Interspecies transmission and emergence of novel viruses: lessons from bats and birds

•Bats and birds are reservoirs of zoonotic viruses.•Their unique immune systems allow them to harbor a large variety of viruses.•Coronaviruses and influenza viruses are examples of interspecies transmission of viruses. As exemplified by coronaviruses and influenza viruses, bats and birds are natural...

Full description

Saved in:
Bibliographic Details
Published inTrends in microbiology (Regular ed.) Vol. 21; no. 10; pp. 544 - 555
Main Authors Chan, Jasper Fuk-Woo, To, Kelvin Kai-Wang, Tse, Herman, Jin, Dong-Yan, Yuen, Kwok-Yung
Format Journal Article
LanguageEnglish
Published England Elsevier Ltd 01.10.2013
Subjects
Online AccessGet full text

Cover

Loading…
Abstract •Bats and birds are reservoirs of zoonotic viruses.•Their unique immune systems allow them to harbor a large variety of viruses.•Coronaviruses and influenza viruses are examples of interspecies transmission of viruses. As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.
AbstractList •Bats and birds are reservoirs of zoonotic viruses.•Their unique immune systems allow them to harbor a large variety of viruses.•Coronaviruses and influenza viruses are examples of interspecies transmission of viruses. As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.
• Bats and birds are reservoirs of zoonotic viruses. • Their unique immune systems allow them to harbor a large variety of viruses. • Coronaviruses and influenza viruses are examples of interspecies transmission of viruses. As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.
As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.
Highlights • Bats and birds are reservoirs of zoonotic viruses. • Their unique immune systems allow them to harbor a large variety of viruses. • Coronaviruses and influenza viruses are examples of interspecies transmission of viruses.
As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species and viruses for interspecies transmission. These warm-blooded vertebrates display high species biodiversity, roosting and migratory behavior, and a unique adaptive immune system, which are favorable characteristics for asymptomatic shedding, dissemination, and mixing of different viruses for the generation of novel mutant, recombinant, or reassortant RNA viruses. The increased intrusion of humans into wildlife habitats and overcrowding of different wildlife species in wet markets and farms have also facilitated the interspecies transmission between different animal species.
Author Jin, Dong-Yan
To, Kelvin Kai-Wang
Tse, Herman
Chan, Jasper Fuk-Woo
Yuen, Kwok-Yung
AuthorAffiliation 3 Research Centre of Infection and Immunology, University of Hong Kong, Hong Kong Special Administrative Region, China
2 Carol Yu Centre for Infection, University of Hong Kong, Hong Kong Special Administrative Region, China
1 State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
4 Department of Microbiology, University of Hong Kong, Hong Kong Special Administrative Region, China
