Microgravity induces changes in microsome-associated proteins of Arabidopsis seedlings grown on board the international space station
The "GENARA A" experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modul...
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Published in | PloS one Vol. 9; no. 3; p. e91814 |
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Main Authors | , , , , , , , , , , , |
Format | Journal Article |
Language | English |
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11.03.2014
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Abstract | The "GENARA A" experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modular Cultivation System (EMCS) under microgravity or on a 1 g centrifuge, or on the ground. Proteins associated to membranes were selectively extracted from microsomes and identified and quantified through LC-MS-MS using a label-free method. Among the 1484 proteins identified and quantified in the 3 conditions mentioned above, 80 membrane-associated proteins were significantly more abundant in seedlings grown under microgravity in space than under 1 g (space and ground) and 69 were less abundant. Clustering of these proteins according to their predicted function indicates that proteins associated to auxin metabolism and trafficking were depleted in the microsomal fraction in µg space conditions, whereas proteins associated to stress responses, defence and metabolism were more abundant in µg than in 1 g indicating that microgravity is perceived by plants as a stressful environment. These results clearly indicate that a global membrane proteomics approach gives a snapshot of the cell status and its signaling activity in response to microgravity and highlight the major processes affected. |
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AbstractList | The “GENARA A” experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modular Cultivation System (EMCS) under microgravity or on a 1 g centrifuge, or on the ground. Proteins associated to membranes were selectively extracted from microsomes and identified and quantified through LC-MS-MS using a label-free method. Among the 1484 proteins identified and quantified in the 3 conditions mentioned above, 80 membrane-associated proteins were significantly more abundant in seedlings grown under microgravity in space than under 1 g (space and ground) and 69 were less abundant. Clustering of these proteins according to their predicted function indicates that proteins associated to auxin metabolism and trafficking were depleted in the microsomal fraction in µg space conditions, whereas proteins associated to stress responses, defence and metabolism were more abundant in µg than in 1 g indicating that microgravity is perceived by plants as a stressful environment. These results clearly indicate that a global membrane proteomics approach gives a snapshot of the cell status and its signaling activity in response to microgravity and highlight the major processes affected. The "GENARA A" experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modular Cultivation System (EMCS) under microgravity or on a 1 g centrifuge, or on the ground. Proteins associated to membranes were selectively extracted from microsomes and identified and quantified through LC-MS-MS using a label-free method. Among the 1484 proteins identified and quantified in the 3 conditions mentioned above, 80 membrane-associated proteins were significantly more abundant in seedlings grown under microgravity in space than under 1 g (space and ground) and 69 were less abundant. Clustering of these proteins according to their predicted function indicates that proteins associated to auxin metabolism and trafficking were depleted in the microsomal fraction in [micro]g space conditions, whereas proteins associated to stress responses, defence and metabolism were more abundant in [micro]g than in 1 g indicating that microgravity is perceived by plants as a stressful environment. These results clearly indicate that a global membrane proteomics approach gives a snapshot of the cell status and its signaling activity in response to microgravity and highlight the major processes affected. The ''GENARA A'' experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modular Cultivation System (EMCS) under microgravity or on a 1 g centrifuge, or on the ground. Proteins associated to membranes were selectively extracted from microsomes and identified and quantified through LC-MS-MS using a label-free method. Among the 1484 proteins identified and quantified in the 3 conditions mentioned above, 80 membrane-associated proteins were significantly more abundant in seedlings grown under microgravity in space than under 1 g (space and ground) and 69 were less abundant. Clustering of these proteins according to their predicted function indicates that proteins associated to auxin metabolism and trafficking were depleted in the microsomal fraction in mg space conditions, whereas proteins associated to stress responses, defence and metabolism were more abundant in mg than in 1 g indicating that microgravity is perceived by plants as a stressful environment. These results clearly indicate that a global membrane proteomics approach gives a snapshot of the cell status and its signaling activity in response to microgravity and highlight the major processes affected. The “GENARA A” experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on board the International Space Station (ISS). For this purpose, 12-day-old seedlings were grown either in space, in the European Modular Cultivation System (EMCS) under microgravity or on a 1 g centrifuge, or on the ground. Proteins associated to membranes were selectively extracted from microsomes and identified and quantified through LC-MS-MS using a label-free method. Among the 1484 proteins identified and quantified in the 3 conditions mentioned above, 80 membrane-associated proteins were significantly more abundant in seedlings grown under microgravity in space than under 1 g (space and ground) and 69 were less abundant. Clustering of these proteins according to their predicted function indicates that proteins associated to auxin metabolism and trafficking were depleted in the microsomal fraction in µg space conditions, whereas proteins associated to stress responses, defence and metabolism were more abundant in µg than in 1 g indicating that microgravity is perceived by plants as a stressful environment. These results clearly indicate that a global membrane proteomics approach gives a snapshot of the cell status and its signaling activity in response to microgravity and highlight the major processes affected. |
