Persistence of Pathogenic and Non-Pathogenic Escherichia coli Strains in Various Tropical Agricultural Soils of India
The persistence of Shiga-like toxin producing E. coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables growing on them. However, the survival of STEC strains in Indian tropical soils is not yet understood thoroughly. Additionally how the surviva...
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Published in | PloS one Vol. 10; no. 6; p. e0130038 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
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United States
Public Library of Science
23.06.2015
Public Library of Science (PLoS) |
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Abstract | The persistence of Shiga-like toxin producing E. coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables growing on them. However, the survival of STEC strains in Indian tropical soils is not yet understood thoroughly. Additionally how the survival of STEC strain in soil diverges with non-pathogenic and genetically modified E. coli strains is also not yet assessed. Hence in the present study, the survival pattern of STEC strain (O157-TNAU) was compared with non-pathogenic (MTCC433) and genetically modified (DH5α) strains on different tropical agricultural soils and on a vegetable growing medium, cocopeat under controlled condition. The survival pattern clearly discriminated DH5α from MTCC433 and O157-TNAU, which had shorter life (40 days) than those compared (60 days). Similarly, among the soils assessed, the red laterite and tropical latosol supported longer survival of O157-TNAU and MTCC433 as compared to wetland and black cotton soils. In cocopeat, O157 recorded significantly longer survival than other two strains. The survival data were successfully analyzed using Double-Weibull model and the modeling parameters were correlated with soil physico-chemical and biological properties using principal component analysis (PCA). The PCA of all the three strains revealed that pH, microbial biomass carbon, dehydrogenase activity and available N and P contents of the soil decided the survival of E. coli strains in those soils and cocopeat. The present research work suggests that the survival of O157 differs in tropical Indian soils due to varied physico-chemical and biological properties and the survival is much shorter than those reported in temperate soils. As the survival pattern of non-pathogenic strain, MTCC433 is similar to O157-TNAU in tropical soils, the former can be used as safe model organism for open field studies. |
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AbstractList | The persistence of Shiga-like toxin producing E. coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables growing on them. However, the survival of STEC strains in Indian tropical soils is not yet understood thoroughly. Additionally how the survival of STEC strain in soil diverges with non-pathogenic and genetically modified E. coli strains is also not yet assessed. Hence in the present study, the survival pattern of STEC strain (O157-TNAU) was compared with non-pathogenic (MTCC433) and genetically modified (DH5α) strains on different tropical agricultural soils and on a vegetable growing medium, cocopeat under controlled condition. The survival pattern clearly discriminated DH5α from MTCC433 and O157-TNAU, which had shorter life (40 days) than those compared (60 days). Similarly, among the soils assessed, the red laterite and tropical latosol supported longer survival of O157-TNAU and MTCC433 as compared to wetland and black cotton soils. In cocopeat, O157 recorded significantly longer survival than other two strains. The survival data were successfully analyzed using Double-Weibull model and the modeling parameters were correlated with soil physico-chemical and biological properties using principal component analysis (PCA). The PCA of all the three strains revealed that pH, microbial biomass carbon, dehydrogenase activity and available N and P contents of the soil decided the survival of E. coli strains in those soils and cocopeat. The present research work suggests that the survival of O157 differs in tropical Indian soils due to varied physico-chemical and biological properties and the survival is much shorter than those reported in temperate soils. As the survival pattern of non-pathogenic strain, MTCC433 is similar to O157-TNAU in tropical soils, the former can be used as safe model organism for open field studies. The persistence of Shiga-like toxin producing E. coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables growing on them. However, the survival of STEC strains in Indian tropical soils is not yet understood thoroughly. Additionally how the survival of STEC strain in soil diverges with non-pathogenic and genetically modified E. coli strains is also not yet assessed. Hence in the present study, the survival pattern of STEC strain (O157-TNAU) was compared with non-pathogenic (MTCC433) and genetically modified (DH5[alpha]) strains on different tropical agricultural soils and on a vegetable growing medium, cocopeat under controlled condition. The survival pattern clearly discriminated DH5[alpha] from MTCC433 and O157-TNAU, which had shorter life (40 days) than those compared (60 days). Similarly, among the soils assessed, the red laterite and tropical latosol supported longer survival of O157-TNAU and MTCC433 as compared to wetland and black cotton soils. In cocopeat, O157 recorded significantly longer survival than other two strains. The survival data were successfully analyzed using Double-Weibull model and the modeling parameters were correlated with soil physico-chemical and biological properties using principal component analysis (PCA). The PCA of all the three strains revealed that pH, microbial biomass carbon, dehydrogenase activity and available N and P contents of the soil decided the survival of E. coli strains in those soils and cocopeat. The present research work suggests that the survival of O157 differs