フーリエ変換赤外差スペクトル法: 蛋白質の活性部位構造と分子メカニズム解析
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| Published in | 分光研究 Vol. 57; no. 6; pp. 275 - 287 |
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| Main Author | |
| Format | Journal Article |
| Language | Japanese |
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社団法人 日本分光学会
2008
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| ISSN | 0038-7002 1884-6785 |
| DOI | 10.5111/bunkou.57.275 |
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| Author | 野口, 巧 |
|---|---|
| Author_xml | – sequence: 1 fullname: 野口, 巧 organization: 筑波大学大学院数理物質科学研究科 |
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| References | 51) A. Kita, K. Okajima, Y. Morimoto, M. Ikeuchi, and K. Miki: J. Mol. Biol. 349, 1 (2005). 57) D. Matsuoka, T. Iwata, K. Zikihara, H. Kandori, and S. Tokutomi: Photochem. Photobiol. 83, 122 (2007). 32) H. Kandori: Biochim. Biophys. Acta 1460, 177 (2000). 23) K. Takei, R. Takahashi, and T. Noguchi: J. Phys. Chem. B 112, 6725 (2008). 24) T. Noguchi, T. Ono, and Y. Inoue: Biochemistry 31, 5953 (1992). 18) Y. Kimura, N. Mizusawa, A. Ishii, and T. Ono: Biochemistry 44, 16072 (2005). 6) W. Mantele: Trends Biochem. Sci. 18, 197 (1993). 8) C. Zscherp and A. Barth: Biochemistry 40, 1875 (2001). 35) J. Yano, J. Kern, K. D. Irrgang, M. J. Latimer, U. Bergmann, P. Glatzel, Y. Pushkar, J. Biesiadka, B. Loll, K. Sauer, J. Messinger, A. Zouni, and V. K. Yachandra: Proc. Natl. Acad. Sci. U. S. A. 102, 12047 (2005). 38) W. Hillier and J. Messinger: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005) p.567. 66) P. R. Rich and M. Iwaki: Mol. Biosys. 3, 398 (2007). 12) G. Socrates: Infrared characteristic group frequencies (John Wiley & Sons, Chichester, 1994). 5) T. Noguchi and C. Berthomieu: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005) p.367. 65) S. Nagashima, M. Nakasako, N. Dohmae, M. Tsujimura, K. Tokio, M. Odaka, M. Yohda, N. Kamiya, and I. Endo: Nature Struct. Biol. 5, 347 (1998). 7) R. Vogel and F. Siebert: Curr. Opin. Chem. Biol. 4, 518 (2000). 30) K. N. Ferreira, T. M. Iverson, K. Maghlaoui, J. Barber, and S. Iwata: Science 19, 1831 (2004). 58) T. Iwata, S. Tokutomi, and H. Kandori: J. Am. Chem. Soc. 124, 11840 (2002). 48) H. Suzuki, M. Sugiura, and T. Noguchi: Biochemistry 44, 1708 (2005). 15) Y. Kimura, N. Mizusawa, A. Ishii, T. Yamanari, and T. Ono: Biochemistry 42, 13170 (2003). 3) R. Vogel and F. Siebert: Biopolymers 72, 133 (2003). 49) M. A. Van der Horst and K. J. Hellingwerf: Acc. Chem. Res. 37, 13 (2004). 9) T. Noguchi: Photosynth. Res. 91, 59 (2007). 13) T. Noguchi, J. Honda, T. Nagamune, H. Sasabe, Y. Inoue, and I. Endo: FEBS Lett. 358, 9 (1995). 53) M. Gauden, I. H. M. van Stokkum, J. M. Key, D. C. Luhrs, R. van Grondelle, P. Hegemann, and J. T. M. Kennis: Proc. Natl. Acad. Sci. U.S.A. 103, 10895 (2006). 55) R. Takahashi, K. Okajima, H. Suzuki, H. Nakamura, M. Ikeuchi, and T. Noguchi: Biochemistry 46, 6459 (2007). 42) J. J. S. Van Rensen, and V. V. Klimov: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005). p.329. 19) T. Noguchi, Y. Inoue, and X.-S. Tang: Biochemistry 36, 14705 (1997). 43) C. Aoyama, H. Suzuki, M. Sugiura, and T. Noguchi: Bioche-mistry 47, 2760 (2008). 2) D. M. Byler and H. Susi: Biopolymers 25, 469 (1986). 