubin, A.E. (1997): Mineralogy of meteorite. Meteorics and Planetary Science, 32, 231-247. Ebisuzaki, T. and Maruyama, M. (2017): Nuclear geyser model of the origin of life: Driving force to promote the synthesis of building blocks of life. Geoscience Frontiers, 8, 275-298. Nikandrov, V.V., Brin, G.P. and Krasnovskii, A.A. (1978): Light-induced activation of NADH and NADPH. Biochemistry-Moscow, 43, 636-645. Powner, M.W. and Sutherland, J.D. (2010): Phosphate-mediated interconversion of Riboand Arabino-configured prebiotic nucleotide intermediates. Angewandte Chemie International Edition, 49, 4641-4643. Yuvaniyama, P., Agar, J.N., Cash, V.L., Johnson, M.K. and Dean, D.R. (2000): NifS-directed assembly of a transient [2Fe–2S] cluster within the NifU protein. Proceedings National Academy of Science of the United States of America, 97, 599-604. Chyba, C. and Sagan, C. (1992): Endogenous production, exogeneous delivery and impact-shock synthesis of organic molecules: An inventory for the origin of life. Nature, 355, 125-132. Reed, S.J.B. (1965): Electron-probe microanalysis of schreibersite and rhabdite in iron meteorites. Geochimica et Cosmochimica Acta, 29, 513. Patel, B.H., Percivalle, C., Ritson, D.J., Duffy, C.D. and Sutherland, J.D. (2015): Common origins of RNA, protein and lipid precursors in a cyanosulfidic protometabolism. Nature Chemistry, 7, 301-307. Rajakovich, L.J., Tomlinson, J. and Dos Santos, P.C. (2012): Functional analysis of bacillus subtilis genes involved in the biosynthesis of 4-thiouridine in tRNA. Journal of Bacteriology, 194, 4933-4940. Pasek, M.A. and Lauretta, D.S. (2005): Aqueous corrosion of phosphate minerals from iron meteorites, A highly reactive source of prebiotic phosphorous on the surface of the early Earth. Astrobiology, 5, 515-535. Miller, S.L. (1955): Production of some organic compounds under possible primitive Earth conditions. Journal of the American Chemical Society, 77, 2351-2361. Gauthier-Lafaye, F. and Weber, F. (1981): Les concentration uraniferes du Francevillien du Garbon: Leur association avec des gites a hydrocarbures fossils du Proterzoique inferieur. Comptes Rendus des Seances de l'Academie des Sciences. Serie 2, 292, 69-74. Oro, J. (1960): Synthesis of adenine from ammonium cyanide. Biochemical and Biophysical Research Communications, 2, 407-412. Ritson, D.J. and Sutherland, J.D. (2013): Synthesis of aldehydic ribonucleotide and amino acid precursors by photoredox chemistry. Angwandte Chemie-International Edition, 52, 5845-5847. Yarus, M. (2002): Primordial genetics: Phenotype of ribocite. Annual Review of Genetics, 36, 125-151. Yarus, M. (2011): Getting past the RNA world: The initial darwinian ancestor. Cold Spring Harbour Perspectives in Biology, 3, a003590. Suzuki, S., Ishii, S., Hoshino, T., Rietze, A., Tenney, A., Morrill, P.L., Inagaki, F., Kuenen, J.G. and Nealson, K.H. (2017): Unusual metabolic diversity of hyperalkaliphilic microbial communities associated with subterranean serpentinization at The Cedars. IMSE Journal, 11, 2584-2598. Hunter, R. and Taylor, L.A. (1981): Rust and Screibersite in Applo 16 highland rocks: Manifestations of |
