Annotation of Differential Gene Expression in Small Yellow Follicles of a Broiler-Type Strain of Taiwan Country Chickens in Response to Acute Heat Stress

This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C...

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Published inPloS one Vol. 10; no. 11; p. e0143418
Main Authors Cheng, Chuen-Yu, Tu, Wei-Lin, Wang, Shih-Han, Tang, Pin-Chi, Chen, Chih-Feng, Chen, Hsin-Hsin, Lee, Yen-Pai, Chen, Shuen-Ei, Huang, San-Yuan
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Published United States Public Library of Science 20.11.2015
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Abstract This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C acute heat stress for 2 h without recovery (H2R0), with 2-h recovery (H2R2), and with 6-h recovery (H2R6). Small yellow follicles were collected for RNA isolation and microarray analysis at the end of each time point. Results showed that 69, 51, and 76 genes were upregulated and 58, 15, 56 genes were downregulated after heat treatment of H2R0, H2R2, and H2R6, respectively, using a cutoff value of two-fold or higher. Gene ontology analysis revealed that these differentially expressed genes are associated with the biological processes of cell communication, developmental process, protein metabolic process, immune system process, and response to stimuli. Upregulation of heat shock protein 25, interleukin 6, metallopeptidase 1, and metalloproteinase 13, and downregulation of type II alpha 1 collagen, discoidin domain receptor tyrosine kinase 2, and Kruppel-like factor 2 suggested that acute heat stress induces proteolytic disintegration of the structural matrix and inflamed damage and adaptive responses of gene expression in the follicle cells. These suggestions were validated through gene expression, using quantitative real-time polymerase chain reaction. Functional annotation clarified that interleukin 6-related pathways play a critical role in regulating acute heat stress responses in the small yellow follicles of TCC hens.
AbstractList This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C acute heat stress for 2 h without recovery (H2R0), with 2-h recovery (H2R2), and with 6-h recovery (H2R6). Small yellow follicles were collected for RNA isolation and microarray analysis at the end of each time point. Results showed that 69, 51, and 76 genes were upregulated and 58, 15, 56 genes were downregulated after heat treatment of H2R0, H2R2, and H2R6, respectively, using a cutoff value of two-fold or higher. Gene ontology analysis revealed that these differentially expressed genes are associated with the biological processes of cell communication, developmental process, protein metabolic process, immune system process, and response to stimuli. Upregulation of heat shock protein 25, interleukin 6, metallopeptidase 1, and metalloproteinase 13, and downregulation of type II alpha 1 collagen, discoidin domain receptor tyrosine kinase 2, and Kruppel-like factor 2 suggested that acute heat stress induces proteolytic disintegration of the structural matrix and inflamed damage and adaptive responses of gene expression in the follicle cells. These suggestions were validated through gene expression, using quantitative real-time polymerase chain reaction. Functional annotation clarified that interleukin 6-related pathways play a critical role in regulating acute heat stress responses in the small yellow follicles of TCC hens.
This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C acute heat stress for 2 h without recovery (H2R0), with 2-h recovery (H2R2), and with 6-h recovery (H2R6). Small yellow follicles were collected for RNA isolation and microarray analysis at the end of each time point. Results showed that 69, 51, and 76 genes were upregulated and 58, 15, 56 genes were downregulated after heat treatment of H2R0, H2R2, and H2R6, respectively, using a cutoff value of two-fold or higher. Gene ontology analysis revealed that these differentially expressed genes are associated with the biological processes of cell communication, developmental process, protein metabolic process, immune system process, and response to stimuli. Upregulation of heat shock protein 25, interleukin 6, metallopeptidase 1, and metalloproteinase 13, and downregulation of type II alpha 1 collagen, discoidin domain receptor tyrosine kinase 2, and Kruppel-like factor 2 suggested that acute heat stress induces proteolytic disintegration of the structural matrix and inflamed damage and adaptive responses of gene expression in the follicle cells. These suggestions were validated through gene expression, using quantitative real-time polymerase chain reaction. Functional annotation clarified that interleukin 6-related pathways play a critical role in regulating acute heat stress responses in the small yellow follicles of TCC hens.This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in response to acute heat stress. Twelve 30-wk-old TCC hens were divided into four groups: control hens maintained at 25°C and hens subjected to 38°C acute heat stress for 2 h without recovery (H2R0), with 2-h recovery (H2R2), and with 6-h recovery (H2R6). Small yellow follicles were collected for RNA isolation and microarray analysis at the end of each time point. Results showed that 69, 51, and 76 genes were upregulated and 58, 15, 56 genes were downregulated after heat treatment of H2R0, H2R2, and H2R6, respectively, using a cutoff value of two-fold or higher. Gene ontology analysis revealed that these differentially expressed genes are associated with the biological processes of cell communication, developmental process, protein metabolic process, immune system process, and response to stimuli. Upregulation of heat shock protein 25, interleukin 6, metallopeptidase 1, and metalloproteinase 13, and downregulation of type II alpha 1 collagen, discoidin domain receptor tyrosine kinase 2, and Kruppel-like factor 2 suggested that acute heat stress induces proteolytic disintegration of the structural matrix and inflamed damage and adaptive responses of gene expression in the follicle cells. These suggestions were validated through gene expression, using quantitative real-time polymerase chain reaction. Functional annotation clarified that interleukin 6-related pathways play a critical role in regulating acute heat stress responses in the small yellow follicles of TCC hens.
