Intensive Hypermethylation of the CpG Island of Ras Association Domain Family 1A in Hepatitis B Virus-associated Hepatocellular Carcinomas
Purpose and Experimental Design : The human Ras association domain family 1A gene ( RASSF1A ) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B,...
Saved in:
Published in | Clinical cancer research Vol. 9; no. 9; pp. 3376 - 3382 |
---|---|
Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
Philadelphia, PA
American Association for Cancer Research
15.08.2003
|
Subjects | |
Online Access | Get full text |
ISSN | 1078-0432 1557-3265 |
Cover
Loading…
Abstract | Purpose and Experimental Design : The human Ras association domain family 1A gene ( RASSF1A ) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B, HepG 2 , SK-HEP-1, and Huh-7) and a cohort of 43 hepatitis B virus-associated hepatocellular carcinoma (HCC) tissues and their corresponding
nontumor tissue specimens.
Results: The methylation of the CpG islands in the RASSF1A promoter was not detected in 4 samples of normal liver tissue or 10 samples of peripheral blood mononuclear cells from normal
subjects. However, the CpG islands were completely methylated, and transcription of the RASSF1A was silenced in the four cell lines. Treatment with the DNA methylation inhibitor 5-aza-2′-deoxycytidine reactivated the
expression of RASSF1A in the Hep3B and HepG2 cells. In 41 of 43 (95%) HCC specimens studied, the promoter region of RASSF1A was intensively methylated at its CpG sites. Although heterogeneous methylation was also detected in 16 of the 23 (70%) corresponding
nontumorous tissues analyzed, the level of methylation was significantly lower than in the corresponding tumor tissues.
Conclusions: HCC has the highest incidence of promoter methylation of RASSF1A among all malignancies yet reported suggesting that hypermethylation of the CpG island promoter of RASSF1A may play an important pathological role in this tumor. |
---|---|
AbstractList | The human Ras association domain family 1A gene (RASSF1A) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B, HepG(2), SK-HEP-1, and Huh-7) and a cohort of 43 hepatitis B virus-associated hepatocellular carcinoma (HCC) tissues and their corresponding nontumor tissue specimens.
The methylation of the CpG islands in the RASSF1A promoter was not detected in 4 samples of normal liver tissue or 10 samples of peripheral blood mononuclear cells from normal subjects. However, the CpG islands were completely methylated, and transcription of the RASSF1A was silenced in the four cell lines. Treatment with the DNA methylation inhibitor 5-aza-2'-deoxycytidine reactivated the expression of RASSF1A in the Hep3B and HepG2 cells. In 41 of 43 (95%) HCC specimens studied, the promoter region of RASSF1A was intensively methylated at its CpG sites. Although heterogeneous methylation was also detected in 16 of the 23 (70%) corresponding nontumorous tissues analyzed, the level of methylation was significantly lower than in the corresponding tumor tissues.
HCC has the highest incidence of promoter methylation of RASSF1A among all malignancies yet reported suggesting that hypermethylation of the CpG island promoter of RASSF1A may play an important pathological role in this tumor. The human Ras association domain family 1A gene (RASSF1A) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B, HepG(2), SK-HEP-1, and Huh-7) and a cohort of 43 hepatitis B virus-associated hepatocellular carcinoma (HCC) tissues and their corresponding nontumor tissue specimens.PURPOSE AND EXPERIMENTAL DESIGNThe human Ras association domain family 1A gene (RASSF1A) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B, HepG(2), SK-HEP-1, and Huh-7) and