What an rRNA secondary structure tells about phylogeny of fungi in Ascomycota with emphasis on evolution of major types of ascus
RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. Ho...
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Published in | PloS one Vol. 7; no. 10; p. e47546 |
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Main Authors | , |
Format | Journal Article |
Language | English |
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26.10.2012
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Abstract | RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists.
We selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes.
Our results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. |
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AbstractList | BACKGROUNDRNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists. METHODOLOGY/PRINCIPAL FINDINGSWe selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes. CONCLUSIONSOur results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. Background RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists. Methodology/Principal Findings We selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes. Conclusions Our results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. BACKGROUND: RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists. METHODOLOGY/PRINCIPAL FINDINGS: We selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes. CONCLUSIONS: Our results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists. We selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes. Our results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function relationships. Nucleotide sequences from ribosomal RNA (rRNA) genes have made a great contribution to our understanding of Ascomycota phylogeny. However, filling the gaps between molecular phylogeny and morphological assumptions based on ascus dehiscence modes and type of fruitbodies at the higher level classification of the phylum remains an unfulfilled task faced by mycologists. We selected some major groups of Ascomycota to view their phylogenetic relationships based on analyses of rRNA secondary structure. Using rRNA secondary structural information, here, we converted nucleotide sequences into the structure ones over a 20-symbol code. Our structural analyses together with ancestral character state reconstruction produced reasonable phylogenetic position for the class Geoglossomycetes as opposed to the classic nucleotide analyses. Judging from the secondary structure analyses with consideration of mode of ascus dehiscence and the ability of forming fruitbodies, we draw a clear picture of a possible evolutionary route for fungal asci and some major groups of fungi in Ascomycota. The secondary structure trees show a more reasonable phylogenetic position for the class Geoglossomycetes. Our results illustrate that asci lacking of any dehiscence mechanism represent the most primitive type. Passing through the operculate and Orbilia-type asci, bitunicate asci occurred. The evolution came to the most advanced inoperculate type. The ascus-producing fungi might be derived from groups lacking of the capacity to form fruitbodies, and then evolved multiple times. The apothecial type of fruitbodies represents the ancestral state, and the ostiolar type is advanced. The class Geoglossomycetes is closely related to Leotiomycetes and Sordariomycetes having a similar ascus type other than it was originally placed based on nucleotide sequence analyses. |
Audience | Academic |
Author | Zhuang, Wen-Ying Liu, Chao-Yang |
AuthorAffiliation | 2 School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, People's Republic of China 1 State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, People's Republic of China Nanjing Agricultural University, China |
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Author_xml | – sequence: 1 givenname: Wen-Ying surname: Zhuang fullname: Zhuang, Wen-Ying email: zhuangwy@im.ac.cn organization: State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, People's Republic of China. zhuangwy@im.ac.cn – sequence: 2 givenname: Chao-Yang surname: Liu fullname: Liu, Chao-Yang |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/23110078$$D View this record in MEDLINE/PubMed |
