Combined genome and transcriptome sequencing to investigate the plant cell wall degrading enzyme system in the thermophilic fungus Malbranchea cinnamomea

• Published in: Biotechnology for biofuels Vol. 10; no. 1; p. 265
• Main Authors: Hüttner, Silvia, Nguyen, Thanh Thuy, Granchi, Zoraide, Chin-A-Woeng, Thomas, Ahrén, Dag, Larsbrink, Johan, Thanh, Vu Nguyen, Olsson, Lisbeth
• Format: Journal Article
• Language: English
• Published: England BioMed Central Ltd 13.11.2017; BioMed Central; BMC
• Subjects: Bacteria, Thermophilic; Biodegradation; Biologi; Biological Sciences; Biomass; biorefining; Carbohydrate-active enzymes; Carbohydrates; Carbon; Carbon sources; Cell walls; Cellular control mechanisms; Cellulase; Cellulose; chitinase; cutinase; Deoxyribonucleic acid; DNA; Enzymes; Fungi; Gene expression; gene expression regulation; Gene sequencing; genes; Genetic aspects; Genetics; Genetics and Genomics; Genetik; Genetik och genomik; Genomes; Genotype; glucose; glycosides; lignocellulases; Lignocellulose; Malbranchea; Malbranchea cinnamomea; Malbranchea pulchella; Mass transfer; Natural Sciences; Naturvetenskap; Neurospora crassa; Plant biomass; Polymers; Properties; protein secretion; Rice; Risk reduction; saccharification; Thermophilic fungi; transcriptomics; Wheat bran; Xylan; xylanases; Xylan; Malbranchea pulchella; Cellulase; Plant biomass; Carbohydrate-active enzymes; Wheat bran

Genome and transcriptome sequencing has greatly facilitated the understanding of biomass-degrading mechanisms in a number of fungal species. The information obtained enables the investigation and discovery of genes encoding proteins involved in plant cell wall degradation, which are crucial for sacc...