References_xml | – reference: Kruger, K., Grabowski, P.J., Zaug, A.J., Sands, J., Gottschling, D.E. and Cech, T.R. (1982): Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena. Cell, 31, 147-157. – reference: Lozovaya, G.I., Masinovsky, Z. and Sivash, A.A. (1990): Protoporphyrin ix as a possible ancient photosensitizer: Spectral and photochemical studies. Origin of Life and Biospheres, 20, 321-330. – reference: Higashi, K., Kawai, Y., Baba, T., Kurokawa, K. and Oshima, T. (2016): Essential cellular modules for the proliferation of the primitive cell. Geoscience Frontiers, doi:10.1016/j.gsf.2016.11.013. – reference: Robertson, M. and Joyce, G.F. (2014): Highly efficient self-replicating RNA enzymes. Chemistry and Biology, 21, 238-245. – reference: Cody, G.D. (2005): Geochemical connections to primitive metabolism. Elements, 1, 139-143. – reference: Ragsdale, S.W. (2009): Nickel-based enzyme systems. Journal of Biological Chemistry, 284, 18571-18575. – reference: Kisker, C., Schindelin, H. and Rees, D.C. (1997): Molybdenum-cofactor-containing enzymes: Structure and mechanism. Annual Review of Biochemistry, 66, 233-267. – reference: Takano, H., Beppu, T. and Ueda, K. (2006): The CarA/LitR-family transcriptional regulator: Its possible role as a photosensor and wide distribution in non-phototrophic bacteria. Bioscience, Biotechnology, and Biochemistry, 70, 2320-2324. – reference: Meshik, A.P., Hohenberg, C.M. and Pravdivsteva, Q.V. (2004): Record of cycling operation of the natural nuclear reactor in the Oklo/Okelobondo area in Gabon. Physical Review Letters, 93, 182302-1-4. – reference: Yarus, M. (2011): Getting past the RNA world: The initial darwinian ancestor. Cold Spring Harbour Perspectives in Biology, 3, a003590. – reference: Arai, N., Yasuoka, K. and Zeng, X.C. (2016): Self-assembly of Janus oligomers into onion-like vesicles with layer-by-layer Water discharging capability: Minimalist model. ACS Nano, 10, 8026-8037. – reference: Yarus, M. (2002): Primordial genetics: Phenotype of ribocite. Annual Review of Genetics, 36, 125-151. – reference: Arai, N., Yoshimoto, Y., Yasuoka, K. and Ebisuzaki, T. (2003): Self-assembly behaviors of primitive and modern lipid membrane solutions: A coarse-grained molecular simulation study. Physical Chemistry Chemical Physics, 18, 19426-19432. – reference: Davison, W. (1991): The solubility of iron sulphides in synthetic and natural waters at ambient temperatures. Aquatic Science, 53/4, 309-329. – reference: Miller, S.L. (1955): Production of some organic compounds under possible primitive Earth conditions. Journal of the American Chemical Society, 77, 2351-2361. – reference: Degani, Ch. and Halmann, M. (1968): Alkaline reactions of glucose 6-phosphate. Journal of American Chemical Society, 90, 1313-1317. – reference: Ritson, D.J. and Sutherland, J.D. (2012): Prebiotic synthesis of simple sugars by photoredox systems chemistry. Nature Chemistry, 4, 895-899. – reference: Whitaker, E.A. (1981): The lunar Procellarum basin. Multi-ring Basins: Formation and Evolution; Proceedings of Lunar and Planetary Science Conference, 105-111. – reference: Doudna, J.A. and Szostak, J.W. (1989): RNA-catalysed synthesis of complimentary-strand RNA. Nature, 339, 519-522. – reference: Su, C., Abarca, R.R., de Luna, M.D.G. and Lu, M. (2014): Phosphate recovery from fluidized-bed wastewater by struvite crystallization technology. Journal of the Taiwan Institute of Chemical Engineers, 45, 2395-2402. – reference: Vaidya, N., Manapat, M.L., Chen, I.A., Xulvi-Brunet, R., Hayden, E. and Lehman, N. (2012): Spontaneous network formation among cooperative RNA replicators. Nature, 491, 72-77. – reference: Etiope, G. and