5 Department of Biochemistry, University of Hong Kong, Hong Kong Special Administrative Region, China
AuthorAffiliation_xml – name: 2 Carol Yu Centre for Infection, University of Hong Kong, Hong Kong Special Administrative Region, China
– name: 3 Research Centre of Infection and Immunology, University of Hong Kong, Hong Kong Special Administrative Region, China
– name: 5 Department of Biochemistry, University of Hong Kong, Hong Kong Special Administrative Region, China
– name: 4 Department of Microbiology, University of Hong Kong, Hong Kong Special Administrative Region, China
– name: 1 State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
Author_xml – sequence: 1
  givenname: Jasper Fuk-Woo
  surname: Chan
  fullname: Chan, Jasper Fuk-Woo
  organization: State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
– sequence: 2
  givenname: Kelvin Kai-Wang
  surname: To
  fullname: To, Kelvin Kai-Wang
  organization: State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
– sequence: 3
  givenname: Herman
  surname: Tse
  fullname: Tse, Herman
  organization: State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
– sequence: 4
  givenname: Dong-Yan
  surname: Jin
  fullname: Jin, Dong-Yan
  organization: Department of Biochemistry, University of Hong Kong, Hong Kong Special Administrative Region, China
– sequence: 5
  givenname: Kwok-Yung
  surname: Yuen
  fullname: Yuen, Kwok-Yung
  email: kyyuen@hkucc.hku.hk
  organization: State Key Laboratory of Emerging Infectious Diseases, University of Hong Kong, Hong Kong Special Administrative Region, China
BackLink https://www.ncbi.nlm.nih.gov/pubmed/23770275$$D View this record in MEDLINE/PubMed
BookMark eNqFUk1vEzEUtFARTQs_gAvskUuCn70fNkiVqoqPSpU4lEjcLMf7Njjs2sFvE6n_Hi8pFVSiPfngmXlv3swJOwoxIGMvgS-AQ_12sxj9sBAc5IJXC86rJ2wGqlHzUip-xGZc1_VcleLbMTsh2vCMqET1jB0L2TRcNNWMLS_DiIm26DxSMSYbaPBEPobChrbAAdMag8MidkWIe-yLvU87QnpX9EgUAxVdikOxsiP9Zqx8auk5e9rZnvDF7XvKlh8_fL34PL_68uny4vxq7upGj_POTjY617WyrFagJK5KwVHzEpQW0DgBNYLUFlRbSyld1SJ3mjurAHRl5Sk7O-hud6sBW4chO-jNNvnBphsTrTf__gT_3azj3jQg6lJDFnhzK5Dizx3SaLJ7h31vA8YdGVBc5h2lrh-HlqUsOahSZ-irv9e62-fP2TMADgCXIlHC7g4C3Ew3MRuTozVTtIZXJgeXOc09jvOjHXNS2ZnvH2S-PjA7G41dJ09meZ0BNecg8iGmhd8fEJjD2ntMhnIfcuytT-hG00b_oP7ZPbbrffDO9j_wBmkTdynkFhgwJAw311Mtp1aCzI1Uehqv_y_wyPBf_8nvoQ
CitedBy_id crossref_primary_10_1007_s10311_021_01229_4
crossref_primary_10_1097_MCP_0000000000000055
crossref_primary_10_1016_j_ebiom_2021_103643
crossref_primary_10_1016_j_ijantimicag_2020_105948
crossref_primary_10_1016_j_cell_2021_06_008
crossref_primary_10_1016_j_tvjl_2018_07_005
crossref_primary_10_3389_fmicb_2021_675419
crossref_primary_10_1017_sus_2022_18
crossref_primary_10_3390_molecules25184086
crossref_primary_10_1128_JVI_00692_18
crossref_primary_10_1177_11786302221107786
crossref_primary_10_1016_j_scitotenv_2020_139278
crossref_primary_10_1080_22221751_2024_2400559
crossref_primary_10_1097_MD_0000000000025832
crossref_primary_10_1093_conphys_coad102
crossref_primary_10_1016_j_comtox_2021_100161
crossref_primary_10_24018_ejbiomed_2023_2_4_80