a cohort of 43 hepatitis B virus-associated hepatocellular carcinoma (HCC) tissues and their corresponding nontumor tissue specimens.The methylation of the CpG islands in the RASSF1A promoter was not detected in 4 samples of normal liver tissue or 10 samples of peripheral blood mononuclear cells from normal subjects. However, the CpG islands were completely methylated, and transcription of the RASSF1A was silenced in the four cell lines. Treatment with the DNA methylation inhibitor 5-aza-2'-deoxycytidine reactivated the expression of RASSF1A in the Hep3B and HepG2 cells. In 41 of 43 (95%) HCC specimens studied, the promoter region of RASSF1A was intensively methylated at its CpG sites. Although heterogeneous methylation was also detected in 16 of the 23 (70%) corresponding nontumorous tissues analyzed, the level of methylation was significantly lower than in the corresponding tumor tissues.RESULTSThe methylation of the CpG islands in the RASSF1A promoter was not detected in 4 samples of normal liver tissue or 10 samples of peripheral blood mononuclear cells from normal subjects. However, the CpG islands were completely methylated, and transcription of the RASSF1A was silenced in the four cell lines. Treatment with the DNA methylation inhibitor 5-aza-2'-deoxycytidine reactivated the expression of RASSF1A in the Hep3B and HepG2 cells. In 41 of 43 (95%) HCC specimens studied, the promoter region of RASSF1A was intensively methylated at its CpG sites. Although heterogeneous methylation was also detected in 16 of the 23 (70%) corresponding nontumorous tissues analyzed, the level of methylation was significantly lower than in the corresponding tumor tissues.HCC has the highest incidence of promoter methylation of RASSF1A among all malignancies yet reported suggesting that hypermethylation of the CpG island promoter of RASSF1A may play an important pathological role in this tumor.CONCLUSIONSHCC has the highest incidence of promoter methylation of RASSF1A among all malignancies yet reported suggesting that hypermethylation of the CpG island promoter of RASSF1A may play an important pathological role in this tumor. Purpose and Experimental Design : The human Ras association domain family 1A gene ( RASSF1A ) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the promoter region of RASSF1A using bisulfite sequencing and PCR-RFLP in four liver cancer cell lines (Hep3B, HepG 2 , SK-HEP-1, and Huh-7) and a cohort of 43 hepatitis B virus-associated hepatocellular carcinoma (HCC) tissues and their corresponding nontumor tissue specimens. Results: The methylation of the CpG islands in the RASSF1A promoter was not detected in 4 samples of normal liver tissue or 10 samples of peripheral blood mononuclear cells from normal subjects. However, the CpG islands were completely methylated, and transcription of the RASSF1A was silenced in the four cell lines. Treatment with the DNA methylation inhibitor 5-aza-2′-deoxycytidine reactivated the expression of RASSF1A in the Hep3B and HepG2 cells. In 41 of 43 (95%) HCC specimens studied, the promoter region of RASSF1A was intensively methylated at its CpG sites. Although heterogeneous methylation was also detected in 16 of the 23 (70%) corresponding nontumorous tissues analyzed, the level of methylation was significantly lower than in the corresponding tumor tissues. Conclusions: HCC has the highest incidence of promoter methylation of RASSF1A among all malignancies yet reported suggesting that hypermethylation of the CpG island promoter of RASSF1A may play an important pathological role in this tumor. |
Author | Winnie Yeo Nathalie Wong Phillip J. Johnson Paul B. S. Lai Sheng Zhong Mandy W. Tang |