Audience | Academic |
Author | Mazars, Christian Pichereaux, Carole Le Disquet, Isabel Medina, Francisco Javier Brière, Christian Carnero-Diaz, Eugénie Eche, Brigitte Grat, Sabine Boucheron-Dubuisson, Elodie Pereda-Loth, Veronica Graziana, Annick Rossignol, Michel |
AuthorAffiliation | 1 Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France 3 GSBMS, Université de Toulouse, Toulouse, France 5 Centro de Investigaciones Biologicas CSIC, Madrid, Spain 2 Institut de Pharmacologie et de Biologie Structurale IPBS CNRS, Fédération de Recherche 3450 Agrobiosciences Interactions et Biodiversités Plateforme Protéomique Génopole Toulouse Midi Pyrénées, Toulouse, France University of Firenze, Italy 4 UR5-PCMP-EAC 7180 CNRS, Université Pierre et Marie Curie-Sorbonne Universités, Paris, France |
AuthorAffiliation_xml | – name: University of Firenze, Italy – name: 1 Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France – name: 3 GSBMS, Université de Toulouse, Toulouse, France – name: 2 Institut de Pharmacologie et de Biologie Structurale IPBS CNRS, Fédération de Recherche 3450 Agrobiosciences Interactions et Biodiversités Plateforme Protéomique Génopole Toulouse Midi Pyrénées, Toulouse, France – name: 4 UR5-PCMP-EAC 7180 CNRS, Université Pierre et Marie Curie-Sorbonne Universités, Paris, France – name: 5 Centro de Investigaciones Biologicas CSIC, Madrid, Spain |
Author_xml | – sequence: 1 givenname: Christian surname: Mazars fullname: Mazars, Christian organization: Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France – sequence: 2 givenname: Christian surname: Brière fullname: Brière, Christian organization: Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France – sequence: 3 givenname: Sabine surname: Grat fullname: Grat, Sabine organization: Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France – sequence: 4 givenname: Carole surname: Pichereaux fullname: Pichereaux, Carole organization: Institut de Pharmacologie et de Biologie Structurale IPBS CNRS, Fédération de Recherche 3450 Agrobiosciences Interactions et Biodiversités Plateforme Protéomique Génopole Toulouse Midi Pyrénées, Toulouse, France – sequence: 5 givenname: Michel surname: Rossignol fullname: Rossignol, Michel organization: Institut de Pharmacologie et de Biologie Structurale IPBS CNRS, Fédération de Recherche 3450 Agrobiosciences Interactions et Biodiversités Plateforme Protéomique Génopole Toulouse Midi Pyrénées, Toulouse, France – sequence: 6 givenname: Veronica surname: Pereda-Loth fullname: Pereda-Loth, Veronica organization: GSBMS, Université de Toulouse, Toulouse, France – sequence: 7 givenname: Brigitte surname: Eche fullname: Eche, Brigitte organization: GSBMS, Université de Toulouse, Toulouse, France – sequence: 8 givenname: Elodie surname: Boucheron-Dubuisson fullname: Boucheron-Dubuisson, Elodie organization: UR5-PCMP-EAC 7180 CNRS, Université Pierre et Marie Curie-Sorbonne Universités, Paris, France – sequence: 9 givenname: Isabel surname: Le Disquet fullname: Le Disquet, Isabel organization: UR5-PCMP-EAC 7180 CNRS, Université Pierre et Marie Curie-Sorbonne Universités, Paris, France – sequence: 10 givenname: Francisco Javier surname: Medina fullname: Medina, Francisco Javier organization: Centro de Investigaciones Biologicas CSIC, Madrid, Spain – sequence: 11 givenname: Annick surname: Graziana fullname: Graziana, Annick organization: Laboratoire de Recherches en Sciences Végétales, Université de Toulouse UPS, CNRS UMR5546, Castanet-Tolosan, France – sequence: 12 givenname: Eugénie surname: Carnero-Diaz fullname: Carnero-Diaz, Eugénie organization: UR5-PCMP-EAC 7180 CNRS, Université Pierre et Marie Curie-Sorbonne Universités, Paris, France |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/24618597$$D View this record in MEDLINE/PubMed https://hal.sorbonne-universite.fr/hal-01366771$$DView record in HAL |
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Copyright | COPYRIGHT 2014 Public Library of Science 2014 Mazars et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. Attribution 2014 Mazars et al 2014 Mazars et al |
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DocumentTitleAlternate | Membrane-Proteomics from GENARA A Space Experiment |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Competing Interests: The authors declare to have no competing interests. Conceived and designed the experiments: CM VPL EBD FJM AG ECD. Performed the experiments: CM SG CP MR VPL BE EBD ILD FJM AG ECD. Analyzed the data: CM CB MR. Contributed reagents/materials/analysis tools: CM SG VPL BE EBD ILD FJM AG ECD. Wrote the paper: CM CB. Proteomics: CP MR. |
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PublicationPlace_xml | – name: United States – name: San Francisco – name: San Francisco, USA |
PublicationTitle | PloS one |
PublicationTitleAlternate | PLoS One |
PublicationYear | 2014 |
Publisher | Public Library of Science Public Library of Science (PLoS) |
Publisher_xml | – name: Public Library of Science – name: Public Library of Science (PLoS) |
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Snippet | The "GENARA A" experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on... The “GENARA A” experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on... The ''GENARA A'' experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on... The “GENARA A” experiment was designed to monitor global changes in the proteome of membranes of Arabidopsis thaliana seedlings subjected to microgravity on... |
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SubjectTerms | Arabidopsis Arabidopsis - growth & development Arabidopsis - metabolism Arabidopsis Proteins - metabolism Arabidopsis thaliana Biology Biosynthesis Botanics Clustering Cultivation Cytochrome Enzymes Gene expression Gravity Ground stations Homeostasis International Space Station Life Sciences Membrane Proteins - metabolism Membranes Metabolism Microgravity Microsomes Microsomes - metabolism Modular systems Phenotype Physiological aspects Protein Transport Proteins Proteomics Seedlings Seedlings - growth & development Signal transduction Signaling Space Flight Space stations Studies Vegetal Biology Weightlessness |
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Title | Microgravity induces changes in microsome-associated proteins of Arabidopsis seedlings grown on board the international space station |
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