crossref_primary_10_1097_MCP_0000000000000047
crossref_primary_10_1186_s12929_019_0567_0
crossref_primary_10_1093_molbev_msu329
crossref_primary_10_1038_s41586_021_03431_4
crossref_primary_10_3389_fmicb_2018_00702
crossref_primary_10_3389_fphar_2020_592169
crossref_primary_10_1038_ncomms4067
crossref_primary_10_47102_annals_acadmed_sg_202046
crossref_primary_10_1016_j_rvsc_2021_02_009
crossref_primary_10_1016_j_ejmech_2023_115113
crossref_primary_10_3390_ijms25042428
crossref_primary_10_1016_j_coviro_2015_02_001
crossref_primary_10_1111_1744_9987_13723
crossref_primary_10_3389_fvets_2021_719834
crossref_primary_10_1097_COH_0000000000000650
crossref_primary_10_1111_tbed_13916
crossref_primary_10_36990_hijp_vi_191
crossref_primary_10_1183_09031936_00006414
crossref_primary_10_1007_s00265_020_02932_y
crossref_primary_10_1016_j_meegid_2021_104883
crossref_primary_10_1186_s40779_021_00342_3
crossref_primary_10_1080_13543776_2021_1880568
crossref_primary_10_2174_0929866529666220316145149
crossref_primary_10_1097_MRM_0000000000000335
crossref_primary_10_1016_j_csbj_2022_09_028
crossref_primary_10_1016_j_virusres_2014_11_019
crossref_primary_10_2174_1573398X16999201203162129
crossref_primary_10_1016_j_coviro_2018_07_017
crossref_primary_10_12688_f1000research_54738_1
crossref_primary_10_1016_j_scib_2018_08_002
crossref_primary_10_1088_1755_1315_584_1_012004
crossref_primary_10_1089_vbz_2017_2138
crossref_primary_10_12688_f1000research_54738_2
crossref_primary_10_12688_f1000research_54738_3
crossref_primary_10_1016_j_scitotenv_2020_141483
crossref_primary_10_3390_molecules26216455
crossref_primary_10_1007_s40142_020_00197_5
crossref_primary_10_1016_j_glt_2020_09_003
crossref_primary_10_5937_afmnai38_30190
crossref_primary_10_1038_s41598_018_24620_8
crossref_primary_10_3390_pathogens12040610
crossref_primary_10_4103_jmms_jmms_114_20
crossref_primary_10_1016_j_prevetmed_2015_08_006
crossref_primary_10_2217_fvl_2017_0151
crossref_primary_10_3390_v13050792
crossref_primary_10_1128_JVI_01133_16
crossref_primary_10_52711_0974_360X_2022_00849
crossref_primary_10_1038_s41598_020_69557_z
crossref_primary_10_1155_2021_9495126
crossref_primary_10_1007_s42247_020_00136_8
crossref_primary_10_1007_s00431_020_03866_3
crossref_primary_10_1038_s41467_022_30698_6
crossref_primary_10_1128_JVI_03649_13
crossref_primary_10_1016_j_jtcvs_2020_05_083
crossref_primary_10_1128_JCM_00517_16
crossref_primary_10_1016_j_arabjc_2021_103315
crossref_primary_10_1016_j_genrep_2020_100765
crossref_primary_10_1111_apt_15779
crossref_primary_10_3201_eid2602_190346
crossref_primary_10_2174_1389557520666201117111259
crossref_primary_10_1093_infdis_jit504
crossref_primary_10_3390_jcm14051555
crossref_primary_10_5005_japi_11001_0140
crossref_primary_10_1016_j_intimp_2020_107245
crossref_primary_10_1128_microbiolspec_PFS_0007_2014
crossref_primary_10_1038_s41598_025_93477_5
crossref_primary_10_1186_s12967_024_05587_9
crossref_primary_10_20965_jdr_2022_p0065
crossref_primary_10_1002_mco2_26
crossref_primary_10_1016_j_bios_2020_112777
crossref_primary_10_1016_j_bj_2020_04_007
