Assessment of Overlap of Phylogenetic Transmission Clusters and Communities in Simple Sexual Contact Networks: Applications to HIV-1 - Villandre, Luc; Stephens, David A.; Labbe, Aurelie; Günthard, Huldrych F.; Kouyos, Roger; Stadler, Tanja (PloS one, 2016)
Keywords: Acquired immune deficiency syndrome; Adult; AIDS; Algorithms; Bioinformatics; Biology and Life Sciences; Care and treatment; Cluster Analysis; Clusters; Communities; Community Networks - statistics & numerical data; Computer and Information Sciences; Computer Simulation; Development and progression; Disease transmission; Epidemics; Epidemics - prevention & control; Epidemiology; Genotype; Graphs; Health aspects; HIV; HIV Infections - epidemiology; HIV Infections - psychology; HIV Infections - transmission; HIV Infections - virology; HIV-1 - classification; HIV-1 - genetics; Homosexuality, Male; Hospitals; Human immunodeficiency virus; Humans; Incidence; Infections; Infectious diseases; Islands; Male; Medicine and health sciences; Middle Aged; Models, Statistical; Networks; Occupational health; Phylogenetics; Phylogeny; Research and Analysis Methods; Residence Characteristics - statistics & numerical data; Risk factors; Sexual Partners; Sexually transmitted diseases; STD; Switzerland - epidemiology; Virology; Switzerland; United States