Author_xml | – sequence: 1 surname: SHENG ZHONG fullname: SHENG ZHONG organization: Department of Clinical Oncology, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong – sequence: 2 surname: WINNIE YEO fullname: WINNIE YEO organization: Department of Clinical Oncology, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong – sequence: 3 givenname: Mandy W surname: TANG fullname: TANG, Mandy W organization: Department of Clinical Oncology, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong – sequence: 4 givenname: Nathalie surname: WONG fullname: WONG, Nathalie organization: Department of Clinical Oncology, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong – sequence: 5 givenname: Paul B. S surname: LAI fullname: LAI, Paul B. S organization: Department of Surgery, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong – sequence: 6 givenname: Phillip J surname: JOHNSON fullname: JOHNSON, Phillip J organization: Department of Clinical Oncology, Sir Y. K. Pao Centre for Cancer, The Chinese University of Hong Kong, Prince of Wales Hospital, Hong-Kong |
BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15106530$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/12960125$$D View this record in MEDLINE/PubMed |
BookMark | eNpF0F9r2zAQAHBTWvr_Kwy9bHsy6K8VP2bZ0gQChdL21Vys86xhy57OXslX2KeeSjKKDqTT_XRIusnOwxDwLLsWxthcycKcpzW3i5xrJa-yG6JfnAstuL7MroQsCy6kuc7-bsOEgfwfZJvDiLHHqT10MPkhsKFhU4tsNT6wLXUQ3PvOExBbEg21P6LvQw8-sDX0vjswsWQp2eCYipMn9o29-jhTDqcT6I7FocaumzuIbAWx9iE1obvsooGO8P4032Yv6x_Pq02-e3zYrpa7vJVFOeV7cJIvsNZu7zTHvXFam4W1DXJruCkbrRTKRVmkkMZZKB3wEkVpNTYarbrNvhz7jnH4PSNNVe_p_T4QcJipsqoQ1kqR4KcTnPc9umqMvod4qP7_XgKfTwCohq6JEGpPH84IXhjFk_t6dK3_2b75iFWdJMaIhOn5bVWmoZQt1D_W0Yof |
ContentType | Journal Article |
Copyright | 2004 INIST-CNRS |
Copyright_xml | – notice: 2004 INIST-CNRS |
DBID | IQODW CGR CUY CVF ECM EIF NPM 7X8 |
DatabaseName | Pascal-Francis Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic |
DatabaseTitleList | MEDLINE MEDLINE - Academic |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Medicine |
EISSN | 1557-3265 |
EndPage | 3382 |
ExternalDocumentID | 12960125 15106530 9_9_3376 |
Genre | Research Support, Non-U.S. Gov't Journal Article |
GroupedDBID | - 08R 29B 2WC 34G 39C 3O- 53G 55 5GY 5RE 5VS AAPBV ABFLS ABOCM ACIWK ACPRK ADACO ADBBV ADBIT AENEX AETEA AFFNX AFRAH ALMA_UNASSIGNED_HOLDINGS BAWUL C1A CS3 DIK DU5 E3Z EBS EJD F5P FH7 FRP GJ GX1 H13 H~9 IH2 KQ8 L7B LSO MVM O0- OHT OK1 P0W P2P RCR RHF RHI RNS SJN UDS VH1 W2D WOQ X7M XFK XJT ZA5 ZCG ZGI --- .55 .GJ 18M 1CY 2FS 4H- 6J9 AAFWJ AAJMC ACGFO ADCOW ADNWM AFHIN AFOSN AFUMD AI. BR6 BTFSW IQODW J5H QTD TR2 W8F WHG YKV ACSVP CGR CUY CVF ECM EIF NPM VXZ 7X8 |
ID | FETCH-LOGICAL-h269t-bad208ec4dbd40eb5d445877fe075059f433e289689625d7a9da09e1974ef4e73 |
ISSN | 1078-0432 |
IngestDate | Tue Aug 05 11:11:23 EDT 2025 Wed Feb 19 01:32:32 EST 2025 Mon Jul 21 09:11:54 EDT 2025 Fri Jan 15 19:23:43 EST 2021 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 9 |
Keywords | Human Nucleotide sequence Pathogenesis Transcription promoter Liver Orthohepadnavirus Hepatic disease Hepatocellular carcinoma Malignant tumor CpG island Virus Associated virus Gene silencing GC rich sequence Hepadnaviridae DNA Digestive diseases Hepatitis B virus Methylation Tumor suppressor gene |
Language | English |
License | CC BY 4.0 |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-h269t-bad208ec4dbd40eb5d445877fe075059f433e289689625d7a9da09e1974ef4e73 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
PMID | 12960125 |
PQID | 73617721 |
PQPubID | 23479 |
PageCount | 7 |
ParticipantIDs | proquest_miscellaneous_73617721 pubmed_primary_12960125 pascalfrancis_primary_15106530 highwire_cancerresearch_9_9_3376 |