Audience Academic
Author Chen, Chih-Feng
Huang, San-Yuan
Tu, Wei-Lin
Cheng, Chuen-Yu
Wang, Shih-Han
Tang, Pin-Chi
Chen, Hsin-Hsin
Chen, Shuen-Ei
Lee, Yen-Pai
AuthorAffiliation 2 Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
4 Department of Veterinary Medicine, National Chung Hsing University, Taichung, Taiwan
3 Center for the Integrative and Evolutionary Galliformes Genomics, iEGG Center, National Chung Hsing University, Taichung, Taiwan
1 Department of Animal Science, National Chung Hsing University, Taichung, Taiwan
Wageningen UR Livestock Research, NETHERLANDS
5 Center of Nanoscience and Nanotechnology, National Chung Hsing University, Taichung, Taiwan
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– name: Wageningen UR Livestock Research, NETHERLANDS
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2015 Cheng et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
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Competing Interests: The authors have declared that no competing interests exist.
Conceived and designed the experiments: PCT CFC YPL SEC SYH. Performed the experiments: CYC WLT SHW HHC. Analyzed the data: CYC WLT. Contributed reagents/materials/analysis tools: CFC YPL SYH. Wrote the paper: CYC WLT SEC SYH.
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Snippet This study investigated global gene expression in the small yellow follicles (6-8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in...
This study investigated global gene expression in the small yellow follicles (6–8 mm diameter) of broiler-type B strain Taiwan country chickens (TCCs) in...
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StartPage e0143418
SubjectTerms Agricultural biotechnology
Animal sciences
Animals
Annotations
Biological activity
Body Temperature
Cell interactions
Chickens
Chickens - physiology
Collagen
Collagen (type II)
Communications systems
Disintegration
DNA microarrays
DNA Primers
Environmental aspects
Female
Follicles
Galliformes
Gene expression
Gene Expression Profiling
Gene Expression Regulation
Genes
Genetic aspects
Genomics
Heat
Heat shock proteins
Heat stress
Heat tolerance
Heat treatment
Heat-Shock Response - genetics
Hot Temperature
Humidity
Immune system
Inflammation
Interleukin 6
Interleukin-6 - metabolism
Krueppel-like factor
Metalloproteinase
Oligonucleotide Array Sequence Analysis
Ovarian Follicle - metabolism
Ovarian Follicle - pathology
Physiological aspects
Polymerase chain reaction
Poultry
Protein-tyrosine kinase receptors
Proteins
Proteolysis
Real-Time Polymerase Chain Reaction
Recovery
Reverse Transcriptase Polymerase Chain Reaction
Ribonucleic acid
RNA
RNA - analysis
RNA polymerase
Strain
Stress, Physiological
Taiwan
Tyrosine
Up-Regulation
Zoology
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Title Annotation of Differential Gene Expression in Small Yellow Follicles of a Broiler-Type Strain of Taiwan Country Chickens in Response to Acute Heat Stress
URI https://www.ncbi.nlm.nih.gov/pubmed/26587838
https://www.proquest.com/docview/1735002381
https://www.proquest.com/docview/1736415273
https://pubmed.ncbi.nlm.nih.gov/PMC4654548
https://doaj.org/article/c1953e2633c44ad38e8847c007e69c6b
http://dx.doi.org/10.1371/journal.pone.0143418
Volume 10
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