11) T. Okubo and T. Noguchi: Spectrochim. Acta A 66, 863 (2007). 1) 吉川信也: 生物物理45, 63 (2005). 50) K. Okajima, S. Yoshihara, Y. Fukushima, X. Geng, M. Katayama, S. Higashi, M. Watanabe, S. Sato, S. Tabata, Y. Shibata, S. Itoh, and M. Ikeuchi: J. Biochem. 137, 741 (2005). 29) T. Noguchi: Phil. Trans. R. Soc. B 363, 1189 (2008). 59) H. Suzuki, K. Okajima, M. Ikeuchi, and T. Noguchi: J. Am. Chem. Soc. 130, 12884-12885 (2008). 4) W. Mantele: Anoxygenic Photosynthetic Bacteria, eds. R. E. Blankenship, M. T. Madigan and C. E. Bauer (Kluwer Academic Publishers, Dordrecht, 1995) p.627. 14) T. Noguchi and M. Sugiura: Biochemistry 42, 6035 (2003). 27) H.-A. Chu, W. Hillier, N. A. Law, and G. T. Babcock: Biochim. Biophys. Acta 1503, 69 (2001). 37) R. J. Debus: Biochim. Biophys. Acta 1102, 269 (1992). 41) H. Suzuki, Y. Taguchi, M. Sugiura, A. Boussac, and T. Noguchi: Biochemistry 45, 13454 (2006). 54) S. Masuda, K. Hasegawa, A. Ishii, and T. Ono: Biochemistry 43, 5304 (2004). 20) R. J. Debus: Coord. Chem. Rev. 252, 244 (2008). 16) T. Noguchi, M. Nojiri, K. Takei, M. Odaka, and N. Kamiya: Biochemistry 42, 11642 (2003). 10) T. Noguchi and M. Sugiura: Biochemistry 41, 2322 (2002). 39) T. Noguchi, T. Ono, and Y. Inoue: Biochim. Biophys. Acta 1232, 59 (1995). 36) M. Grabolle, M. Haumann, C. Muller, P. Liebisch, and H. Dau: J. Biol. Chem. 281, 4580 (2006). 33) 前田章夫, 神山勉: 蛋白質・核酸・酵素52, 1314 (2007). 34) Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005). 45) G. Zundel: J. Mol. Struct. 177, 43 (1988). 21) K. Hasegawa, T. Ono, and T. Noguchi: J. Phys. Chem. B 104, 4253 (2000). 47) H. Suzuki, M. Sugiura, and T. Noguchi: Biochemistry 47, 11024-11030 (2008). 56) S. Anderson, V. Dragnea, S. Masuda, J. Ybe, K. Moffat, and C. Bauer: Biochemistry 44, 7998 (2005). 31) B. Loll, J. Kern, W. Saenger, A. Zouni, and J. Biesiadka: Nature 438, 1040 (2005). 60) M. Kobayashi and S. Shimizu: Nature Biotechnol. 16, 733 (1998). 22) R. Takahashi and T. Noguchi: J. Phys. Chem. B 111, 13833 (2007). 40) Y. Taguchi and T. Noguchi: Biochim. Biophys. Acta 1767, 535 (2007). 46) T. Noguchi and M. Sugiura: Biochemistry 39, 10943 (2000). 61) M. Kobayashi, T. Nagasawa, and H. Yamada: Trends Biotechnol. 10, 402 (1992). 25) T. Noguchi and M. Sugiura: Biochemistry 40, 1497 (2001). 26) W. Hillier and G. T. Babcock: Biochemistry 40, 1503 (2001). 52) K. Okajima, Y. Fukushima, H. Suzuki, A. Kita, Y. Ochiai, M. Katayama, Y. Shibata, K. Miki, T. Noguchi, S. Itoh, and M. Ikeuchi: J. Mol. Biol. 363, 10 (2006). 62) T. Noguchi, M. Hoshino, M. Tsujimura, M. Odaka, Y. Inoue, and I. Endo: Biochemistry 35, 16777 (1996). 64) H. Suzuki, M. Nojiri, N. Kamiya, and T. Noguchi: J. Biochem. 136, 115 (2004). 28) T. Noguchi: Coord. Chem. Rev. 252, 336 (2008). 44) T. Noguchi and M. Sugiura: Biochemistry 41, 15706 (2002). 17) T. Noguchi, Y. Inoue, and X.-S. Tang: Biochemistry 38, 10187 (1999). 63) M. Odaka, K. Fujii, M. Hoshino, T. Noguchi, M. Tsujimura, S. Nagashima, M. Yohda, T. Nagamune, Y. Inoue, and I. Endo: J. Am. Chem. Soc. 119, 3785 (1997). |
