Psoriasis vulgaris in Chinese individuals is associated with PSORS1C3 and CDSN genes
Summary Background Besides the HLA‐Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The −79C, −26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T–1...
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Published in | British journal of dermatology (1951) Vol. 155; no. 4; pp. 663 - 669 |
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Main Authors | , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Oxford, UK
Blackwell Publishing Ltd
01.10.2006
Blackwell |
Subjects | |
Online Access | Get full text |
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Abstract | Summary
Background Besides the HLA‐Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The −79C, −26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T–1236T–1243C) and CDSN*5 (619T–1240G–1243C) are strongly associated with psoriasis in the caucasian population. Until now, no haplotype study of the PSORS1C3 and CDSN genes has been documented in Chinese patients with psoriasis vulgaris.
Objectives We aimed to determine whether genetic polymorphisms of the PSORS1C3 and CDSN genes were associated with an increased risk of psoriasis vulgaris in Chinese patients in Taiwan.
Methods We investigated the PSORS1C3 and CDSN genes for disease association by direct sequencing in 178 patients with psoriasis vulgaris and 203 control subjects. Genotyping for HLA‐Cw*0602, α‐helix coiled‐coil rod homologue (HCR) gene and single nucleotide polymorphism (SNP) n.9 was also carried out using a sequence‐based typing method.
Results The PSORS1C3*582A allele, an SNP in the 3′‐untranslated region of the PSORS1C3 gene, was a major psoriasis vulgaris susceptibility allele in the Chinese population, and the association was much stronger in patients with early‐onset psoriasis vulgaris (22·3% vs. 6·9%, odds ratio = 3·87, Pc =0·0000072). The frequencies of CDSN*TTC and CDSN*971T were also significantly increased in patients with early‐onset psoriasis vulgaris. Moreover, PSORS1C3*582A, SNP n.9*C, Cw*0602 and HCR*WWCC were in near complete linkage disequilibrium (LD) with each other; in contrast, the LD with the CDSN gene was not so strong. SNP n.9*C–Cw*0602–PSORS1C3*582A–HCR*WWCC was a major susceptibility haplotype in patients with early‐onset psoriasis vulgaris (P < 10−7) and this risk haplotype also carried CDSN*TTC and CDSN*971T.
Conclusions The PSORS1C3 and CDSN genes are important psoriasis susceptibility genes in Chinese patients with psoriasis vulgaris. |
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AbstractList | Besides the HLA-Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The -79C, -26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T-1236T-1243C) and CDSN*5 (619T-1240G-1243C) are strongly associated with psoriasis in the caucasian population. Until now, no haplotype study of the PSORS1C3 and CDSN genes has been documented in Chinese patients with psoriasis vulgaris.
We aimed to determine whether genetic polymorphisms of the PSORS1C3 and CDSN genes were associated with an increased risk of psoriasis vulgaris in Chinese patients in Taiwan.
We investigated the PSORS1C3 and CDSN genes for disease association by direct sequencing in 178 patients with psoriasis vulgaris and 203 control subjects. Genotyping for HLA-Cw*0602, alpha-helix coiled-coil rod homologue (HCR) gene and single nucleotide polymorphism (SNP) n.9 was also carried out using a sequence-based typing method.
The PSORS1C3*582A allele, an SNP in the 3'-untranslated region of the PSORS1C3 gene, was a major psoriasis vulgaris susceptibility allele in the Chinese population, and the association was much stronger in patients with early-onset psoriasis vulgaris (22.3% vs. 6.9%, odds ratio = 3.87, P(c) =0.0000072). The frequencies of CDSN*TTC and CDSN*971T were also significantly increased in patients with early-onset psoriasis vulgaris. Moreover, PSORS1C3*582A, SNP n.9*C, Cw*0602 and HCR*WWCC were in near complete linkage disequilibrium (LD) with each other; in contrast, the LD with the CDSN gene was not so strong. SNP n.9*C-Cw*0602-PSORS1C3*582A-HCR*WWCC was a major susceptibility haplotype in patients with early-onset psoriasis vulgaris (P < 10(-7)) and this risk haplotype also carried CDSN*TTC and CDSN*971T.