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CitedBy_id | crossref_primary_10_1007_s13225_013_0269_y crossref_primary_10_1007_s13225_013_0263_4 crossref_primary_10_1371_journal_pgen_1003820 crossref_primary_10_1038_srep09448 crossref_primary_10_1007_s13225_013_0240_y crossref_primary_10_1371_journal_pone_0197025 |
Cites_doi | 10.1186/1471-2148-10-246 10.1093/bioinformatics/btl446 10.1007/978-3-662-10376-0_8 10.1080/10635150801910451 10.1093/sysbio/syp020 10.1006/mpev.1995.1028 10.1093/bioinformatics/btg180 10.2307/3792917 10.3767/003158509X461486 10.1093/molbev/msh029 10.1093/sysbio/syq010 10.1186/1471-2105-9-212 10.1038/nature05110 10.1139/b78-241 10.29173/bluejay5827 10.1073/pnas.0400938101 10.1093/nar/30.11.2575 10.1080/106351599260184 10.1016/j.ympev.2006.09.019 10.1186/1471-2148-10-352 10.1007/s002390010081 10.2307/3755666 10.1093/molbev/msi099 10.1017/S0024282978000079 10.1016/j.mycres.2007.03.004 10.1007/BF02102452 10.2307/3753859 10.1080/10635150490522232 10.1017/S0953756203008219 10.3852/mycologia.98.6.1018 10.1080/10635150490264699 10.2307/3754411 10.1016/j.ympev.2006.05.031 10.1079/9780851998268.0000 10.1016/j.mycres.2007.02.010 10.1093/oxfordjournals.molbev.a026285 10.1016/S1367-5931(00)00221-0 10.1093/oxfordjournals.molbev.a004221 10.1017/S0024282964000251 10.1016/S1055-7903(03)00061-7 |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Conceived and designed the experiments: WYZ. Performed the experiments: WYZ CYL. Analyzed the data: WYZ CYL. Contributed reagents/materials/analysis tools: WYZ CYL. Wrote the paper: WYZ CYL. Competing Interests: The authors have declared that no competing interests exist. |
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References | 12912839 - Bioinformatics. 2003 Aug 12;19(12):1572-4 12034847 - Nucleic Acids Res. 2002 Jun 1;30(11):2575-87 19915689 - Persoonia. 2009 Jun;22:129-38 17512180 - Mycol Res. 2007 May;111(Pt 5):592-8 17486977 - Mycologia. 2006 Nov-Dec;98(6):1018-28 21073690 - BMC Evol Biol. 2010;10:352 14660689 - Mol Biol Evol. 2004 Mar;21(3):419-27 14965900 - Syst Biol. 2004 Feb;53(1):47-67 15070748 - Proc Natl Acad Sci U S A. 2004 Mar 30;101(13):4507-12 16928733 - Bioinformatics. 2006 Nov 1;22(21):2688-90 11029064 - J Mol Evol. 2000 Sep;51(3):194-204 15689526 - Mol Biol Evol. 2005 Apr;22(4):1129-36 11470603 - Curr Opin Chem Biol. 2001 Aug;5(4):402-8 18439255 - BMC Bioinformatics. 2008;9:212 15545248 - Syst Biol. 2004 Oct;53(5):673-84 12878461 - Mol Phylogenet Evol. 2003 Aug;28(2):241-52 14563128 - Mycol Res. 2003 Sep;107(Pt 9):1021-31 20525638 - Syst Biol. 2010 May;59(3):307-21 12200486 - Mol Biol Evol. 2002 Sep;19(9):1591-601 17101282 - Mol Phylogenet Evol. 2007 Jun;43(3):881-90 11110900 - Mol Biol Evol. 2000 Dec;17(12):1842-53 16837216 - Mol Phylogenet Evol. 2006 Nov;41(2):295-312 20525580 - Syst Biol. 2009 Apr;58(2):224-39 8845967 - Mol Phylogenet Evol. 1995 Sep;4(3):314-30 18300027 - Syst Biol. 2008 Feb;57(1):141-56 2107323 - J Mol Evol. 1990 Jan;30(1):43-59 17572334 - Mycol Res. 2007 May;111(Pt 5):509-47 17051209 - Nature. 2006 Oct 19;443(7113):818-22 20701742 - BMC Evol Biol. 2010;10:246 ref12 ref59 ref14 OE Eriksson (ref28) 1997; 1 OE Eriksson (ref29) 2003; 9 PRE Mittl (ref3) 2001; 5 G Caetano-Anollés (ref4) 2002; 30 ref18 B Schäferhoff (ref55) 2010; 10 CL Schoch (ref32) 2009; 58 F Ronquist (ref51) 2003; 19 C Hudelot (ref8) 2003; 28 DHS Richardson (ref38) 1964; 2 ref50 S Landvik (ref23) 2003; 107 M Pagel (ref57) 1999; 48 LJ Collins (ref2) 2000; 51 ET Butler (ref40) 1939; 31 ref46 S Landvik (ref27) 1993; 11 ref47 ref42 ref41 ME Barr (ref17) 1983; 75 ref43 SA Subbotin (ref11) 2007; 43 OE Eriksson (ref45) 1998; 16 S Schäffer (ref54) 2010; 10 GS De Hoog (ref24) 2005; 51 NB Mugridge (ref6) 2000; 17 MJ Telford (ref9) 2005; 22 JA Nannfeldt (ref16) 1932; 8 H Jow (ref7) 2002; 19 Z Wang (ref35) 2006; 41 FL Tai (ref15) 1931; 1 AD Smith (ref10) 2004; 21 M Pagel (ref58) 2004; 53 ref33 ref39 S Guindon (ref49) 2010; 59 S Ekman (ref56) 2008; 57 JW Spatafora (ref30) 2006; 98 JAA Nylander (ref52) 2004; 53 DS Hibbett (ref31) 2007; 111 ES Luttrell (ref37) 1955; 47 ref26 ref22 E Boudier (ref13) 1885; 1 ref21 YJ Liu (ref44) 2004; 101 KM Kjer (ref5) 1995; 13 CL Schoch (ref34) 2009; 22 A Stamatakis (ref53) 2006; 22 MS Johnson (ref1) 1990; 30 K Katoh (ref48) 2008; 9 GL Benny (ref19) 1978; 56 PV Hansen (ref25) 2007; 111 TY James (ref36) 2006; 443 R Honegger (ref20) 1978; 10 |
