Factors Mediating Learning and Application of Computational Modeling by Life Scientists

This Work-in-Progress paper in the Research Category uses a retrospective mixed-methods study to better understand the factors that mediate learning of computational modeling by life scientists. Key stakeholders, including leading scientists, universities and funding agencies, have promoted computat...

Full description

Saved in:
Bibliographic Details
Published inProceedings - Frontiers in Education Conference pp. 1 - 5
Main Authors Madamanchi, Aasakiran, Cardella, Monica E., Glazier, James A., Umulis, David M.
Format Conference Proceeding
LanguageEnglish
Published IEEE 01.10.2018
Subjects
Online AccessGet full text
ISSN2377-634X
DOI10.1109/FIE.2018.8659328

Cover

Loading…
Abstract This Work-in-Progress paper in the Research Category uses a retrospective mixed-methods study to better understand the factors that mediate learning of computational modeling by life scientists. Key stakeholders, including leading scientists, universities and funding agencies, have promoted computational modeling to enable life sciences research and improve the translation of genetic and molecular biology high-throughput data into clinical results. Software platforms to facilitate computational modeling by biologists who lack advanced mathematical or programming skills have had some success, but none has achieved widespread use among life scientists. Because computational modeling is a core engineering skill of value to other STEM fields, it is critical for engineering and computer science educators to consider how we help students from across STEM disciplines learn computational modeling. Currently we lack sufficient research on how best to help life scientists learn computational modeling.To address this gap, in 2017, we observed a short-format summer course designed for life scientists to learn computational modeling. The course used a simulation environment designed to lower programming barriers. We used semi-structured interviews to understand students' experiences while taking the course and in applying computational modeling after the course. We conducted interviews with graduate students and post-doctoral researchers who had completed the course. We also interviewed students who took the course between 2010 and 2013. Among these past attendees, we selected equal numbers of interview subjects who had and had not successfully published journal articles that incorporated computational modeling. This Work-in-Progress paper applies social cognitive theory to analyze the motivations of life scientists who seek training in computational modeling and their attitudes towards computational modeling. Additionally, we identify important social and environmental variables that influence successful application of computational modeling after course completion. The findings from this study may therefore help us educate biomedical and biological engineering students more effectively.Although this study focuses on life scientists, its findings can inform engineering and computer science education more broadly. Insights from this study may be especially useful in aiding incoming engineering and computer science students who do not have advanced mathematical or programming skills and in preparing undergraduate engineering students for collaborative work with life scientists.