Lollar, B.S. (2013): Abiotic methane on Earth. Review of Geophysics, 51, 276-299. – reference: Maruyama, S. and Ebisuzaki, T. (2017): Origin of the Earth: A proposal of new model called ABEL. Geoscience Frontiers, 8, 253-274. – reference: Pasek, M.A. and Lauretta, D.S. (2008): Extraterrestrial flux of potentially prebiotic C, N, and P to the early Earth. Origins of Life and Evolution of Biospheres, 38, 5-21. – reference: Kasting, J.F., (1993): Earth's early atmosphere. Science, 259, 920-926. – reference: Yuvaniyama, P., Agar, J.N., Cash, V.L., Johnson, M.K. and Dean, D.R. (2000): NifS-directed assembly of a transient [2Fe–2S] cluster within the NifU protein. Proceedings National Academy of Science of the United States of America, 97, 599-604. – reference: Nikandrov, V.V., Brin, G.P. and Krasnovskii, A.A. (1978): Light-induced activation of NADH and NADPH. Biochemistry-Moscow, 43, 636-645. – reference: Pasek, M.A. and Lauretta, D.S. (2005): Aqueous corrosion of phosphate minerals from iron meteorites, A highly reactive source of prebiotic phosphorous on the surface of the early Earth. Astrobiology, 5, 515-535. – reference: Patel, B.H., Percivalle, C., Ritson, D.J., Duffy, C.D. and Sutherland, J.D. (2015): Common origins of RNA, protein and lipid precursors in a cyanosulfidic protometabolism. Nature Chemistry, 7, 301-307. – reference: Scott, W.D., Wrigley, T.J. and Webb, K.M. (1991): A computer model of struvite solution chemistry. Talanta, 38, 889-895. – reference: Ebisuzaki, T. and Imaeda, Y. (2017): United theory of planet formation (i): Tandem regime. New Astronomy, 54, 7-23. – reference: Davis, B.H. (2001): Fischer-Tropsch synthesis: Current mechanism and futuristic needs. Fuel Processing Technology, 71, 157-166. – reference: Adams, J.A. (2001): Kinetic and catalytic mechanisms of protein kinases. Chemical Reviews, 101, 2271-2290. – reference: Voet, D., Voet, J.G. and Pratt, C.W. (2008): Fundamentals of Biochemistry: Life at the Molecular Level 3rd Edition. John Wiley & Sons, 501-503. – reference: Guerrier-Takada, C., Gardiner, K., Marsh, T., Pace, N. and Altman, S. (1983): The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell, 35, 849-857. – reference: Wrington, K.C., Castelle, C.J., Wilkins, M.J., Hug, L.A., Sharon, I., Thomas, B.C., Handley, K.M., Mullin, S.W., Nicora, C.D., Singh, A., Lipton, M.S., Long, P.E., Williams, K.H. and Banfield, J.F. (2014): Metabolic interdependensies between phylogenetically novel fermantaters and respiratory organisms in unconfined aquifer. ISME Journal, 8, 1452-1463. – reference: Banerjee, R. and Ragsdale, W.S. (2003): The many faces of vitamin B12: Catalysis by cobalamin-dependent enzymes. Annual Review of Biochemistry, 72, 209-247. – reference: Hunter, R. and Taylor, L.A. (1981): Rust and Screibersite in Applo 16 highland rocks: Manifestations of volatile-element mobility. Proceedings of the Lunar and Planetary Science Conference, 12B, 253-259. – reference: Johnston, W.K., Unrau, P., Lawrence, M., Glasner, M. and Bartel, D.P. (2001): RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension. Science, 292, 1319-1325. – reference: Kasting, J.F. (1990): Bolide impacts and the oxidation-state of carbon in the Earth's early atmosphere. Origin of Life and Evolution of the Biosphere, 20, 199-231. – reference: Kuroda, P.F. (1956): On the nuclear physical stability of the uranium minerals. Journal of Chemical Physics, 