Identification of the significant pathways of Banxia Houpu decoction in the treatment of depression based on network pharmacology

Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still remain unclear. Network Pharmacology (NP) approach was used to explore the potential molecular mechanisms of BXHPD in treating depression. Poten...

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Published inPloS one Vol. 15; no. 9; p. e0239843
Main Authors Chen, Zi-ying, Xie, Dan-feng, Liu, Zhi-yuan, Zhong, Yong-qi, Zeng, Jing-yan, Chen, Zheng, Chen, Xin-lin
Format Journal Article
LanguageEnglish
Published United States Public Library of Science 30.09.2020
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Abstract Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still remain unclear. Network Pharmacology (NP) approach was used to explore the potential molecular mechanisms of BXHPD in treating depression. Potential active compounds of BXHPD were obtained from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform Database. STRING database was used to build a interaction network between the active compounds and target genes associated with depression. The topological features of nodes were visualized and calculated. Significant pathways and biological functions were identified using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. A total of 44 active compounds were obtained from BXHPD, and 121 potential target genes were considered to be therapeutically relevant. Pathway analysis indicated that MAPK signaling pathway, ErbB signaling pathway, HIF-1 signaling pathway and PI3K-Akt pathway were significant pathways in depression. They were mainly involved in promoting nerve growth and nutrition and alleviating neuroinflammatory conditions. The result provided some potential ways for modern medicine in the treatment of depression.
AbstractList Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still remain unclear. Network Pharmacology (NP) approach was used to explore the potential molecular mechanisms of BXHPD in treating depression. Potential active compounds of BXHPD were obtained from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform Database. STRING database was used to build a interaction network between the active compounds and target genes associated with depression. The topological features of nodes were visualized and calculated. Significant pathways and biological functions were identified using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. A total of 44 active compounds were obtained from BXHPD, and 121 potential target genes were considered to be therapeutically relevant. Pathway analysis indicated that MAPK signaling pathway, ErbB signaling pathway, HIF-1 signaling pathway and PI3K-Akt pathway were significant pathways in depression. They were mainly involved in promoting nerve growth and nutrition and alleviating neuroinflammatory conditions. The result provided some potential ways for modern medicine in the treatment of depression.
Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still remain unclear. Network Pharmacology (NP) approach was used to explore the potential molecular mechanisms of BXHPD in treating depression. Potential active compounds of BXHPD were obtained from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform Database. STRING database was used to build a interaction network between the active compounds and target genes associated with depression. The topological features of nodes were visualized and calculated. Significant pathways and biological functions were identified using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. A total of 44 active compounds were obtained from BXHPD, and 121 potential target genes were considered to be therapeutically relevant. Pathway analysis indicated that MAPK signaling pathway, ErbB signaling pathway, HIF-1 signaling pathway and PI3K-Akt pathway were significant pathways in depression. They were mainly involved in promoting nerve growth and nutrition and alleviating neuroinflammatory conditions. The result provided some potential ways for modern medicine in the treatment of depression.Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still remain unclear. Network Pharmacology (NP) approach was used to explore the potential molecular mechanisms of BXHPD in treating depression. Potential active compounds of BXHPD were obtained from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform Database. STRING database was used to build a interaction network between the active compounds and target genes associated with depression. The topological features of nodes were visualized and calculated. Significant pathways and biological functions were identified using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. A total of 44 active compounds were obtained from BXHPD, and 121 potential target genes were considered to be therapeutically relevant. Pathway analysis indicated that MAPK signaling pathway, ErbB signaling pathway, HIF-1 signaling pathway and PI3K-Akt pathway were significant pathways in depression. They were mainly involved in promoting nerve growth and nutrition and alleviating neuroinflammatory conditions. The result provided some potential ways for modern medicine in the treatment of depression.
Audience Academic
Author Liu, Zhi-yuan
Chen, Xin-lin
Zeng, Jing-yan
Xie, Dan-feng
Chen, Zheng
Chen, Zi-ying
Zhong, Yong-qi
AuthorAffiliation University of Colorado Denver Skaggs School of Pharmacy and Pharmaceutical Sciences, UNITED STATES
3 School of Basic Medical Science, Guangzhou University of Chinese Medicine, Guangzhou, China
2 Department of Stomatology, The Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, China
1 Shenzhen Clinical College, Guangzhou University of Chinese Medicine, Guangzhou, China
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Snippet Banxia Houpu decoction (BXHPD) has been used to treat depression in clinical practice for centuries. However, the pharmacological mechanisms of BXHPD still...
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SubjectTerms 1-Phosphatidylinositol 3-kinase
AKT protein
Antidepressants
Biology and life sciences
Care and treatment
Chinese medicine
Computer and Information Sciences
Databases, Factual
Depression (Mood disorder)
Depression - drug therapy
Depression - metabolism
Depression - pathology
Drugs, Chinese Herbal - chemistry
Drugs, Chinese Herbal - pharmacology
Drugs, Chinese Herbal - therapeutic use
Encyclopedias
ErbB protein
Gene Ontology
Gene Regulatory Networks - drug effects
Genes
Genomes
Herbal medicine
Humans
Inflammation
MAP kinase
Medicine and Health Sciences
Medicine, Chinese Traditional
Mental depression
Metabolic Networks and Pathways - drug effects
Metabolism
Methods
Molecular modelling
Nutrition
Pharmacokinetics
Pharmacological research
Pharmacology
Protein Interaction Maps - drug effects
Research and Analysis Methods
Signal transduction
Signal Transduction - drug effects
Signaling
Software
Traditional Chinese medicine
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Title Identification of the significant pathways of Banxia Houpu decoction in the treatment of depression based on network pharmacology
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http://dx.doi.org/10.1371/journal.pone.0239843
Volume 15
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