| References_xml | – reference: 64) H. Suzuki, M. Nojiri, N. Kamiya, and T. Noguchi: J. Biochem. 136, 115 (2004). – reference: 39) T. Noguchi, T. Ono, and Y. Inoue: Biochim. Biophys. Acta 1232, 59 (1995). – reference: 23) K. Takei, R. Takahashi, and T. Noguchi: J. Phys. Chem. B 112, 6725 (2008). – reference: 19) T. Noguchi, Y. Inoue, and X.-S. Tang: Biochemistry 36, 14705 (1997). – reference: 63) M. Odaka, K. Fujii, M. Hoshino, T. Noguchi, M. Tsujimura, S. Nagashima, M. Yohda, T. Nagamune, Y. Inoue, and I. Endo: J. Am. Chem. Soc. 119, 3785 (1997). – reference: 17) T. Noguchi, Y. Inoue, and X.-S. Tang: Biochemistry 38, 10187 (1999). – reference: 6) W. Mantele: Trends Biochem. Sci. 18, 197 (1993). – reference: 10) T. Noguchi and M. Sugiura: Biochemistry 41, 2322 (2002). – reference: 29) T. Noguchi: Phil. Trans. R. Soc. B 363, 1189 (2008). – reference: 53) M. Gauden, I. H. M. van Stokkum, J. M. Key, D. C. Luhrs, R. van Grondelle, P. Hegemann, and J. T. M. Kennis: Proc. Natl. Acad. Sci. U.S.A. 103, 10895 (2006). – reference: 59) H. Suzuki, K. Okajima, M. Ikeuchi, and T. Noguchi: J. Am. Chem. Soc. 130, 12884-12885 (2008). – reference: 18) Y. Kimura, N. Mizusawa, A. Ishii, and T. Ono: Biochemistry 44, 16072 (2005). – reference: 32) H. Kandori: Biochim. Biophys. Acta 1460, 177 (2000). – reference: 16) T. Noguchi, M. Nojiri, K. Takei, M. Odaka, and N. Kamiya: Biochemistry 42, 11642 (2003). – reference: 7) R. Vogel and F. Siebert: Curr. Opin. Chem. Biol. 4, 518 (2000). – reference: 1) 吉川信也: 生物物理45, 63 (2005). – reference: 5) T. Noguchi and C. Berthomieu: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005) p.367. – reference: 24) T. Noguchi, T. Ono, and Y. Inoue: Biochemistry 31, 5953 (1992). – reference: 46) T. Noguchi and M. Sugiura: Biochemistry 39, 10943 (2000). – reference: 54) S. Masuda, K. Hasegawa, A. Ishii, and T. Ono: Biochemistry 43, 5304 (2004). – reference: 26) W. Hillier and G. T. Babcock: Biochemistry 40, 1503 (2001). – reference: 35) J. Yano, J. Kern, K. D. Irrgang, M. J. Latimer, U. Bergmann, P. Glatzel, Y. Pushkar, J. Biesiadka, B. Loll, K. Sauer, J. Messinger, A. Zouni, and V. K. Yachandra: Proc. Natl. Acad. Sci. U. S. A. 102, 12047 (2005). – reference: 36) M. Grabolle, M. Haumann, C. Muller, P. Liebisch, and H. Dau: J. Biol. Chem. 281, 4580 (2006). – reference: 4) W. Mantele: Anoxygenic Photosynthetic Bacteria, eds. R. E. Blankenship, M. T. Madigan and C. E. Bauer (Kluwer Academic Publishers, Dordrecht, 1995) p.627. – reference: 3) R. Vogel and F. Siebert: Biopolymers 72, 133 (2003). – reference: 11) T. Okubo and T. Noguchi: Spectrochim. Acta A 66, 863 (2007). – reference: 51) A. Kita, K. Okajima, Y. Morimoto, M. Ikeuchi, and K. Miki: J. Mol. Biol. 349, 1 (2005). – reference: 61) M. Kobayashi, T. Nagasawa, and H. Yamada: Trends Biotechnol. 10, 402 (1992). – reference: 31) B. Loll, J. Kern, W. Saenger, A. Zouni, and J. Biesiadka: Nature 438, 1040 (2005). – reference: 47) H. Suzuki, M. Sugiura, and T. Noguchi: Biochemistry 47, 11024-11030 (2008). – reference: 22) R. Takahashi and T. Noguchi: J. Phys. Chem. B 111, 13833 (2007). – reference: 38) W. Hillier and J. Messinger: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005) p.567. – reference: 60) M. Kobayashi and S. Shimizu: Nature Biotechnol. 