25, 781-782. – reference: Hover, B.M., Loksztejn, A., Ribeiro, A.A. and Yokoyama, K. (2013): Identification of a cyclic nucleotide as a cryptic intermediate in molybdenum cofactor biosynthesis. Journal of the American Chemical Society, 135, 7019-7032. – reference: Ritson, D.J. and Sutherland, J.D. (2013): Synthesis of aldehydic ribonucleotide and amino acid precursors by photoredox chemistry. Angwandte Chemie-International Edition, 52, 5845-5847. – reference: Brasen, C., Esser, D., Rauch, B. and Slebers, B. (2014): Carbohydrate metabolism in archaea: Current insights into unusual enzymes and pathways and their regulation. Microbiology and Molecular Biology Reviews, 78, 89-75. – reference: Chyba, C. and Sagan, C. (1992): Endogenous production, exogeneous delivery and impact-shock synthesis of organic molecules: An inventory for the origin of life. Nature, 355, 125-132. – reference: Gilbert, W. (1986): The RNA world. Nature, 319, 618. – reference: Mueller, E.G., Buck, C.J., Palenchar, P.M., Barnhart, L.E. and Paulson, J.L. (1998): Identification of a gene involved in the generation of 4-thiouridine in tRNA. Nucleic Acids Research, 26, 2606-2610. – reference: Etiope, G., Tsikouras, B., Kordella, S., Ifandi, E., Christodoulou, D. and Papatheodorou, G. (2013): Methane flux and origin in the Othrys ophiolite hyperalkaline springs, Greese. Chemical Geology, 347, 161-174. – reference: Neuilly, M., Nief, G., Vendryes, G., Yvon, J., Bussac, J. and Frejacqu, C. (1972): Sur l'exstence dans un passe recule d'une reaction en chaine naturelle de fission, dans le gisement d'uranium d'Oklo (Gabon). Comptes rendus de l'Academie des Sciences, 275, 1847-1849. – reference: Reinhold-Hurek, B. and Shubb, D.A. (1992): Self-splicing introns in tRNA genes of widely divergent bacteria. Nature, 357, 173-176. – reference: Martin, W. and Russell, M.J. (2002): On the origins of cells: A hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells. Philosophical Transactions of the Royal Society of London B, 02tb009e.1. – reference: Sato, T., Yoshiya, K. and Maruyama, S. (2019): History of the Hadean “living microfossil” OD1 and ultra-reducing environments. Journal of Geography (Chigaku Zasshi), 128, 571-596. – reference: Wrington, K.C., Thomas, B.C., Sharon, I., Miller, C.S., Castelle, C.J., VerBerkmoes, N.C., Wilkins, M.J., Hettich, R.L., Lipton, M.S., Williams, K.H., Long, P.E. and Banfield, J.F. (2012): Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla. Science, 337, 1033-1034. – reference: Calvin, M. and Benson, A.A. (1948): The path of carbon in photosynthesis. Science, 107, 476-480. – reference: Etiope, G. (2011): Abiotic methane flux from the Chimaera seep and Tekirova ophiolites (Turkey): Understanding gas exhalation from low temperature serpentinization and implications for Mars. Earth and Planetary Science Letters, 310, 96-104. – reference: Sancar, A. (2003): Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors. Chemical Reviews, 103, 2203-2237. – reference: Gauthier-Lafaye, F. and Weber, F. (1981): Les concentration uraniferes du Francevillien du Garbon: Leur association avec des gites a hydrocarbures fossils du Proterzoique inferieur. Comptes Rendus des Seances de l'Academie des Sciences. Serie 2, 292, 69-74. – reference: Maruyama, S., Santosh, M. and Azuma, A. (2018): Initiation of plate techtonics in the hadean: Eclogitization triggered by ABEL Bombardment. Geoscience