Reconstructing Native American population history
A survey of genetic variation in Native American and Siberian populations reveals that Native Americans are descended from at least three streams of gene flow from Asia: after the initial peopling of the continent there was a southward expansion facilitated by the coast, with sequential population s...
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| Published in | Nature (London) Vol. 488; no. 7411; pp. 370 - 374 |
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| Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
London
Nature Publishing Group UK
16.08.2012
Nature Publishing Group |
| Subjects | |
| Online Access | Get full text |
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| Abstract | A survey of genetic variation in Native American and Siberian populations reveals that Native Americans are descended from at least three streams of gene flow from Asia: after the initial peopling of the continent there was a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America.
The roads to the Americas
The settlement of the Americas occurred at least 15,000 years ago by means of the Beringia land bridge that existed between Asia and America during the ice ages. Key questions about how many migrations were involved and subsequent dispersal patterns within the Americas remain unresolved. This new survey of genetic variation in Native American and Siberian populations shows that Native Americans descend from at least three waves of migration from Asia. After the initial peopling of the continent there was a southward expansion along the coast, with sequential population splits and little gene flow after divergence, particularly in South America.
The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved
1
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. One contentious issue is whether the settlement occurred by means of a single
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,
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migration or multiple streams of migration from Siberia
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,
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,
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. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call ‘First American’. However, speakers of Eskimo–Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. |
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| AbstractList | The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America.The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved 1 – 5 . One contentious issue is whether the settlement occurred via a single 6 – 8 or multiple streams of migration from Siberia 9 – 15 . The pattern of dispersals within the Americas is also poorly understood. To address these questions at higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. We show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call “First American”. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan-speakers on both sides of the Panama Isthmus, who have ancestry from both North and South America. The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. A survey of genetic variation in Native American and Siberian populations reveals that Native Americans are descended from at least three streams of gene flow from Asia: after the initial peopling of the continent there was a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. The roads to the Americas The settlement of the Americas occurred at least 15,000 years ago by means of the Beringia land bridge that existed between Asia and America during the ice ages. Key questions about how many migrations were involved and subsequent dispersal patterns within the Americas remain unresolved. This new survey of genetic variation in Native American and Siberian populations shows that Native Americans descend from at least three waves of migration from Asia. After the initial peopling of the continent there was a southward expansion along the coast, with sequential population splits and little gene flow after divergence, particularly in South America. The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved 1 , 2 , 3 , 4 , 5 . One contentious issue is whether the settlement occurred by means of a single 6 , 7 , 8 migration or multiple streams of migration from Siberia 9 , 10 , 11 , 12 , 13 , 14 , 15 . The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call ‘First American’. However, speakers of Eskimo–Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America. A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved. One contentious issue is whether the settlement occurred by means of a single migration or multiple streams of migration from Siberia. The pattern of dispersals within the Americas is also poorly understood. To address these questions at a higher resolution than was previously possible, we assembled data from 52 Native American and 17 Siberian groups genotyped at 364,470 single nucleotide polymorphisms. Here we show that Native Americans descend from at least three streams of Asian gene flow. Most descend entirely from a single ancestral population that we call 'First American'. However, speakers of Eskimo-Aleut languages from the Arctic inherit almost half their ancestry from a second stream of Asian gene flow, and the Na-Dene-speaking Chipewyan from Canada inherit roughly one-tenth of their ancestry from a third stream. We show that the initial peopling followed a southward expansion facilitated by the coast, with sequential population splits and little gene flow after divergence, especially in South America.A major exception is in Chibchan speakers on both sides of the Panama isthmus, who have ancestry from both North and South America. [PUBLICATION ABSTRACT] |
| Audience | Academic |