in tropical Indian soils due to varied physico-chemical and biological properties and the survival is much shorter than those reported in temperate soils. As the survival pattern of non-pathogenic strain, MTCC433 is similar to O157-TNAU in tropical soils, the former can be used as safe model organism for open field studies. The persistence of Shiga-like toxin producing E . coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables growing on them. However, the survival of STEC strains in Indian tropical soils is not yet understood thoroughly. Additionally how the survival of STEC strain in soil diverges with non-pathogenic and genetically modified E . coli strains is also not yet assessed. Hence in the present study, the survival pattern of STEC strain (O157-TNAU) was compared with non-pathogenic (MTCC433) and genetically modified (DH5α) strains on different tropical agricultural soils and on a vegetable growing medium, cocopeat under controlled condition. The survival pattern clearly discriminated DH5α from MTCC433 and O157-TNAU, which had shorter life (40 days) than those compared (60 days). Similarly, among the soils assessed, the red laterite and tropical latosol supported longer survival of O157-TNAU and MTCC433 as compared to wetland and black cotton soils. In cocopeat, O157 recorded significantly longer survival than other two strains. The survival data were successfully analyzed using Double-Weibull model and the modeling parameters were correlated with soil physico-chemical and biological properties using principal component analysis (PCA). The PCA of all the three strains revealed that pH, microbial biomass carbon, dehydrogenase activity and available N and P contents of the soil decided the survival of E . coli strains in those soils and cocopeat. The present research work suggests that the survival of O157 differs in tropical Indian soils due to varied physico-chemical and biological properties and the survival is much shorter than those reported in temperate soils. As the survival pattern of non-pathogenic strain, MTCC433 is similar to O157-TNAU in tropical soils, the former can be used as safe model organism for open field studies. |
Audience | Academic |
Author | Balachandar, D Naganandhini, S Uyttendaele, M Kennedy, Z John |
AuthorAffiliation | 1 Department of Agricultural Microbiology, Tamil Nadu Agricultural University, Coimbatore 641003, India Cornell University, UNITED STATES 3 Laboratory of Food Microbiology and Food Preservation, Department of Food Safety and Food Quality, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium 2 Post Harvest Technology Centre, Tamil Nadu Agricultural University, Coimbatore 641003, India |
AuthorAffiliation_xml | – name: 1 Department of Agricultural Microbiology, Tamil Nadu Agricultural University, Coimbatore 641003, India – name: Cornell University, UNITED STATES – name: 2 Post Harvest Technology Centre, Tamil Nadu Agricultural University, Coimbatore 641003, India – name: 3 Laboratory of Food Microbiology and Food Preservation, Department of Food Safety and Food Quality, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium |
Author_xml | – sequence: 1 givenname: S surname: Naganandhini fullname: Naganandhini, S organization: Department of Agricultural Microbiology, Tamil Nadu Agricultural University, Coimbatore 641003, India – sequence: 2 givenname: Z John surname: Kennedy fullname: Kennedy, Z John organization: Post Harvest Technology Centre, Tamil Nadu Agricultural University, Coimbatore 641003, India – sequence: 3 givenname: M surname: Uyttendaele fullname: Uyttendaele, M organization: Laboratory of Food Microbiology and Food Preservation, Department of Food Safety and Food Quality, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium – sequence: 4 givenname: D surname: Balachandar fullname: Balachandar, D organization: Department of Agricultural Microbiology, Tamil Nadu Agricultural University, Coimbatore 641003, India |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/26101887$$D View this record in MEDLINE/PubMed |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Competing Interests: The authors have declared that no competing interests exist. Conceived and designed the experiments: DB ZJK MU. Performed the experiments: SN DB. Analyzed the data: DB ZJK. Contributed reagents/materials/analysis tools: SN ZJK DB. Wrote the paper: DB ZJK. |
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Snippet | The persistence of Shiga-like toxin producing E. coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables... The persistence of Shiga-like toxin producing E . coli (STEC) strains in the agricultural soil creates serious threat to human health through fresh vegetables... |
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StartPage | e0130038 |
SubjectTerms | Agricultural land Agriculture Analysis Biological properties Cattle Composting Cotton Culture Media Data processing E coli Escherichia coli Escherichia coli - genetics Escherichia coli - isolation & purification Escherichia coli - pathogenicity Food contamination & poisoning Genetic modification Genetically modified organisms Green Fluorescent Proteins - metabolism Health aspects Health risks India Irrigation Manures Microorganisms Principal Component Analysis Principal components analysis Salmonella Salmonella enterica Shiga-like toxin Soil chemistry Soil Microbiology Soil properties Soils Strains (organisms) Survival Tropical Climate Tropical environments Tropical soils Vegetables |
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Title | Persistence of Pathogenic and Non-Pathogenic Escherichia coli Strains in Various Tropical Agricultural Soils of India |
URI | https://www.ncbi.nlm.nih.gov/pubmed/26101887 https://www.proquest.com/docview/1690656115/abstract/ https://search.proquest.com/docview/1691287266 https://pubmed.ncbi.nlm.nih.gov/PMC4477969 https://doaj.org/article/0e56c9dbdbf64408a928b8e5778b3cdb http://dx.doi.org/10.1371/journal.pone.0130038 |
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