Frontiers, 9, 1033-1046 – reference: Krot, A.N., Zaslavskay, N.I., Petaev, M.I., Kononkova, N.N., Kolesov, G.M. and Barsukova, L.D. (1992): The Sychevka- IIIAB iron meteorite: A new find from Russia. Meteoritics, 27, 465-466. – reference: Pasek, M.A., Dworkin, J.P. and Lauretta, D.S. (2007): A radical pathway for organic phosphorylation during schreibersites corrosion with implication for the origin of life. Geochimica et Cosmochimica Acta, 71, 1721-1736. – reference: Sapra, R., Bagramyan, K. and Adams, A.A. (2003): A simple energy-conserving system: Proton reduction coupled to proton translocation. Proceedings National Academy of Science of the United States of America, 100, 7545-7550. – reference: Kantor, R.S., Wrighton, K.C., Handley, K.M., Sharon, I., Hug, L.A., Castlle, C.J., Thomas, B.C. and Banfield, J.F. (2013): Small genomes and sparse metabolisms of sediment-associated bacteria from four candidate phyla. mBio, 4, e00708-e00713. – reference: Powner, M.W., Gerland, B. and Sutherland, D. (2009): Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions. Nature, 459, 239-242. – reference: Xu, P., Ge, X., Wang, X., Dou, Y., Xu, J.Z., Patel, R., Stone, V., Trih, M., Kitten, T., Bonchev, D. and Buck, G.A. (2011): Genome-wide essential gene identification in Streptococcus sanguinis. Scientific Reports, 1, 125, doi:10.1038/srep00125. – reference: Newsom, H.E. and Sims, K.W. (1991): Core formation during early accretion of the Earth. Science, 252, 926-933. – reference: Reed, G.H., Poyner, R.R., Larsen, T.M., Wedekind, J.E. and Rayment, I. (1996): Structural and mechanistic studies of enolase. Current Opinion in Structural Biology, 6, 736-743. – reference: Degani, C.H. and Halmann, M. (1967): Chemical evolution of carbohydrate metabolism. Nature, 216, 1207. – reference: Powner, M.W. and Sutherland, J.D. (2010): Phosphate-mediated interconversion of Riboand Arabino-configured prebiotic nucleotide intermediates. Angewandte Chemie International Edition, 49, 4641-4643. – reference: Rubin, A.E. (1997): Mineralogy of meteorite. Meteorics and Planetary Science, 32, 231-247. – reference: Ndongo, A., Guiraud, M., Vennin, E., Mbina, M., Buoncristiani, J.-F., Thomazo, C. and Flotté, N. (2016): Control of fluid-pressure on early deformation structures in the Paleoproterozoic extensional Franceville Basin (SE Gabon). Precambrian Research, 277, 1-25. – reference: Jolliff, B.L., Gillis, J.J., Haskin, A., Korotev, R.L. and Wieczorek, M.A. (2000): Major Lunar crustal terranes: Surface expressions and crust-mantle origins. Journal of Geophysical Research, 105, 4197-4216. – reference: Warren, P.H. (1985): The Magma ocean concept and lunar evolution. Annual Review of Earth and Planetary Sciences, 13, 201-240. – reference: Ebisuzaki, T. and Maruyama, M. (2017): Nuclear geyser model of the origin of life: Driving force to promote the synthesis of building blocks of life. Geoscience Frontiers, 8, 275-298. – reference: Keller, M.A., Turchyn, A.V. and Ralser, M. (2014): Non-enzymatic glycolysis and pentose phosphate pathway-like reactions in a plausible Archean ocean. Molecular Systems Biology, 10, 725. – reference: Nakamura, T., Zhao, Y., Yamagata, Y., Hua, Y. and Yang, W. (2012): Watching DNA polymerase eta makes a phosphodiester bond. Nature, 487, 196-202. – reference: Pasek, M.A., Dworkin, J.P. and Lauretta, D.S. (2008): Rethinking early Earth phosphorous, geochemistry. Proceedings of