crossref_primary_10_53879_id_60_05_13515
crossref_primary_10_1016_S2666_5247_21_00219_6
crossref_primary_10_2147_IJGM_S419789
crossref_primary_10_1007_s12038_020_00131_5
crossref_primary_10_1073_pnas_2113628119
crossref_primary_10_36377_1683_2981_2020_18_2_4_9
crossref_primary_10_1371_journal_pone_0150198
crossref_primary_10_24125_sanamed_v16i1_481
crossref_primary_10_1038_srep17155
crossref_primary_10_2174_1566524021666210803154250
crossref_primary_10_1111_zph_12290
crossref_primary_10_1099_acmi_0_000544_v5
crossref_primary_10_3390_nano11040900
crossref_primary_10_1016_j_bioorg_2024_107894
crossref_primary_10_1186_s43168_021_00053_2
crossref_primary_10_1590_1519_6984_247604
crossref_primary_10_1128_genomeA_00795_17
crossref_primary_10_3390_jcm9082442
crossref_primary_10_54393_pbmj_v5i1_202
crossref_primary_10_4103_jisppd_jisppd_478_20
crossref_primary_10_1142_S1682648515500171
crossref_primary_10_1093_cid_ciac171
crossref_primary_10_1080_07391102_2021_1921032
crossref_primary_10_3390_ijms21072574
crossref_primary_10_1051_bioconf_202412402007
crossref_primary_10_1007_s10668_021_01719_z
crossref_primary_10_1186_s12873_021_00463_x
crossref_primary_10_3389_fmicb_2022_884034
crossref_primary_10_1016_j_prevetmed_2019_02_017
crossref_primary_10_3390_zoonoticdis4020014
crossref_primary_10_1007_s00705_022_05459_x
crossref_primary_10_22207_JPAM_17_3_43
crossref_primary_10_1007_s10344_019_1252_z
crossref_primary_10_3389_fpubh_2014_00153
crossref_primary_10_1007_s12250_015_3711_3
crossref_primary_10_1016_j_bioorg_2023_106882
crossref_primary_10_1002_jmv_28116
crossref_primary_10_1007_s10557_020_07073_y
crossref_primary_10_1111_mec_13310
crossref_primary_10_1016_j_ympev_2019_106618
crossref_primary_10_1002_bab_2597
crossref_primary_10_1039_C5AN00407A
crossref_primary_10_14202_vetworld_2019_1797_1805
crossref_primary_10_1007_s10875_021_01061_z
crossref_primary_10_1016_j_sjbs_2020_11_077
crossref_primary_10_31829_2641_7456_ahs2020_4_1__126
crossref_primary_10_1128_JCM_01224_15
crossref_primary_10_1099_vir_0_000158
crossref_primary_10_1007_s11239_020_02210_8
crossref_primary_10_1016_j_vetmic_2024_110136
crossref_primary_10_3390_vaccines10050755
crossref_primary_10_2174_2666796701999200921094439
crossref_primary_10_2174_2666796703666220302143102
crossref_primary_10_1007_s11684_016_0430_6
crossref_primary_10_1016_j_envres_2020_110405
crossref_primary_10_3390_microbiolres12010016
crossref_primary_10_1080_17460441_2022_2153828
crossref_primary_10_1128_spectrum_02449_22
crossref_primary_10_3389_fvets_2020_539925
crossref_primary_10_3748_wjg_v26_i46_7272
crossref_primary_10_3389_fmicb_2022_845546
crossref_primary_10_1093_mtomcs_mfad001
crossref_primary_10_3390_microorganisms9051035
crossref_primary_10_54393_pbmj_v5i2_202
crossref_primary_10_1590_1519_6984_247237
crossref_primary_10_37881_1_616
crossref_primary_10_1111_tbed_14029
crossref_primary_10_1016_j_sjbs_2021_12_020
crossref_primary_10_22517_25395203_24928
crossref_primary_10_1186_s40249_017_0304_4
crossref_primary_10_3390_ijms21249775