ProviderPackageCode | RHF RHI |
PublicationCentury | 2000 |
PublicationDate | 2003-08-15 |
PublicationDateYYYYMMDD | 2003-08-15 |
PublicationDate_xml | – month: 08 year: 2003 text: 2003-08-15 day: 15 |
PublicationDecade | 2000 |
PublicationPlace | Philadelphia, PA |
PublicationPlace_xml | – name: Philadelphia, PA – name: United States |
PublicationTitle | Clinical cancer research |
PublicationTitleAlternate | Clin Cancer Res |
PublicationYear | 2003 |
Publisher | American Association for Cancer Research |
Publisher_xml | – name: American Association for Cancer Research |
SSID | ssj0014104 |
Score | 1.9948409 |
Snippet | Purpose and Experimental Design : The human Ras association domain family 1A gene ( RASSF1A ) is a newly isolated tumor suppressor gene. In this study, we... The human Ras association domain family 1A gene (RASSF1A) is a newly isolated tumor suppressor gene. In this study, we analyzed the methylation status of the... |
SourceID | proquest pubmed pascalfrancis highwire |
SourceType | Aggregation Database Index Database Publisher |
StartPage | 3376 |
SubjectTerms | Adult Aged Biological and medical sciences Carcinoma, Hepatocellular - genetics Carcinoma, Hepatocellular - pathology Carcinoma, Hepatocellular - virology Cell Line Cell Line, Tumor Cohort Studies CpG Islands DNA Methylation Female Gastroenterology. Liver. Pancreas. Abdomen Genes, Tumor Suppressor Hepatitis B virus - metabolism Humans Liver Neoplasms - genetics Liver Neoplasms - pathology Liver Neoplasms - virology Liver. Biliary tract. Portal circulation. Exocrine pancreas Male Medical sciences Middle Aged Polymorphism, Restriction Fragment Length Promoter Regions, Genetic Reverse Transcriptase Polymerase Chain Reaction Sulfites - pharmacology Tumor Suppressor Proteins - genetics Tumors |
Title | Intensive Hypermethylation of the CpG Island of Ras Association Domain Family 1A in Hepatitis B Virus-associated Hepatocellular Carcinomas |
URI | http://clincancerres.aacrjournals.org/content/9/9/3376.abstract https://www.ncbi.nlm.nih.gov/pubmed/12960125 https://www.proquest.com/docview/73617721 |
Volume | 9 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3fb5swELbWPkx7mfZ76bbOD3tDTIBNCI9ptbWa1L4s1aK9IBsbBamFKJBJ7Z_Qv3p32BgSrdI2JULBhgj4Ppm703d3hHySQR5p9FRzVLZzEUo_lWHqJzM5DWRUYFF0VFtcTs-v-LdlvNzLLmnl5_zuj3kl_4MqjAGumCX7D8i6P4UB-A34whYQhu1fYTzoz1fgTm6wG_TttbMB0aQ8XZ95ZYPqxa7qiGg8MeDhqfpGlC7IEc4x-LHSqLFuy8Y78X6Vm23j92eAadpN1hjs79SrOTYiqpzCqC940Cdb5siojWfrCbm488-VlQF_X2n73hyCtj_Kqiod2RY2mn0BN3DruXBQryO-xMD_tT28D10wjMWa5E272gZY3pezneU4HbEuHS2tjJlGMSNc1zcdsGCygFtp8qf3imf3UwfkgIXYWuFs6RRAqHDlRpJqrgILyNrjR-WiUS0rGnhqhel08rAr0pkki2fkqfUl6NwQ4zl5pKsX5PGFVUu8JPeOH3SfH7QuKPCDAj-o4QeOAD_oiB_U8IMaftBwTmHH8YOe0H1-0F1-0IEfr8jV1y-L03Pf9t7wV9E0bX0pVBTMdM6VVDzQMlacx7MkKTTamHFacMY0OOtT-EaxSkSqRJDqENxTXXCdsNfksKor_ZZQLsA14kWeKyY4TM1SWSglOQwylSd8Qmj_rDNDzJ6XWQofxH1CjncwyNamFEsG9ioWVw4m5GMPSgbrI96nqHS9bbKEgY2eROGEvDFYDedarI8enHlHngy0fU8O281WfwAbtJXHHZN-A-4xkK8 |
linkProvider | Geneva Foundation for Medical Education and Research |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Intensive+hypermethylation+of+the+CpG+island+of+Ras+association+domain+family+1A+in+hepatitis+B+virus-associated+hepatocellular+carcinomas&rft.jtitle=Clinical+cancer+research&rft.au=Zhong%2C+Sheng&rft.au=Yeo%2C+Winnie&rft.au=Tang%2C+Mandy+W&rft.au=Wong%2C+Nathalie&rft.date=2003-08-15&rft.issn=1078-0432&rft.volume=9&rft.issue=9&rft.spage=3376&rft_id=info%3Apmid%2F12960125&rft.externalDocID=12960125 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1078-0432&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1078-0432&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1078-0432&client=summon |