the National Academy of Sciences of the United States of America, 105, 853-858. – reference: Ronimus, R.S. and Morgan, H.W. (2003): Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism. Archaea, 1, 199-221. – reference: Stopler, D.A. and Keller, B. (2018): A record f deep-ocean dissolved O2 from the oxidation state of iron in submarine basalts. Nature, 553, 323-327. – reference: Mulkidjanian, A.Y., Bychkov, A.Y., Dibrova, D.V., Galperin, M.Y. and Koonine, E.V. (2012): Origin of first cells at terrestrial, anoxic geothermal fields. Proceeding of the National Academy of Sciences of the United States of America, 109, E821-830. – reference: Suzuki, S., Ishii, S., Hoshino, T., Rietze, A., Tenney, A., Morrill, P.L., Inagaki, F., Kuenen, J.G. and Nealson, K.H. (2017): Unusual metabolic diversity of hyperalkaliphilic microbial communities associated with subterranean serpentinization at The Cedars. IMSE Journal, 11, 2584-2598. – reference: Miller, S.L. (1953): A production of amino acids under possible primitive Earth conditions. Science, 117, 528-529, doi:10.1126/science.117.3046.528. – reference: Rajakovich, L.J., Tomlinson, J. and Dos Santos, P.C. (2012): Functional analysis of bacillus subtilis genes involved in the biosynthesis of 4-thiouridine in tRNA. Journal of Bacteriology, 194, 4933-4940. – reference: Hidese, R., Mihara, H. and Esaki, N. (2011): Bacterial cysteine desulfurases: Versatile key players in biosynthetic pathways of sulfur-containing biofactors. Applied Microbiology and Biotechnology, 91, 47-61. – reference: Dann, L.G. and Britton, H.G. (1978): Kinetics and mechanism of action of muscle pyruvate kinase. Biochemical Journal, 169, 39-54. – reference: Yokoyama, K. and Leimkuhler, S. (2015): The role of FeS clusters for molybdenum cofactor biosynthesis and molybdoenzymes in bacteria. Biochimica et Biophysica Acta, 1853, 1339-1349. – reference: Ritson, D.J. and Sutherland, J.D. (2014): Conversion of biosynthetic precursors of RNA to those of DNA by photoredox chemistry. Journal of Molecular Evolution, 78, 245-250. – reference: Handshuh, G.J. and Orgel, L.E. (1973): Struvite and prebiotic phosphorylation. Science, 483, 484. – reference: Ward, W.L., Plakos, K. and DeRose, V.J. (2014): Nucleic acid catalysis: Metals, nucleobases, and other cofactors. Chemical Reviews, 114, 4318-4342. – reference: Adam, Z. (2007): Actinides and life's origins. Astrobiology, 7, 852-872. – reference: Bodu, R., Bouzigue, H., Morin, N. and Pfiffelm, J.P. (1972): Sur L'existence d'anomalies isotropiques recontrees dans L'uranium du Gabon. Comptes Rendus de l'Académie des Sciences Paris, 275, 1731-1734. – reference: Kritsky, M.S. and Telegina, T.A. (2004): Origins: Genesis, Evolution, and Diversity of Life edited by Seckbach, J., Springer, 215-230. – reference: Oro, J. (1960): Synthesis of adenine from ammonium cyanide. Biochemical and Biophysical Research Communications, 2, 407-412. – reference: Reed, S.J.B. (1965): Electron-probe microanalysis of schreibersite and rhabdite in iron meteorites. Geochimica et Cosmochimica Acta, 29, 513. – reference: Schwartz, G. and Mendel, R.R. (2006): Molybdenum cofactor biosynthesis and molybdenum enzymes. Annual Review of Plant Biology, 57, 623-647. |
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SubjectTerms | RNAワールド 原初代謝系 生命の起源 自然原子炉 酵素 電離放射線 |
Title | 原子炉間欠泉に駆動された冥王代原初代謝経路 |
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