crossref_primary_10_1093_cid_cit541
crossref_primary_10_1097_HM9_0000000000000068
crossref_primary_10_1007_s43393_022_00091_x
crossref_primary_10_36953_ECJ_2020_211215
crossref_primary_10_3389_fphar_2020_01258
crossref_primary_10_1016_j_ejps_2020_105522
crossref_primary_10_1007_s10530_023_03213_1
crossref_primary_10_3390_insects13090776
crossref_primary_10_3390_v11010073
crossref_primary_10_1177_0300060520943802
crossref_primary_10_3390_microorganisms8101468
crossref_primary_10_1016_j_tifs_2020_08_020
crossref_primary_10_1016_S1473_3099_13_70167_1
crossref_primary_10_1016_j_jinf_2013_12_014
crossref_primary_10_1002_jmv_28048
crossref_primary_10_1080_22221751_2022_2040922
crossref_primary_10_1016_j_mehy_2020_110121
crossref_primary_10_3389_fviro_2022_875213
crossref_primary_10_33204_mucosa_706906
crossref_primary_10_1038_s41467_021_21968_w
crossref_primary_10_1016_j_cej_2020_127522
crossref_primary_10_12688_f1000research_24927_1
crossref_primary_10_1007_s12275_017_7026_y
crossref_primary_10_1166_jbn_2021_3059
crossref_primary_10_2147_PHMT_S266063
crossref_primary_10_1002_pan3_10625
crossref_primary_10_1016_S2542_5196_21_00258_8
crossref_primary_10_1038_s41588_021_00805_2
crossref_primary_10_1097_MRM_0000000000000248
crossref_primary_10_1016_j_jinf_2016_02_011
crossref_primary_10_1002_adma_202310306
crossref_primary_10_1016_j_dsx_2020_04_011
crossref_primary_10_1016_j_phrs_2020_104960
crossref_primary_10_1016_j_envres_2020_109460
crossref_primary_10_2174_2666796701999201014160857
crossref_primary_10_1016_j_hermed_2021_100501
crossref_primary_10_1016_j_bpj_2021_03_024
crossref_primary_10_1038_s41467_024_50316_x
crossref_primary_10_1016_j_virol_2014_02_018
crossref_primary_10_1016_j_ijpharm_2020_119689
crossref_primary_10_3390_ijms231710067
crossref_primary_10_1007_s10096_020_03978_6
crossref_primary_10_4081_jphr_2021_2941
crossref_primary_10_1139_cjas_2018_0252
crossref_primary_10_1002_vms3_360
crossref_primary_10_1007_s12041_021_01262_w
crossref_primary_10_1111_tbed_14478
crossref_primary_10_1002_jobm_201700398
crossref_primary_10_1186_s12985_021_01633_w
crossref_primary_10_3390_microorganisms9040793
crossref_primary_10_22207_JPAM_14_4_03
crossref_primary_10_4103_jacr_jacr_89_20
crossref_primary_10_1016_j_tvjl_2014_04_017
crossref_primary_10_35366_94636
crossref_primary_10_52547_jccs_2_3_129
crossref_primary_10_1186_s40168_024_01950_6
crossref_primary_10_1007_s00705_021_05091_1
crossref_primary_10_4103_jfmpc_jfmpc_902_20
crossref_primary_10_1016_j_medj_2024_11_006
crossref_primary_10_26634_jls_2_1_19757
crossref_primary_10_1002_jmv_26598
crossref_primary_10_5155_eurjchem_12_2_222_234_2084
crossref_primary_10_2174_2666796701999201209144207
crossref_primary_10_1016_j_jinf_2014_02_012
crossref_primary_10_1002_masy_202000336
crossref_primary_10_1080_13102818_2020_1843539
crossref_primary_10_1097_MD_0000000000020956
crossref_primary_10_3389_fmicb_2017_01510
crossref_primary_10_15547_tjs_2020_s_01_042
crossref_primary_10_3390_v11060573
crossref_primary_10_22182_pr_6642020_1
crossref_primary_10_1007_s12250_021_00364_0
