Estimation of protein-production levels for ORFs found by E. coli and yeast genome projects, basing on levels of “optimal codon” usage, in connection with feasibility of their protein coding ability and with assignment to foreign-type genes

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Published inGenome Informatics Vol. 5; pp. 188 - 189
Main Authors Ikemura, T., Nakamura, Y., Sugaya, K., Fukagawa, T.
Format Journal Article
LanguageEnglish
Published Japanese Society for Bioinformatics 1994
日本バイオインフォマティクス学会
Online AccessGet full text
ISSN0919-9454
2185-842X
DOI10.11234/gi1990.5.188

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Author Sugaya, K.
Nakamura, Y.
Fukagawa, T.
Ikemura, T.
Author_FL 池村 淑道
中村 保一
菅谷 公彦
深川 竜朗
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  organization: Nat. Inst. Genet. and Grad. Univ. Advanced Studies
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  fullname: Fukagawa, T.
  organization: Nat. Inst. Genet. and Grad. Univ. Advanced Studies
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References [4] Ikemura, T., “Correlation between codon usage and tRNA content in microorganisms.” In Transfer RNA in Protein Synthesis (CRC Press), 87, 1992.
[2] Ikemura, T., “Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes.” J. Mol. Biol., Vol.146, 1, 1981.
[1] Ikemura, T., “Codon usage and tRNA content in unicellular and multicellular organisms” Mol. Biol. Evol., Vol.2, 13, 1985.
[3] Ikemura, T., “Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes.” J. Mol. Biol., Vol.158, 573, 1982.
References_xml – reference: [3] Ikemura, T., “Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes.” J. Mol. Biol., Vol.158, 573, 1982.
– reference: [4] Ikemura, T., “Correlation between codon usage and tRNA content in microorganisms.” In Transfer RNA in Protein Synthesis (CRC Press), 87, 1992.
– reference: [1] Ikemura, T., “Codon usage and tRNA content in unicellular and multicellular organisms” Mol. Biol. Evol., Vol.2, 13, 1985.
– reference: [2] Ikemura, T., “Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes.” J. Mol. Biol., Vol.146, 1, 1981.
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Title Estimation of protein-production levels for ORFs found by E. coli and yeast genome projects, basing on levels of “optimal codon” usage, in connection with feasibility of their protein coding ability and with assignment to foreign-type genes
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