References_xml | – volume: 10 start-page: 246 year: 2010 ident: ref54 article-title: Ancestral state reconstruction reveals multiple independent evolution of diagnostic morphological characters in the “Higher Oribatida” (Acari), conflicting with current classification schemes publication-title: BMC Evol Biol doi: 10.1186/1471-2148-10-246 contributor: fullname: S Schäffer – volume: 22 start-page: 2688 year: 2006 ident: ref53 article-title: RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models publication-title: Bioinformatics doi: 10.1093/bioinformatics/btl446 contributor: fullname: A Stamatakis – ident: ref39 doi: 10.1007/978-3-662-10376-0_8 – volume: 57 start-page: 141 year: 2008 ident: ref56 article-title: The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (lichenized Ascomycota) publication-title: Syst Biol doi: 10.1080/10635150801910451 contributor: fullname: S Ekman – ident: ref43 – volume: 58 start-page: 224 year: 2009 ident: ref32 article-title: The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits publication-title: Syst Biol doi: 10.1093/sysbio/syp020 contributor: fullname: CL Schoch – volume: 13 start-page: 314 year: 1995 ident: ref5 article-title: Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: an example of alignment and data presentation from the frogs publication-title: Mol Phylogenet Evol doi: 10.1006/mpev.1995.1028 contributor: fullname: KM Kjer – volume: 19 start-page: 1572 year: 2003 ident: ref51 article-title: MrBayes 3: Bayesian phylogenetic inference under mixed models publication-title: Bioinformatics doi: 10.1093/bioinformatics/btg180 contributor: fullname: F Ronquist – volume: 75 start-page: 1 year: 1983 ident: ref17 article-title: The ascomycete connection publication-title: Mycologia doi: 10.2307/3792917 contributor: fullname: ME Barr – volume: 22 start-page: 129 year: 2009 ident: ref34 article-title: Geoglossomycetes cl. nov., Geogolssales ord. nov. and taxa above class rank in the Ascomycota Tree of Life publication-title: Persoonia doi: 10.3767/003158509X461486 contributor: fullname: CL Schoch – volume: 21 start-page: 419 year: 2004 ident: ref10 article-title: Empirical models for substitution in ribosomal RNA publication-title: Mol Biol Evol doi: 10.1093/molbev/msh029 contributor: fullname: AD Smith – volume: 59 start-page: 307 year: 2010 ident: ref49 article-title: New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0 publication-title: Syst Biol doi: 10.1093/sysbio/syq010 contributor: fullname: S Guindon – volume: 1 start-page: 91 year: 1885 ident: ref13 article-title: Nouvelle classification naturelle des Discomycetes charnus publication-title: Bull Soc Mycol France contributor: fullname: E Boudier – volume: 9 start-page: 212 year: 2008 ident: ref48 article-title: Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework publication-title: BMC Bioinform doi: 10.1186/1471-2105-9-212 contributor: fullname: K Katoh – volume: 443 start-page: 818 issue: 7113 year: 2006 ident: ref36 article-title: Reconstructing the early evolution of Fungi using a six-gene phylogeny publication-title: Nature doi: 10.1038/nature05110 contributor: fullname: TY James – volume: 56 start-page: 2006 year: 1978 ident: ref19 article-title: Ultrastructural studies on Orbilia luteorubella (Discomycetes) publication-title: Can J Bot doi: 10.1139/b78-241 contributor: fullname: GL Benny – ident: ref22 doi: 10.29173/bluejay5827 – ident: ref50 – ident: ref26 – volume: 101 start-page: 4507 year: 2004 ident: ref44 article-title: Body plan evolution of ascomycetes, as inferred from an RNA polymerase II phylogeny publication-title: Proc Nat Acad Sci USA doi: 10.1073/pnas.0400938101 contributor: fullname: YJ Liu – volume: 1 start-page: 147 year: 1931 ident: ref15 article-title: Observations on the development of Myriangium bambusae Rick publication-title: Sinensia contributor: fullname: FL Tai – ident: ref47 – volume: 30 start-page: 2575 year: 2002 ident: ref4 article-title: Tracing the evolution of RNA structure in ribosomes publication-title: Nucleic Acids Res doi: 10.1093/nar/30.11.2575 contributor: fullname: G Caetano-Anollés – volume: 48 start-page: 612 year: 1999 ident: ref57 article-title: The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies publication-title: Syst Biol doi: 10.1080/106351599260184 contributor: fullname: M Pagel – volume: 43 start-page: 881 year: 2007 ident: ref11 article-title: Application of the secondary structure model of rRNA for phylogeny: D2–D3 expansion segments of the LSU gene of plant-parasitic nematodes from the family Hoplolaimidae Filipjev, 1934 publication-title: Mol Phylogenet Evol doi: 10.1016/j.ympev.2006.09.019 contributor: fullname: SA Subbotin – ident: ref33 – volume: 10 start-page: 352 year: 2010 ident: ref55 article-title: Towards resolving Lamiales relationships: insight from rapidly evolving chloroplast sequences publication-title: BMC Evol Biol doi: 10.1186/1471-2148-10-352 contributor: fullname: B Schäferhoff – volume: 51 start-page: 194 year: 2000 ident: ref2 article-title: Use of RNA secondary structure for studying the evolution of RNase P and RNase MRP publication-title: J Mol Evol doi: 10.1007/s002390010081 contributor: fullname: LJ Collins – volume: 47 start-page: 511 year: 1955 ident: ref37 article-title: The ascostromatic Ascomycetes publication-title: Mycologia doi: 10.2307/3755666 contributor: fullname: ES Luttrell – volume: 22 start-page: 1129 year: 2005 ident: ref9 article-title: Consideration of RNA secondary structure significantly improves likelihood-based estimates of phylogeny: examples from the Bilateria publication-title: Mol Biol Evol doi: 10.1093/molbev/msi099 contributor: fullname: MJ Telford – volume: 10 start-page: 47 year: 1978 ident: ref20 article-title: The ascus apex in lichenized fungi I. The Lecanora-, Peltigera- and Teloschistes-types publication-title: Lichenologist doi: 10.1017/S0024282978000079 contributor: fullname: R Honegger – volume: 111 start-page: 509 year: 2007 ident: ref31 article-title: A higher-level phylogenetic classification of the Fungi publication-title: Mycol Res doi: 10.1016/j.mycres.2007.03.004 contributor: fullname: DS Hibbett – ident: ref41 – volume: 30 start-page: 43 year: 1990 ident: ref1 article-title: Molecular anatomy: phyletic relationships derived from three-dimensional structures of proteins publication-title: J Mol Evol doi: 10.1007/BF02102452 contributor: fullname: MS Johnson – ident: ref14 doi: 10.2307/3753859 – volume: 9 start-page: 91 year: 2003 ident: ref29 article-title: Notes on ascomycete systematics. Nos 3580-3623 publication-title: Myconet contributor: fullname: OE Eriksson – volume: 53 start-page: 673 year: 2004 ident: ref58 article-title: Bayesian estimation of ancestral states on phylogenies publication-title: Syst Biol doi: 10.1080/10635150490522232 contributor: fullname: M Pagel – volume: 11 start-page: 107 year: 1993 ident: ref27 article-title: Relationships of the genus Neolecta (Neolectales ordo nov., Ascomycotina) inferred from 18S rDNA sequences publication-title: Syst Ascomyc contributor: fullname: S Landvik – volume: 107 start-page: 1021 year: 2003 ident: ref23 article-title: Morphology and ultrastructure of Neolecta species publication-title: Mycol Res doi: 10.1017/S0953756203008219 contributor: fullname: S Landvik – volume: 98 start-page: 1018 year: 2006 ident: ref30 article-title: A five-gene phylogeny of Pezizomycotina publication-title: Mycologia doi: 10.3852/mycologia.98.6.1018 contributor: fullname: JW Spatafora – ident: ref59 – volume: 53 start-page: 47 year: 2004 ident: ref52 article-title: Bayesian phylogenetic analysis of combined data publication-title: Syst Biol doi: 10.1080/10635150490264699 contributor: fullname: JAA Nylander – volume: 1 start-page: 1 year: 1997 ident: ref28 article-title: Supraordinal taxa of