AbstractList This Work-in-Progress paper in the Research Category uses a retrospective mixed-methods study to better understand the factors that mediate learning of computational modeling by life scientists. Key stakeholders, including leading scientists, universities and funding agencies, have promoted computational modeling to enable life sciences research and improve the translation of genetic and molecular biology high-throughput data into clinical results. Software platforms to facilitate computational modeling by biologists who lack advanced mathematical or programming skills have had some success, but none has achieved widespread use among life scientists. Because computational modeling is a core engineering skill of value to other STEM fields, it is critical for engineering and computer science educators to consider how we help students from across STEM disciplines learn computational modeling. Currently we lack sufficient research on how best to help life scientists learn computational modeling.To address this gap, in 2017, we observed a short-format summer course designed for life scientists to learn computational modeling. The course used a simulation environment designed to lower programming barriers. We used semi-structured interviews to understand students' experiences while taking the course and in applying computational modeling after the course. We conducted interviews with graduate students and post-doctoral researchers who had completed the course. We also interviewed students who took the course between 2010 and 2013. Among these past attendees, we selected equal numbers of interview subjects who had and had not successfully published journal articles that incorporated computational modeling. This Work-in-Progress paper applies social cognitive theory to analyze the motivations of life scientists who seek training in computational modeling and their attitudes towards computational modeling. Additionally, we identify important social and environmental variables that influence successful application of computational modeling after course completion. The findings from this study may therefore help us educate biomedical and biological engineering students more effectively.Although this study focuses on life scientists, its findings can inform engineering and computer science education more broadly. Insights from this study may be especially useful in aiding incoming engineering and computer science students who do not have advanced mathematical or programming skills and in preparing undergraduate engineering students for collaborative work with life scientists.
Author Madamanchi, Aasakiran
Glazier, James A.
Umulis, David M.
Cardella, Monica E.
Author_xml – sequence: 1
  givenname: Aasakiran
  surname: Madamanchi
  fullname: Madamanchi, Aasakiran
  organization: Department of Agricultural & Biological Engineering, Purdue University, West Lafayette, Indiana, USA
– sequence: 2
  givenname: Monica E.
  surname: Cardella
  fullname: Cardella, Monica E.
  organization: School of Engineering, Purdue University, West Lafayette, Indiana, USA
– sequence: 3
  givenname: James A.
  surname: Glazier
  fullname: Glazier, James A.
  organization: Department of Intelligent Systems Engineering, Biocomplexity Institute Indiana University, Bloomington, Indiana, USA
– sequence: 4
  givenname: David M.
  surname: Umulis
  fullname: Umulis, David M.
  organization: Department of Agricultural & Biological Engineering, Purdue University, West Lafayette, Indiana, USA
BookMark eNotkDFPwzAUhA0CibZ0R2LxH0jwi-3YHquoKZVSMQCCrXKcF2SUOlEchv57Wuh0d_pON9yc3IQ-ICEPwFIAZp7K7TrNGOhU59LwTF-RpVEaJNc5gBL5NZllXKkk5-Lzjsxj_GaMnaCakY_SuqkfI91h4-3kwxet0I7hbGxo6GoYOu9OoA-0b2nRH4af6S_aju76Brtzsz7SyrdIX53HMPk4xXty29ou4vKiC_Jert-K56R62WyLVZV4UHJKMmlMKxCdMmilFI2RzsiaWQEAVjElnETtnM1b1YLjUkBtanRWowbBgC_I4_-uR8T9MPqDHY_7yw_8F-RMU9E
ContentType Conference Proceeding
DBID 6IE
6IH
CBEJK
RIE
RIO
DOI 10.1109/FIE.2018.8659328
DatabaseName IEEE Electronic Library (IEL) Conference Proceedings