crossref_primary_10_1080_23311916_2021_2017580
crossref_primary_10_1016_j_tim_2016_09_001
crossref_primary_10_1007_s13337_022_00800_z
crossref_primary_10_3390_ijms222111483
crossref_primary_10_1098_rsos_211573
crossref_primary_10_3390_v5112679
crossref_primary_10_3138_anth_2018_0039_r1
crossref_primary_10_1016_j_chempr_2022_03_012
crossref_primary_10_1016_j_sintl_2020_100079
crossref_primary_10_1016_j_scitotenv_2019_134612
crossref_primary_10_1093_ve_vex007
crossref_primary_10_1016_j_scitotenv_2020_143283
crossref_primary_10_17116_klinderma20212003177
crossref_primary_10_3389_fimmu_2021_582556
crossref_primary_10_1093_infdis_jiv380
crossref_primary_10_1007_s11625_020_00866_y
crossref_primary_10_1177_24723444241237302
crossref_primary_10_1186_s12985_015_0446_6
crossref_primary_10_1007_s12559_022_10076_6
crossref_primary_10_1007_s11356_021_17481_8
crossref_primary_10_1515_dx_2020_0057
crossref_primary_10_1515_ntrev_2022_0093
crossref_primary_10_1016_j_tim_2015_06_003
crossref_primary_10_1038_emi_2016_48
crossref_primary_10_3390_vaccines9111279
crossref_primary_10_1086_725081
crossref_primary_10_61186_rbmb_13_1_124
crossref_primary_10_1016_j_foodcont_2021_108108
crossref_primary_10_1111_his_14138
crossref_primary_10_1093_gigascience_giad001
crossref_primary_10_3389_fmicb_2020_580137
crossref_primary_10_1371_journal_pone_0243524
crossref_primary_10_1186_s42269_021_00540_y
crossref_primary_10_1128_mbio_01426_23
crossref_primary_10_1016_j_epidem_2020_100410
crossref_primary_10_52711_0974_360X_2021_00408
crossref_primary_10_24072_pcjournal_206
crossref_primary_10_1038_s41392_023_01631_0
crossref_primary_10_3390_v14071551
crossref_primary_10_3390_v13020348
crossref_primary_10_1093_infdis_jiv392
crossref_primary_10_3389_fmolb_2021_671923
crossref_primary_10_1016_j_dci_2025_105363
crossref_primary_10_1371_journal_pone_0276773
crossref_primary_10_1007_s00253_020_10645_5
crossref_primary_10_47853_FAS_2022_e29
crossref_primary_10_1080_07391102_2021_1886991
crossref_primary_10_1007_s41324_022_00443_8
crossref_primary_10_1016_j_ejphar_2020_173659
crossref_primary_10_1016_j_scib_2023_02_001
crossref_primary_10_1002_jmv_25864
crossref_primary_10_36106_ijar_0701623
crossref_primary_10_5812_zjrms_109853
crossref_primary_10_1080_14712598_2022_2078160
crossref_primary_10_1016_S1473_3099_14_70828_X
crossref_primary_10_1016_j_meegid_2018_03_030
crossref_primary_10_1016_j_imu_2020_100451
crossref_primary_10_18231_j_achr_2022_020
crossref_primary_10_4102_ojvr_v87i1_1895
crossref_primary_10_1111_tbed_12327
crossref_primary_10_1016_j_virol_2016_04_025
crossref_primary_10_1002_ptr_6887
crossref_primary_10_1016_j_xcrm_2022_100524
crossref_primary_10_3390_pathogens10060636
crossref_primary_10_1016_j_meegid_2014_11_014
crossref_primary_10_1016_j_marpolbul_2023_114746
crossref_primary_10_1055_s_0040_1718415
crossref_primary_10_17533_udea_rccp_v38n3a8
crossref_primary_10_22141_ogh_2_4_2021_251145
crossref_primary_10_1016_j_jinf_2013_09_029
crossref_primary_10_1016_S1473_3099_14_70827_8
crossref_primary_10_1002_wnan_1707