The PSORS1C3 and CDSN genes are important psoriasis susceptibility genes in Chinese patients with psoriasis vulgaris. Besides the HLA-Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The -79C, -26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T-1236T-1243C) and CDSN*5 (619T-1240G-1243C) are strongly associated with psoriasis in the caucasian population. Until now, no haplotype study of the PSORS1C3 and CDSN genes has been documented in Chinese patients with psoriasis vulgaris.BACKGROUNDBesides the HLA-Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The -79C, -26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T-1236T-1243C) and CDSN*5 (619T-1240G-1243C) are strongly associated with psoriasis in the caucasian population. Until now, no haplotype study of the PSORS1C3 and CDSN genes has been documented in Chinese patients with psoriasis vulgaris.We aimed to determine whether genetic polymorphisms of the PSORS1C3 and CDSN genes were associated with an increased risk of psoriasis vulgaris in Chinese patients in Taiwan.OBJECTIVESWe aimed to determine whether genetic polymorphisms of the PSORS1C3 and CDSN genes were associated with an increased risk of psoriasis vulgaris in Chinese patients in Taiwan.We investigated the PSORS1C3 and CDSN genes for disease association by direct sequencing in 178 patients with psoriasis vulgaris and 203 control subjects. Genotyping for HLA-Cw*0602, alpha-helix coiled-coil rod homologue (HCR) gene and single nucleotide polymorphism (SNP) n.9 was also carried out using a sequence-based typing method.METHODSWe investigated the PSORS1C3 and CDSN genes for disease association by direct sequencing in 178 patients with psoriasis vulgaris and 203 control subjects. Genotyping for HLA-Cw*0602, alpha-helix coiled-coil rod homologue (HCR) gene and single nucleotide polymorphism (SNP) n.9 was also carried out using a sequence-based typing method.The PSORS1C3*582A allele, an SNP in the 3'-untranslated region of the PSORS1C3 gene, was a major psoriasis vulgaris susceptibility allele in the Chinese population, and the association was much stronger in patients with early-onset psoriasis vulgaris (22.3% vs. 6.9%, odds ratio = 3.87, P(c) =0.0000072). The frequencies of CDSN*TTC and CDSN*971T were also significantly increased in patients with early-onset psoriasis vulgaris. Moreover, PSORS1C3*582A, SNP n.9*C, Cw*0602 and HCR*WWCC were in near complete linkage disequilibrium (LD) with each other; in contrast, the LD with the CDSN gene was not so strong. SNP n.9*C-Cw*0602-PSORS1C3*582A-HCR*WWCC was a major susceptibility haplotype in patients with early-onset psoriasis vulgaris (P < 10(-7)) and this risk haplotype also carried CDSN*TTC and CDSN*971T.RESULTSThe PSORS1C3*582A allele, an SNP in the 3'-untranslated region of the PSORS1C3 gene, was a major psoriasis vulgaris susceptibility allele in the Chinese population, and the association was much stronger in patients with early-onset psoriasis vulgaris (22.3% vs. 6.9%, odds ratio = 3.87, P(c) =0.0000072). The frequencies of CDSN*TTC and CDSN*971T were also significantly increased in patients with early-onset psoriasis vulgaris. Moreover, PSORS1C3*582A, SNP n.9*C, Cw*0602 and HCR*WWCC were in near complete linkage disequilibrium (LD) with each other; in contrast, the LD with the CDSN gene was not so strong. SNP n.9*C-Cw*0602-PSORS1C3*582A-HCR*WWCC was a major susceptibility haplotype in patients with early-onset psoriasis vulgaris (P < 10(-7)) and this risk haplotype also carried CDSN*TTC and CDSN*971T.The PSORS1C3 and CDSN genes are important psoriasis susceptibility genes in Chinese patients with psoriasis vulgaris.CONCLUSIONSThe PSORS1C3 and CDSN genes are important psoriasis susceptibility genes in Chinese patients with psoriasis vulgaris. Summary Background Besides the