IEEE Proceedings Order Plan (POP) 1998-present by volume
IEEE Xplore All Conference Proceedings
IEEE Xplore
IEEE Proceedings Order Plans (POP) 1998-present
DatabaseTitleList
Database_xml – sequence: 1
  dbid: RIE
  name: IEEE Electronic Library (IEL)
  url: https://proxy.k.utb.cz/login?url=https://ieeexplore.ieee.org/
  sourceTypes: Publisher
DeliveryMethod fulltext_linktorsrc
Discipline Engineering
Biology
EISBN 9781538611746
1538611740
EISSN 2377-634X
EndPage 5
ExternalDocumentID 8659328
Genre orig-research
GroupedDBID -~X
29O
6IE
6IF
6IH
6IK
6IL
6IM
6IN
AAJGR
AAWTH
ABLEC
ADZIZ
AFFNX
ALMA_UNASSIGNED_HOLDINGS
BEFXN
BFFAM
BGNUA
BKEBE
BPEOZ
CBEJK
CHZPO
IEGSK
IJVOP
IPLJI
OCL
RIE
RIL
RIO
RNS
ID FETCH-LOGICAL-i175t-2599f4eec79ea554d95c95b0a4111a7074c5e8cca6f7f1c3541b9beca8e814013
IEDL.DBID RIE
IngestDate Wed Aug 27 02:51:28 EDT 2025
IsPeerReviewed false
IsScholarly true
Language English
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-i175t-2599f4eec79ea554d95c95b0a4111a7074c5e8cca6f7f1c3541b9beca8e814013
PageCount 5
ParticipantIDs ieee_primary_8659328
PublicationCentury 2000
PublicationDate 2018-Oct.
PublicationDateYYYYMMDD 2018-10-01
PublicationDate_xml – month: 10
  year: 2018
  text: 2018-Oct.
PublicationDecade 2010
PublicationTitle Proceedings - Frontiers in Education Conference
PublicationTitleAbbrev FIE
PublicationYear 2018
Publisher IEEE
Publisher_xml – name: IEEE
SSID ssj0003867
Score 2.0883017
Snippet This Work-in-Progress paper in the Research Category uses a retrospective mixed-methods study to better understand the factors that mediate learning of...
SourceID ieee
SourceType Publisher
StartPage 1
SubjectTerms Approaches to Interdisciplinary Education. Secondary Topics: Engineering Education Research
Biology
Computational modeling
Discipline Specific Issues: Bioengineering and/or Biomedical Engineering
Interviews
Mathematical model
Programming profession
Training
Title Factors Mediating Learning and Application of Computational Modeling by Life Scientists
URI https://ieeexplore.ieee.org/document/8659328
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV3NS8MwFH9sA0Ev6jbxmxw82q5d0zQ5iqxMceLB4W4jTV9lCJtod5h_vS9pNz_w4K0JhJS88D7y3vv9AC4CtHZVB16AJve4EqGnCqU9bSy-WCZ47ECSRvdiOOa3k3jSgMtNLwwiuuIz9O2ny-XnC7O0T2U9KWJyN2QTmhS4Vb1aG60bSZGs05CB6qU3A1u3Jf16zQ_yFGc70l0YrXetSkZe_GWZ-ebjFyDjf39rD7pfXXrsYWN_9qGB8zZsVeSSqzbsfIMa7MBTWhHrsJHj5qA5VkOrPjM9z9nVVyKbLQpWkT3UD4XMEqbZtnWWrdjdrEDmNEJJN-S9C-N08Hg99GpSBW9GnkLpUbijCo5oEoWafIlcxYaEEmhOWk8n5FGYGCXJVRRJEZoo5mGmSNBaonTB2AG05os5HgKLwjAiVS_6KjTcGCEtjQcN-pxWxyY4go49rOlrhZsxrc_p-O_pE9i2AqsK5U6hVb4t8YwMfpmdO0l_Asqnqyo
linkProvider IEEE
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV3PT8IwFH5BjFEvKmD8bQ8e3dhY17VHY1hAGfEAkRvZus4Qk2F0HPCv97UboMaDt61Js6Wved9r33vfB3DjKI2rsWM5SqYWFcy1RCZiK5aaXyxh1DckSdGQ9cb0YeJPanC77oVRSpniM2XrR5PLT-dyoa_K2pz5GG7wLdhG3Kei7NZa-12Ps2CViHREO-x3deUWt6tZP-RTDHqEBxCtvlsWjbzaiyKx5ecvSsb__tghtDZ9euRpjUBHUFN5A3ZKecllA_a_kQ024TkspXVIZNQ5cIxU5KovJM5TcrdJZZN5Rkq5h-qqkGjJNN24TpIlGcwyRYxPKHCPfLRgHHZH9z2rklWwZhgrFBYeeERGlZKBUDFGE6nwJZrFiSn6vTjAmEL6iqNlWRZkrvR86iYCTR1zxc1x7Bjq-TxXJ0A81_XQ2bOOcCWVknEt5IEvHYqzfemcQlMv1vStZM6YVut09vfwNez2RtFgOugPH89hTxuvLJu7gHrxvlCXCP9FcmWs_gX1mK56
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Abook&rft.genre=proceeding&rft.title=Proceedings+-+Frontiers+in+Education+Conference&rft.atitle=Factors+Mediating+Learning+and+Application+of+Computational+Modeling+by+Life+Scientists&rft.au=Madamanchi%2C+Aasakiran&rft.au=Cardella%2C+Monica+E.&rft.au=Glazier%2C+James+A.&rft.au=Umulis%2C+David+M.&rft.date=2018-10-01&rft.pub=IEEE&rft.eissn=2377-634X&rft.spage=1&rft.epage=5&rft_id=info:doi/10.1109%2FFIE.2018.8659328&rft.externalDocID=8659328