Graph-cuts based reconstructing patient specific right ventricle: First human study

Right ventricular (RV) function is increasingly recognized to play an important role in the clinical status and long-term outcome in patients with congenital heart disease as well as ischemic cardiomyopathy with left ventricular dysfunction. However, quantification of RV characteristics and function...

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Published in2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society Vol. 2014; pp. 6770 - 6773
Main Authors Zhong, Liang, Wan, Min, Su, Yi, Teo, Soo Kng, Lim, Chi Wan, Zhao, Xiaodan, Zhang, Jun-Mei, Su, Bo Yang, Tan, Ju Le, Tan, Ru San
Format Conference Proceeding Journal Article
LanguageEnglish
Published United States IEEE 01.01.2014
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ISSN1094-687X
1557-170X
DOI10.1109/EMBC.2014.6945182

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Abstract Right ventricular (RV) function is increasingly recognized to play an important role in the clinical status and long-term outcome in patients with congenital heart disease as well as ischemic cardiomyopathy with left ventricular dysfunction. However, quantification of RV characteristics and function are still challenging due to its complex morphology and its thin wall with coarse trabeculations. To assess RV functions quantitatively, establishing the patient-specific model from medical images is a prerequisite task. This study aims to develop a novel method for RV model reconstruction. Magnetic resonance images were acquired and preprocessed. Contours of right ventricle, right atrium and pulmonary artery were manually delineated at all slices and all time frames. The contour coordinates as well as the medical image specifications such as image pixel resolution and slick thickness were exported. The contours were transformed to the correct positions. Reorientation and matching were executed in between neighboring contours; extrapolation and interpolation were conducted upon all contours. After preprocessing, the more dense point set was reconstructed through a variational tool. A Delaunay-based tetrahedral mesh was generated on the region of interest. The weighted minimal surface model was used to describe RV surface. The graphcuts technique, i.e., max-flow/min-cut algorithm, was applied to minimize the energy defined by the model. The reconstructed surface was extracted from the mesh according to the mincut. Smoothing and remeshing were performed. The CPU time to reconstruct the model for one frame was approximately 2 minutes. In 10 consecutive subjects referred for cardiac MRI (80% female), right ventricular volumes were measured using our method against the commercial available CMRtools package. The results demonstrated that there was a significant correlation in end-diastolic and end-systolic volumes between our method and commercial software (r= 0.89 for end-diastolic volume and r=0.79 for end-systolic volume, both P<;0.0001). The time to obtain right ventricular volumes was shorter using our method than commercial one. In conclusion, a new method for right ventricle reconstruction has been developed. We envisage that this automatic modeling tool could be used by radiographer and cardiologists to assess the RV function in diverse heart diseases.
AbstractList Right ventricular (RV) function is increasingly recognized to play an important role in the clinical status and long-term outcome in patients with congenital heart disease as well as ischemic cardiomyopathy with left ventricular dysfunction. However, quantification of RV characteristics and function are still challenging due to its complex morphology and its thin wall with coarse trabeculations. To assess RV functions quantitatively, establishing the patient-specific model from medical images is a prerequisite task. This study aims to develop a novel method for RV model reconstruction. Magnetic resonance images were acquired and preprocessed. Contours of right ventricle, right atrium and pulmonary artery were manually delineated at all slices and all time frames. The contour coordinates as well as the medical image specifications such as image pixel resolution and slick thickness were exported. The contours were transformed to the correct positions. Reorientation and matching were executed in between neighboring contours; extrapolation and interpolation were conducted upon all contours. After preprocessing, the more dense point set was reconstructed through a variational tool. A Delaunay-based tetrahedral mesh was generated on the region of interest. The weighted minimal surface model was used to describe RV surface. The graphcuts technique, i.e., max-flow/min-cut algorithm, was applied to minimize the energy defined by the model. The reconstructed surface was extracted from the mesh according to the mincut. Smoothing and remeshing were performed. The CPU time to reconstruct the model for one frame was approximately 2 minutes. In 10 consecutive subjects referred for cardiac MRI (80% female), right ventricular volumes were measured using our method against the commercial available CMRtools package. The results demonstrated that there was a significant correlation in end-diastolic and end-systolic volumes between our method and commercial software (r= 0.89 for end-diastolic volume and r=0.79 for end-systolic volume, both P<;0.0001). The time to obtain right ventricular volumes was shorter using our method than commercial one. In conclusion, a new method for right ventricle reconstruction has been developed. We envisage that this automatic modeling tool could be used by radiographer and cardiologists to assess the RV function in diverse heart diseases.
Author Chi Wan Lim
Bo Yang Su
Liang Zhong
Yi Su
Soo Kng Teo
Ju Le Tan
Xiaodan Zhao
Jun-Mei Zhang
Min Wan
Ru San Tan
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Snippet Right ventricular (RV) function is increasingly recognized to play an important role in the clinical status and long-term outcome in patients with congenital...
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StartPage 6770
SubjectTerms Adolescent
Adult
Aged
Algorithms
Arteries
Biomedical imaging
Female
Heart
Heart Defects, Congenital - diagnosis
Heart Defects, Congenital - physiopathology
Heart Ventricles - pathology
Humans
Image Interpretation, Computer-Assisted
Image reconstruction
Imaging, Three-Dimensional
Magnetic Resonance Imaging
Male
Middle Aged
Shape
Smoothing methods
Software
Surface reconstruction
Ventricular Function, Right
Young Adult
Title Graph-cuts based reconstructing patient specific right ventricle: First human study
URI https://ieeexplore.ieee.org/document/6945182
https://www.ncbi.nlm.nih.gov/pubmed/25571550
Volume 2014
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