HLA‐Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility genes in the PSORS1 locus. The −79C, −26C and +246A alleles of the PSORS1C3 gene, the CDSN*971T allele, CDSN*TTC (619T–1236T–1243C) and CDSN*5 (619T–1240G–1243C) are strongly associated with psoriasis in the caucasian population. Until now, no haplotype study of the PSORS1C3 and CDSN genes has been documented in Chinese patients with psoriasis vulgaris. Objectives We aimed to determine whether genetic polymorphisms of the PSORS1C3 and CDSN genes were associated with an increased risk of psoriasis vulgaris in Chinese patients in Taiwan. Methods We investigated the PSORS1C3 and CDSN genes for disease association by direct sequencing in 178 patients with psoriasis vulgaris and 203 control subjects. Genotyping for HLA‐Cw*0602, α‐helix coiled‐coil rod homologue (HCR) gene and single nucleotide polymorphism (SNP) n.9 was also carried out using a sequence‐based typing method. Results The PSORS1C3*582A allele, an SNP in the 3′‐untranslated region of the PSORS1C3 gene, was a major psoriasis vulgaris susceptibility allele in the Chinese population, and the association was much stronger in patients with early‐onset psoriasis vulgaris (22·3% vs. 6·9%, odds ratio = 3·87, Pc =0·0000072). The frequencies of CDSN*TTC and CDSN*971T were also significantly increased in patients with early‐onset psoriasis vulgaris. Moreover, PSORS1C3*582A, SNP n.9*C, Cw*0602 and HCR*WWCC were in near complete linkage disequilibrium (LD) with each other; in contrast, the LD with the CDSN gene was not so strong. SNP n.9*C–Cw*0602–PSORS1C3*582A–HCR*WWCC was a major susceptibility haplotype in patients with early‐onset psoriasis vulgaris (P < 10−7) and this risk haplotype also carried CDSN*TTC and CDSN*971T. Conclusions The PSORS1C3 and CDSN genes are important psoriasis susceptibility genes in Chinese patients with psoriasis vulgaris. |
Author | Lee, D.D. Wang, W.J. Shiao, Y.M. Lin, M.W. Chen, C.C. Huang, C.H. Chang, Y.T. Yu, C.W. Tsai, S.F. Chou, C.T. Liu, H.N. |
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Keywords | Human psoriasis susceptibility 1 candidate 3 gene HLA-System Skin disease Psoriasis Dermatology Major histocompatibility system α-helix coiled-coil rod homologue gene Genetic determinism Gene psoriasis vulgaris Predisposition HLA- Cw0602 Chinese corneodesmosin gene Class I histocompatibility antigen |
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Notes | ArticleID:BJD7420 ark:/67375/WNG-WF5D89MW-5 istex:F62851DD06AEA79651088F9EC684FAD2556E007A Conflicts of interest None declared. ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
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References_xml | – reference: Hui J, Oka A, Tamiya G et al. Corneodesmosin DNA polymorphisms in MHC haplotypes and Japanese patients with psoriasis. Tissue Antigens 2002; 60:77-83. – reference: Orru S, Giuressi E, Carcassi C et al. Mapping of the major psoriasis-susceptibility locus (PSORS1) in a 70-kb interval around the corneodesmosin gene (CDSN). Am J Hum Genet 2005; 76:164-71. – reference: Ameen M, Allen MH, Fisher SA et al. Corneodesmosin (CDSN) gene association with psoriasis vulgaris in caucasian but not in Japanese populations. Clin Exp Dermatol 2005; 30:414-18. – reference: Elder JT, Nair RP, Henseler T et al. The genetics of psoriasis 2001. Arch Dermatol 2001; 137:1447-54. – reference: Allen M, Ishida-Yamamoto A, McGrath J et al. Corneodesmosin expression in psoriasis vulgaris differs from normal skin and other inflammatory skin disorders. Lab Invest 2001; 81:969-76. – reference: Helms C, Saccone NL, Cao L et al. Localization of PSORS1 to a haplotype block harboring HLA-C and distinct from corneodesmosin and HCR. Hum Genet 2005; 19:1-11. – reference: Mallon E, Newson R, Bunker CB. HLA-Cw6 and the genetic predisposition to psoriasis: a meta-analysis of