Pathways and substrate-specific regulation of amino acid degradation in Phaeobacter inhibens DSM 17395 (archetype of the marine Roseobacter clade)

• Published in: Environmental microbiology Vol. 16; no. 1; pp. 218 - 238
• Main Authors: Drüppel, Katharina, Hensler, Michael, Trautwein, Kathleen, Koßmehl, Sebastian, Wöhlbrand, Lars, Schmidt-Hohagen, Kerstin, Ulbrich, Marcus, Bergen, Nils, Meier-Kolthoff, Jan P., Göker, Markus, Klenk, Hans-Peter, Schomburg, Dietmar, Rabus, Ralf
• Format: Journal Article
• Language: English
• Published: Oxford Blackwell Publishing Ltd 01.01.2014; Blackwell
• Subjects: Amino Acids - metabolism; Animal and plant ecology; Animal, plant and microbial ecology; Bacterial Proteins - genetics; Bacterial Proteins - metabolism; Biological and medical sciences; Fundamental and applied biological sciences. Psychology; General aspects; Metabolic Networks and Pathways; Microbial ecology; Roseobacter - genetics; Roseobacter - metabolism; Sea water ecosystems; Species Specificity; Synecology; Degradation; Marine environment; Substrate; Bacteria; Aminoacid; Roseobacter

Summary Combining omics and enzymatic approaches, catabolic routes of nine selected amino acids (tryptophan, phenylalanine, methionine, leucine, isoleucine, valine, histidine, lysine and threonine) were elucidated in substrate‐adapted cells of Phaeobacter inhibens DSM 17395 (displaying conspicuous m...