Detection of mitochondrial DNA with 4977 bp deletion in leukocytes of patients with ischemic stroke
Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown. Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 con...
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Published in | PloS one Vol. 13; no. 2; p. e0193175 |
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Abstract | Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown.
Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977.
For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke.
In conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke. |
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AbstractList | Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA.sup.4977). The role of mtDNA.sup.4977 in ischemic stroke is unknown. Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA.sup.4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA.sup.4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA.sup.4977. For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA.sup.4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA.sup.4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA.sup.4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA.sup.4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke. In conclusion, there was no apparent association between mtDNA.sup.4977 deletion and cerebral infarction. Undetectable mtDNA.sup.4977 may be a marker or risk factor for ischemic stroke. Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown. Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977. For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke. In conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke. Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA.sup.4977). The role of mtDNA.sup.4977 in ischemic stroke is unknown. Methods Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA.sup.4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA.sup.4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA.sup.4977. Results For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA.sup.4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA.sup.4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA.sup.4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA.sup.4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke. Conclusion In conclusion, there was no apparent association between mtDNA.sup.4977 deletion and cerebral infarction. Undetectable mtDNA.sup.4977 may be a marker or risk factor for ischemic stroke. Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown.BACKGROUNDCoronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown.Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977.METHODSReal-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977.For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke.RESULTSFor 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke.In conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke.CONCLUSIONIn conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke. Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown. Methods Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977. Results For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041–0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke. Conclusion In conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke. Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA 4977 ). The role of mtDNA 4977 in ischemic stroke is unknown. Methods Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA 4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA 4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA 4977 . Results For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA 4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA 4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA 4977 (OR: 0.181, 95% CI 0.041–0.798, p = 0.024). Additionally, mtDNA 4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke. Conclusion In conclusion, there was no apparent association between mtDNA 4977 deletion and cerebral infarction. Undetectable mtDNA 4977 may be a marker or risk factor for ischemic stroke. Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is unknown.Real-time quantitative PCR was performed to quantify total mtDNA and mtDNA4977 in leukocytes in 283 ischemic stroke cases and 135 controls. Ratios of mtDNA4977 to total-mtDNA and total-mtDNA to nuclear-DNA were calculated. Nested PCR and Sanger sequencing were used to confirm undetectable levels of mtDNA4977.For 191 patients and 74 control subjects in the male group and 92 patients and 61 control subjects in the female group, there were no significant between-group differences in age, cholesterol level, body mass index, stroke severity, or 4977 deletion. After adjusting for confounding factors, there was no correlation between mtDNA4977 amount and infarction risk, recurrent stroke, or stroke severity. However, mtDNA4977 was undetected in 6.94% subjects, and these individuals had a higher prevalence of stroke than those with detectable mtDNA4977 (OR: 0.181, 95% CI 0.041-0.798, p = 0.024). Additionally, mtDNA4977 status had no effect on stroke prognosis, including stroke severity and recurrent stroke.In conclusion, there was no apparent association between mtDNA4977 deletion and cerebral infarction. Undetectable mtDNA4977 may be a marker or risk factor for ischemic stroke. |
Audience | Academic |
Author | Chen, Yi-Chun Lee, Yun-Shien Chang, Kuo-Hsuan Chen, Chiung-Mei Chen, Huei-Wen Huang, Yu-hua |
AuthorAffiliation | 2 College of Medicine, Chang-Gung University, Taoyuan, Taiwan 1 Department of Neurology, Chang Gung Memorial Hospital Linkou Medical Center, Taoyuan, Taiwan 4 Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan Fraunhofer Research Institution of Marine Biotechnology, GERMANY 3 Department of Biotechnology, Ming Chuan University, Taoyuan, Taiwan |
AuthorAffiliation_xml | – name: 1 Department of Neurology, Chang Gung Memorial Hospital Linkou Medical Center, Taoyuan, Taiwan – name: 3 Department of Biotechnology, Ming Chuan University, Taoyuan, Taiwan – name: 4 Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan – name: Fraunhofer Research Institution of Marine Biotechnology, GERMANY – name: 2 College of Medicine, Chang-Gung University, Taoyuan, Taiwan |
Author_xml | – sequence: 1 givenname: Yu-hua surname: Huang fullname: Huang, Yu-hua – sequence: 2 givenname: Chiung-Mei surname: Chen fullname: Chen, Chiung-Mei – sequence: 3 givenname: Yun-Shien surname: Lee fullname: Lee, Yun-Shien – sequence: 4 givenname: Kuo-Hsuan surname: Chang fullname: Chang, Kuo-Hsuan – sequence: 5 givenname: Huei-Wen surname: Chen fullname: Chen, Huei-Wen – sequence: 6 givenname: Yi-Chun orcidid: 0000-0002-2457-5023 surname: Chen fullname: Chen, Yi-Chun |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/29474453$$D View this record in MEDLINE/PubMed |
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CitedBy_id | crossref_primary_10_1097_MD_0000000000016302 crossref_primary_10_4081_oncol_2019_409 crossref_primary_10_1177_2047487319853064 crossref_primary_10_1111_jnc_15169 crossref_primary_10_1177_2047487319843388 crossref_primary_10_1186_s12964_024_01896_0 crossref_primary_10_38175_phnx_869878 |
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Snippet | Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic stroke is... Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA.sup.4977). The role of mtDNA.sup.4977 in... Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA.sup.4977). The role of mtDNA.sup.4977 in ischemic... Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA4977). The role of mtDNA4977 in ischemic... Background Coronary artery disease is associated with a common mitochondrial DNA alteration, a 4977 bp deletion (mtDNA 4977 ). The role of mtDNA 4977 in... |
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SubjectTerms | Biology and life sciences Body mass Body mass index Body size Brain research Breast cancer Cardiovascular disease Cerebral infarction Cholesterol Coronary artery Coronary artery disease Coronary vessels Deoxyribonucleic acid Development and progression DNA DNA sequencing Gene sequencing Genetic aspects Health risks Heart diseases Hospitals Infarction Ischemia Leukocytes Medical imaging Medical research Medicine Medicine and Health Sciences Mitochondria Mitochondrial DNA Mutagenesis Mutation Neurology Patients Physiological aspects Polymerase chain reaction Research and Analysis Methods Risk factors Stroke Studies White blood cells |
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Title | Detection of mitochondrial DNA with 4977 bp deletion in leukocytes of patients with ischemic stroke |
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