published serologic studies. J Invest Dermatol 1999; 113:693-5. – reference: Lebwohl M. Psoriasis. Lancet 2003; 361:1197-204. – reference: Zhao JH. 2LD, GENECOUNTING and HAP: computer programs for linkage disequilibrium analysis. Bioinformatics 2004; 20:1325-6. – reference: Chang YT, Shiao YM, Chin PJ et al. Genetic polymorphisms of the HCR gene and a genomic segment in close proximity to HLA-C are associated with psoriasis patients in Taiwan. Br J Dermatol 2004; 150:1104-11. – reference: Capon F, Allen MH, Ameen M et al. A synonymous SNP of the corneodesmosin gene leads to increased mRNA stability and demonstrates association with psoriasis across diverse ethnic groups. 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haplotype analysis supports as the putative susceptibility gene for psoriasis at the MHC locus publication-title: Hum Mol Genet – volume: 57 start-page: 440 year: 2001 end-page: 6 article-title: Comparative association analysis reveals that corneodesmosin is more closely associated with psoriasis than HLA‐Cw*0602‐B*5701 in German families publication-title: Tissue Antigens – volume: 124 start-page: 103 year: 2005 end-page: 6 article-title: The major psoriasis susceptibility locus is not a risk factor for late‐onset psoriasis publication-title: J Invest Dermatol – volume: 62 start-page: 217 year: 2003 end-page: 24 article-title: Corneodesmosin gene: no evidence for gene in North‐eastern Thai psoriasis patients publication-title: Tissue Antigens – volume: 20 start-page: 1325 year: 2004 end-page: 6 article-title: 2LD, GENECOUNTING and HAP: computer programs for linkage disequilibrium analysis publication-title: Bioinformatics – volume: 81 start-page: 969 year: 2001 end-page: 76 article-title: Corneodesmosin expression in psoriasis vulgaris differs from normal skin and other inflammatory skin disorders publication-title: Lab Invest – volume: 125 start-page: 928 year: 2005 end-page: 32 article-title: The region of 150 kb telomeric to HLA‐C is associated with psoriasis in the Jewish population publication-title: J Invest Dermatol – volume: 150 start-page: 1104 year: 2004 end-page: 11 article-title: Genetic polymorphisms of the gene and a genomic segment in close proximity to HLA‐C are associated with psoriasis patients in Taiwan publication-title: Br J Dermatol – volume: 30 start-page: 414 year: 2005 end-page: 18 article-title: Corneodesmosin ( ) gene association with psoriasis vulgaris in caucasian but not in Japanese populations publication-title: Clin Exp Dermatol – volume: 137 start-page: 1447 year: 2001 end-page: 54 article-title: The genetics of psoriasis 2001 publication-title: Arch Dermatol |
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Background Besides the HLA‐Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable... Besides the HLA-Cw*0602 allele, the psoriasis susceptibility 1 candidate 3 (PSORS1C3) and corneodesmosin (CDSN) genes are two probable psoriasis susceptibility... |
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SubjectTerms | Adolescent Adult Aged Aged, 80 and over Alleles Asian Continental Ancestry Group - genetics Biological and medical sciences Child Chinese corneodesmosin gene Dermatology Female Genetic Predisposition to Disease Genotype Glycoproteins - genetics Haplotypes HLA-C Antigens - genetics HLA-Cw0602 Humans Intercellular Signaling Peptides and Proteins Intracellular Signaling Peptides and Proteins Male Medical sciences Middle Aged Polymorphism, Single Nucleotide Proteins - genetics Psoriasis - ethnology Psoriasis - genetics psoriasis susceptibility 1 candidate 3 gene psoriasis vulgaris Psoriasis. Parapsoriasis. Lichen α-helix coiled-coil rod homologue gene |
Title | Psoriasis vulgaris in Chinese individuals is associated with PSORS1C3 and CDSN genes |
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