Ascomycota publication-title: Myconet contributor: fullname: OE Eriksson – volume: 31 start-page: 612 year: 1939 ident: ref40 article-title: Ascus dehiscence in Lecanidion atratum and its significance publication-title: Mycologia doi: 10.2307/3754411 contributor: fullname: ET Butler – volume: 51 start-page: 33 year: 2005 ident: ref24 article-title: Evolution, taxonomy and ecology of the genus Thelebolus in Antarctica publication-title: Stud Mycol contributor: fullname: GS De Hoog – volume: 41 start-page: 295 year: 2006 ident: ref35 article-title: Evolution of helotialean fungi (Leotiomycetes, Pezizomycotina): a nuclear rDNA phylogeny publication-title: Mol Phylogenet Evol doi: 10.1016/j.ympev.2006.05.031 contributor: fullname: Z Wang – ident: ref12 doi: 10.1079/9780851998268.0000 – ident: ref46 – ident: ref42 – ident: ref21 – volume: 8 start-page: 1 issue: 2 year: 1932 ident: ref16 article-title: Studien uber die Morphologie und Systematik der nicht-lichenisierten inoperculaten Discomycetin publication-title: Nova Acta Regiae Soc Sci Upsal, Ser 4 contributor: fullname: JA Nannfeldt – volume: 111 start-page: 592 year: 2007 ident: ref25 article-title: Anatomy and cytology of Taphrina entomospora during infection of Nothofagus publication-title: Mycol Res doi: 10.1016/j.mycres.2007.02.010 contributor: fullname: PV Hansen – volume: 17 start-page: 1842 year: 2000 ident: ref6 article-title: Effects of sequence alignment and structural domains of ribosomal DNA on phylogeny reconstruction for the protozoan family Sarcocystidae publication-title: Mol Biol Evol doi: 10.1093/oxfordjournals.molbev.a026285 contributor: fullname: NB Mugridge – ident: ref18 – volume: 5 start-page: 402 year: 2001 ident: ref3 article-title: Structural genomics: opportunities and challenges publication-title: Curr Opin Chem Biol doi: 10.1016/S1367-5931(00)00221-0 contributor: fullname: PRE Mittl – volume: 19 start-page: 1591 year: 2002 ident: ref7 article-title: Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution publication-title: Mol Biol Evol doi: 10.1093/oxfordjournals.molbev.a004221 contributor: fullname: H Jow – volume: 16 start-page: 83 year: 1998 ident: ref45 article-title: Outline of the Ascomycetes – 1998 publication-title: Syst Ascomyc contributor: fullname: OE Eriksson – volume: 2 start-page: 205 year: 1964 ident: ref38 article-title: Studies on lichen asci. I. The bitunicate type publication-title: Lichenologist doi: 10.1017/S0024282964000251 contributor: fullname: DHS Richardson – volume: 28 start-page: 241 year: 2003 ident: ref8 article-title: RNA-based phylogenetic methods: application to mammalian mitochondrial RNA sequences publication-title: Mol Phylogenet Evol doi: 10.1016/S1055-7903(03)00061-7 contributor: fullname: C Hudelot |
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Snippet | RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important structure-function... Background RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important... BACKGROUNDRNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important... BACKGROUND: RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important... Background RNA secondary structure is highly conserved throughout evolution. The higher order structure is fundamental in establishing important... |
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SubjectTerms | Asci Ascomycota Ascomycota - classification Ascomycota - genetics Bioinformatics Biological Evolution Biology Dehiscence Evolution Fungi Gene sequencing Lecanora Morphology Neolectomycetes Nucleic Acid Conformation Nucleotide sequence Orbilia Orbiliomycetes Phylogenetics Phylogeny Physics Protein structure Ribonucleic acid Ribosomal RNA RNA RNA polymerase RNA, Ribosomal - genetics rRNA Saccharomyces Saccharomycetes Schizosaccharomycetes Secondary structure Structure-function relationships Taphrinomycetes Taxonomy |
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Title | What an rRNA secondary structure tells about phylogeny of fungi in Ascomycota with emphasis on evolution of major types of ascus |
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