The assessment of fundus image quality labeling reliability among graders with different backgrounds

For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Color fundus photographs were labeled using a Python-based...

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Published inPloS one Vol. 17; no. 7; p. e0271156
Main Authors Laurik-Feuerstein, Kornélia Lenke, Sapahia, Rishav, Cabrera DeBuc, Delia, Somfai, Gábor Márk
Format Journal Article
LanguageEnglish
Published United States Public Library of Science 26.07.2022
Public Library of Science (PLoS)
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Abstract For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis. The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively. Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
AbstractList For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis. The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively. Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
PurposeFor the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality.MethodsColor fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis.ResultsThe median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively.ConclusionImage grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality.PURPOSEFor the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality.Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis.METHODSColor fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis.The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively.RESULTSThe median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively.Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.CONCLUSIONImage grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
Purpose For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Methods Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis. Results The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively. Conclusion Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis. The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen's weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively. Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
Purpose For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of graders with different backgrounds in the labeling of retinal fundus image quality. Methods Color fundus photographs were labeled using a Python-based tool using four image categories: excellent (E), good (G), adequate (A) and insufficient for grading (I). We enrolled 8 subjects (4 with and 4 without medical background, groups M and NM, respectively) to whom a tutorial was presented on image quality requirements. We randomly selected 200 images from a pool of 18,145 expert-labeled images (50/E, 50/G, 50/A, 50/I). The performance of the grading was timed and the agreement was assessed. An additional grading round was performed with 14 labels for a more objective analysis. Results The median time (interquartile range) for the labeling task with 4 categories was 987.8 sec (418.6) for all graders and 872.9 sec (621.0) vs. 1019.8 sec (479.5) in the M vs. NM groups, respectively. Cohen’s weighted kappa showed moderate agreement (0.564) when using four categories that increased to substantial (0.637) when using only three by merging the E and G groups. By the use of 14 labels, the weighted kappa values were 0.594 and 0.667 when assigning four or three categories, respectively. Conclusion Image grading with a Python-based tool seems to be a simple yet possibly efficient solution for the labeling of fundus images according to image quality that does not necessarily require medical background. Such grading can be subject to variability but could still effectively serve the robust identification of images with insufficient quality. This emphasizes the opportunity for the democratization of ML-applications among persons with both medical and non-medical background. However, simplicity of the grading system is key to successful categorization.
Audience Academic
Author Cabrera DeBuc, Delia
Laurik-Feuerstein, Kornélia Lenke
Sapahia, Rishav
Somfai, Gábor Márk
AuthorAffiliation 3 Department of Ophthalmology, Stadtspital Zürich, Zurich, Switzerland
5 Department of Ophthalmology, Semmelweis University, Budapest, Hungary
1 Department of Ophthalmology, Klinikum Ernst von Bergmann, Potsdam, Germany
4 Spross Research Institute, Zurich, Switzerland
2 Miller School of Medicine, Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States of America
University of Warmia, POLAND
AuthorAffiliation_xml – name: University of Warmia, POLAND
– name: 3 Department of Ophthalmology, Stadtspital Zürich, Zurich, Switzerland
– name: 2 Miller School of Medicine, Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States of America
– name: 1 Department of Ophthalmology, Klinikum Ernst von Bergmann, Potsdam, Germany
– name: 5 Department of Ophthalmology, Semmelweis University, Budapest, Hungary
– name: 4 Spross Research Institute, Zurich, Switzerland
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  givenname: Kornélia Lenke
  surname: Laurik-Feuerstein
  fullname: Laurik-Feuerstein, Kornélia Lenke
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/35881576$$D View this record in MEDLINE/PubMed
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Competing Interests: The authors have declared that no competing interests exist.
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Snippet For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the performance of...
Purpose For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the...
PurposeFor the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the...
Purpose For the training of machine learning (ML) algorithms, correctly labeled ground truth data are inevitable. In this pilot study, we assessed the...
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SubjectTerms Algorithms
Artificial intelligence
Automation
Biology and Life Sciences
Categories
Color
Color vision
Computer and Information Sciences
Datasets
Diabetes
Diabetic retinopathy
Diagnostic Techniques, Ophthalmological
Engineering and Technology
Fundus Oculi
Humans
Image processing
Image quality
Labeling
Labelling
Labels
Machine learning
Medicine and Health Sciences
Objective analysis
Ophthalmology
Performance assessment
Photography - methods
Pilot Projects
Reliability analysis
Reproducibility of Results
Research and Analysis Methods
Retina
User interface
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Title The assessment of fundus image quality labeling reliability among graders with different backgrounds
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