crossref_primary_10_1016_j_antiviral_2018_10_007
crossref_primary_10_3390_immuno3030020
crossref_primary_10_1016_j_micinf_2014_11_007
crossref_primary_10_1111_ijd_15154
crossref_primary_10_3390_v13101993
crossref_primary_10_1007_s00604_020_04615_x
crossref_primary_10_4103_1995_7645_359785
crossref_primary_10_3382_ps_pew332
crossref_primary_10_4103_ijmm_IJMM_20_279
crossref_primary_10_1136_bmjophth_2020_000630
crossref_primary_10_1038_s41598_022_23925_z
crossref_primary_10_3201_eid2007_140296
crossref_primary_10_1128_genomeA_01191_14
crossref_primary_10_1002_bies_202100261
crossref_primary_10_1038_emi_2015_28
crossref_primary_10_2147_RMHP_S284557
crossref_primary_10_3389_fphar_2021_758159
crossref_primary_10_1093_cid_ciaa644
crossref_primary_10_1074_jbc_RA118_001897
crossref_primary_10_1146_annurev_virology_110615_042203
crossref_primary_10_1016_j_biopha_2021_111956
crossref_primary_10_3233_WOR_203395
crossref_primary_10_1016_j_heliyon_2020_e04897
crossref_primary_10_25259_JGOH_19_2020
crossref_primary_10_1007_s13149_015_0448_z
crossref_primary_10_1007_s12603_020_1385_5
crossref_primary_10_1098_rsos_230578
crossref_primary_10_1002_bies_202200080
crossref_primary_10_1016_j_trsl_2021_10_007
crossref_primary_10_1016_j_jpba_2017_06_071
crossref_primary_10_1016_j_xcrm_2022_100774
crossref_primary_10_3389_fmicb_2022_789882
crossref_primary_10_52679_tabcj_2021_0012
crossref_primary_10_1128_genomeA_00369_18
crossref_primary_10_1016_j_meegid_2021_104709
crossref_primary_10_3390_v12121465
crossref_primary_10_3390_ijms22115672
crossref_primary_10_1080_22221751_2020_1719902
crossref_primary_10_1038_nrd_2015_37
crossref_primary_10_2174_012772574X269376231107095831
crossref_primary_10_1007_s42770_019_00065_7
crossref_primary_10_21673_anadoluklin_708151
crossref_primary_10_1128_CMR_00102_14
crossref_primary_10_1128_CMR_00102_15
crossref_primary_10_1111_ibi_12434
crossref_primary_10_3892_etm_2022_11343
crossref_primary_10_1016_j_coviro_2015_01_006
crossref_primary_10_1128_jvi_00065_22
crossref_primary_10_3390_jcm9051473
crossref_primary_10_1007_s41062_020_00325_8
crossref_primary_10_2139_ssrn_3588991
crossref_primary_10_3390_antiox12061305
crossref_primary_10_1016_j_mib_2024_102474
crossref_primary_10_3390_ani12111413
crossref_primary_10_1186_s13287_021_02683_1
crossref_primary_10_3390_jcm9113630
crossref_primary_10_1093_molbev_msae202
crossref_primary_10_3390_ani11051216
crossref_primary_10_3390_antibiotics10111294
crossref_primary_10_3390_molecules25245905
crossref_primary_10_1186_s12985_019_1182_0
crossref_primary_10_3390_microorganisms8111704
crossref_primary_10_1007_s12250_015_3683_3
crossref_primary_10_3390_jcm9113518
crossref_primary_10_1063_5_0021554
crossref_primary_10_1016_j_coviro_2018_12_001
crossref_primary_10_1371_journal_pntd_0003318
crossref_primary_10_1016_j_heliyon_2021_e08166
crossref_primary_10_1016_j_talanta_2021_122609
crossref_primary_10_1016_j_scitotenv_2020_143352
crossref_primary_10_18231_j_ijmr_2020_062
crossref_primary_10_1016_j_virol_2016_04_008
crossref_primary_10_1039_D0BM02077J
crossref_primary_10_3390_v13061022