| Author | Hünemeier, Tábita Rodríguez-Cruz, Maricela Canizales-Quinteros, Samuel Gómez-Vázquez, Maria José Fernandez-Lopez, Juan Carlos Coral-Vazquez, Ramón Villena, Mercedes Gallo, Carla Bailliet, Graciela Jimenez-Sanchez, Gerardo Carracedo, Ángel Freimer, Nelson B. Ruiz-Linares, Andrés García, Luis F. Dib, Juan C. Sukernik, Rem I. Price, Alkes L. Mazieres, Stéphane Vasquez, René Alkorta-Aranburu, Gorka Pauls, David Rojas, Winston Kidd, Judith Rothhammer, Francisco Aguilar-Salinas, Carlos Patterson, Nick Silva-Zolezzi, Irma Barrantes, Ramiro Larrouy, Georges Blair, Silvia Contreras, Alejandra V. Lopez-Alarcón, Mardia Osipova, Ludmila Riba, Laura Witonsky, David B. Bedoya, Gabriel Labuda, Damian Bravi, Claudio M. Parra, Maria V. Kidd, Kenneth Di Rienzo, Anna Klitz, William Fedorova, Sardana A. Molina, Julio Duque, Constanza Ray, Nicolas Tandon, Arti Maestre, Amanda Poletti, Giovanni Campbell, Desmond Excoffier, Laurent Triana, Omar Bortolini, Maria Cátira Salas, Antonio Petzl-Erler, María Luiza Canto-Cetina, Thelma Acuña-Alonzo, Victor Reich, David Sal |
| AuthorAffiliation | 14 Departamento de Endocrinología y Metabolismo de Lípidos and Unidad de Biología Molecular y Medicina Genómica, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, México City, México 19 National Institute of Genomic Medicine, México 31 Center for Human Genetic Research, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA 18 Laboratorio de Biología de la Reproducción, Departamento de Salud Reproductiva y Genética, Centro de Investigaciones Regionales, Mérida Yucatán, México 37 Center for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California, USA 15 Departamento de Biología, Facultad de Química, UNAM, México City, México 32 Computational and Molecular Population Genetics Lab, Institute of Ecology and Evolution, University of Bern, Switzerland 12 Departamento de Genética, Universidade Federal do Paraná, Curitiba Brazil 7 Universidad de Antioquia, Medellín, Colombia 25 Laboratory of Human Molecular Genetics, Institu |
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Investigaciones del Hombre en el Desierto, Arica 1001236, Chile – sequence: 55 givenname: Jean-Michel surname: Dugoujon fullname: Dugoujon, Jean-Michel organization: Anthropologie Moléculaire et Imagerie de Synthèse, CNRS UMR 5288, Université Paul Sabatier Toulouse III, Toulouse 31000, France – sequence: 56 givenname: Georges surname: Larrouy fullname: Larrouy, Georges organization: Anthropologie Moléculaire et Imagerie de Synthèse, CNRS UMR 5288, Université Paul Sabatier Toulouse III, Toulouse 31000, France – sequence: 57 givenname: William surname: Klitz fullname: Klitz, William organization: School of Public Health, University of California – sequence: 58 givenname: Damian surname: Labuda fullname: Labuda, Damian organization: Département de Pédiatrie, Centre de Recherche du CHU Sainte-Justine, Université de Montréal, Montréal, Quebec H3T 1C5, Canada – sequence: 59 givenname: Judith surname: Kidd fullname: Kidd, Judith organization: Department of Genetics, Yale University School of Medicine – sequence: 60 givenname: Kenneth surname: Kidd fullname: Kidd, Kenneth organization: Department of Genetics, Yale University School of Medicine – sequence: 61 givenname: Anna surname: Di Rienzo fullname: Di Rienzo, Anna organization: Department of Human Genetics, University of Chicago – sequence: 62 givenname: Nelson B. surname: Freimer fullname: Freimer, Nelson B. organization: Center for Neurobehavioral Genetics, Semel Institute for Neuroscience and Human Behavior, University of California Los Angeles – sequence: 63 givenname: Alkes L. surname: Price fullname: Price, Alkes L. organization: Broad Institute of Harvard and the Massachusetts Institute of Technology, Departments of Epidemiology and Biostatistics, Harvard School of Public Health – sequence: 64 givenname: Andrés surname: Ruiz-Linares fullname: Ruiz-Linares, Andrés email: a.ruizlin@ucl.ac.uk organization: Department of Genetics, Evolution and Environment, University College London WC1E 6BT |
| BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26220186$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/22801491$$D View this record in MEDLINE/PubMed https://hal.science/hal-00726962$$DView record in HAL |
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| Keywords | Single nucleotide polymorphism Case history Peopling Native species |
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| Snippet | A survey of genetic variation in Native American and Siberian populations reveals that Native Americans are descended from at least three streams of gene flow... The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved.... The peopling of the Americas has been the subject of extensive genetic, archaeological and linguistic research; however, central questions remain unresolved 1... |
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| SubjectTerms | 631/181/19 631/208/457 Americas Asia Biological and medical sciences Biological anthropology Cluster Analysis Emigration and Immigration - history Emigration and Immigration - statistics & numerical data Fundamental and applied biological sciences. Psychology Gene Flow Genealogy Genetic diversity Genetics Genetics of eukaryotes. Biological and molecular evolution Genetics, Population Genomes History, Ancient Human Human genetics Humanities and Social Sciences Humans Indians, North American - genetics Indians, North American - history Indigenous peoples Inuit letter Life Sciences Mitochondrial DNA Models, Genetic multidisciplinary Native Americans Native North Americans Natural history Phylogeny Polymorphism, Single Nucleotide - genetics Population genetics Population genetics, reproduction patterns Science Science (multidisciplinary) Siberia Studies Trees |
| Title | Reconstructing Native American population history |
| URI | https://link.springer.com/article/10.1038/nature11258 https://www.ncbi.nlm.nih.gov/pubmed/22801491 https://www.proquest.com/docview/1035291933 https://www.proquest.com/docview/1034199597 https://www.proquest.com/docview/1439235386 https://hal.science/hal-00726962 https://pubmed.ncbi.nlm.nih.gov/PMC3615710 |
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