16, 733 (1998). – reference: 14) T. Noguchi and M. Sugiura: Biochemistry 42, 6035 (2003). – reference: 13) T. Noguchi, J. Honda, T. Nagamune, H. Sasabe, Y. Inoue, and I. Endo: FEBS Lett. 358, 9 (1995). – reference: 44) T. Noguchi and M. Sugiura: Biochemistry 41, 15706 (2002). – reference: 62) T. Noguchi, M. Hoshino, M. Tsujimura, M. Odaka, Y. Inoue, and I. Endo: Biochemistry 35, 16777 (1996). – reference: 50) K. Okajima, S. Yoshihara, Y. Fukushima, X. Geng, M. Katayama, S. Higashi, M. Watanabe, S. Sato, S. Tabata, Y. Shibata, S. Itoh, and M. Ikeuchi: J. Biochem. 137, 741 (2005). – reference: 28) T. Noguchi: Coord. Chem. Rev. 252, 336 (2008). – reference: 55) R. Takahashi, K. Okajima, H. Suzuki, H. Nakamura, M. Ikeuchi, and T. Noguchi: Biochemistry 46, 6459 (2007). – reference: 12) G. Socrates: Infrared characteristic group frequencies (John Wiley & Sons, Chichester, 1994). – reference: 41) H. Suzuki, Y. Taguchi, M. Sugiura, A. Boussac, and T. Noguchi: Biochemistry 45, 13454 (2006). – reference: 15) Y. Kimura, N. Mizusawa, A. Ishii, T. Yamanari, and T. Ono: Biochemistry 42, 13170 (2003). – reference: 30) K. N. Ferreira, T. M. Iverson, K. Maghlaoui, J. Barber, and S. Iwata: Science 19, 1831 (2004). – reference: 49) M. A. Van der Horst and K. J. Hellingwerf: Acc. Chem. Res. 37, 13 (2004). – reference: 42) J. J. S. Van Rensen, and V. V. Klimov: Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005). p.329. – reference: 27) H.-A. Chu, W. Hillier, N. A. Law, and G. T. Babcock: Biochim. Biophys. Acta 1503, 69 (2001). – reference: 57) D. Matsuoka, T. Iwata, K. Zikihara, H. Kandori, and S. Tokutomi: Photochem. Photobiol. 83, 122 (2007). – reference: 48) H. Suzuki, M. Sugiura, and T. Noguchi: Biochemistry 44, 1708 (2005). – reference: 52) K. Okajima, Y. Fukushima, H. Suzuki, A. Kita, Y. Ochiai, M. Katayama, Y. Shibata, K. Miki, T. Noguchi, S. Itoh, and M. Ikeuchi: J. Mol. Biol. 363, 10 (2006). – reference: 20) R. J. Debus: Coord. Chem. Rev. 252, 244 (2008). – reference: 25) T. Noguchi and M. Sugiura: Biochemistry 40, 1497 (2001). – reference: 2) D. M. Byler and H. Susi: Biopolymers 25, 469 (1986). – reference: 21) K. Hasegawa, T. Ono, and T. Noguchi: J. Phys. Chem. B 104, 4253 (2000). – reference: 56) S. Anderson, V. Dragnea, S. Masuda, J. Ybe, K. Moffat, and C. Bauer: Biochemistry 44, 7998 (2005). – reference: 43) C. Aoyama, H. Suzuki, M. Sugiura, and T. Noguchi: Bioche-mistry 47, 2760 (2008). – reference: 66) P. R. Rich and M. Iwaki: Mol. Biosys. 3, 398 (2007). – reference: 40) Y. Taguchi and T. Noguchi: Biochim. Biophys. Acta 1767, 535 (2007). – reference: 65) S. Nagashima, M. Nakasako, N. Dohmae, M. Tsujimura, K. Tokio, M. Odaka, M. Yohda, N. Kamiya, and I. Endo: Nature Struct. Biol. 5, 347 (1998). – reference: 45) G. Zundel: J. Mol. Struct. 177, 43 (1988). – reference: 37) R. J. Debus: Biochim. Biophys. Acta 1102, 269 (1992). – reference: 58) T. Iwata, S. Tokutomi, and H. Kandori: J. Am. Chem. Soc. 124, 11840 (2002). – reference: 34) Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds. T. Wydrzynski and K. Satoh (Springer, Dordrecht, The Netherlands, 2005). – reference: 9) T. Noguchi: Photosynth. Res. 91, 59 (2007). – reference: 33) 前田章夫, 神山勉: 蛋白質・核酸・酵素52, 1314 (2007). – reference: 8) C. Zscherp and A. Barth: Biochemistry 40, 1875 (2001). |
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| Title | フーリエ変換赤外差スペクトル法: 蛋白質の活性部位構造と分子メカニズム解析 |
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