crossref_primary_10_36106_gjra_8013840
crossref_primary_10_33889_IJMEMS_2020_5_4_052
crossref_primary_10_3390_v16071133
crossref_primary_10_3201_eid2806_211718
crossref_primary_10_1126_scitranslmed_3008140
crossref_primary_10_1186_s13567_024_01445_0
crossref_primary_10_1128_jvi_01719_22
crossref_primary_10_3389_fendo_2020_00622
crossref_primary_10_4103_CRST_CRST_174_20
crossref_primary_10_1016_j_prevetmed_2021_105281
crossref_primary_10_3390_biomedicines9081018
crossref_primary_10_2139_ssrn_3759263
crossref_primary_10_1128_mbio_02324_24
crossref_primary_10_1016_j_scitotenv_2020_142372
crossref_primary_10_1186_s12985_015_0378_1
crossref_primary_10_2478_jvetres_2018_0035
crossref_primary_10_2174_1574885515999200813193747
Cites_doi 10.1371/journal.pone.0013757
10.4049/jimmunol.175.10.6702
10.3201/eid1503.081410
10.1128/JVI.06203-11
10.1525/aa.1992.94.1.02a00070
10.1016/S0140-6736(13)60903-4
10.1292/jvms.09-0050
10.1128/CMR.00023-07
10.1128/JVI.00592-10
10.1016/j.dci.2011.02.011
10.1038/nature12005
10.1016/S0140-6736(09)62126-7
10.4049/jimmunol.1003115
10.1016/j.dci.2011.11.008
10.1128/JVI.00742-11
10.1016/j.dci.2010.06.004
10.3181/0903-MR-94
10.1038/emi.2012.45
10.1016/j.virol.2006.02.041
10.1128/JVI.06100-11
10.1111/j.1865-1682.2012.01357.x
10.1128/JVI.02656-12
10.1073/pnas.1218509110
10.1073/pnas.1212579109
10.1038/emi.2012.24
10.1007/s00251-010-0425-4
10.1016/j.jfma.2013.05.010
10.1128/MMBR.56.1.152-179.1992
10.1016/j.molimm.2007.10.018
10.1002/rmv.520
10.1111/j.1751-0813.2011.00734.x
10.1128/JVI.64.7.3297-3303.1990
10.1073/pnas.1116200109
10.1099/vir.0.026443-0
10.1073/pnas.0504662102
10.1038/ncomms1158
10.1016/j.dci.2010.08.011
10.1371/journal.ppat.1002730
10.4172/1747-0862.1000026
10.1128/JVI.02182-06
10.1128/JVI.71.8.6128-6135.1997
10.1128/CMR.00017-06
10.1099/vir.0.80478-0
10.1128/JVI.00712-11
10.1089/jir.2007.0135
10.1128/mBio.00166-12
10.1128/JVI.72.9.7367-7373.1998
10.1126/science.1230835
10.1128/JVI.02219-09
10.1186/1471-2164-11-444
10.1128/CMR.05012-11
10.1371/journal.pone.0038665
10.1016/j.molimm.2010.12.011
10.1073/pnas.91.16.7782
10.1111/j.1863-2378.2012.01528.x
10.1086/524991
10.1128/JVI.01977-08
10.1099/vir.0.82378-0
10.1016/j.virol.2005.08.032
10.1128/JVI.02683-07
10.1111/j.1750-2659.2012.00397.x
10.1089/jir.2005.25.467
10.1186/1471-2334-7-132
10.4049/jimmunol.1003712
10.1073/pnas.0506735102
10.1128/JVI.02688-12
10.1128/JVI.05474-11
10.1073/pnas.0409465102
10.1186/1471-2164-13-261
10.1128/JVI.01677-12
10.1016/j.vetmic.2012.11.040
10.1371/journal.pone.0025385
10.1038/nbt1375
10.1371/journal.ppat.1001034
10.1016/j.coviro.2011.10.012
10.1038/ncomms1804
10.1128/JVI.01305-12
10.4142/jvs.2011.12.1.7
10.1128/JVI.06540-11
10.1016/j.jinf.2012.10.002
10.1126/science.1122438
10.1016/j.molimm.2011.05.025
10.3201/eid1805.111922
10.1093/infdis/jit123
10.3201/eid1903.121503
10.3382/ps.2012-02394
10.1016/j.molimm.2012.03.034
10.1128/JVI.05369-11
10.1099/vir.0.79878-0
10.1016/j.dci.2005.06.018
10.1258/ebm.2010.010071
10.4049/jimmunol.0903092
10.1056/NEJMoa0903812
10.1073/pnas.1001755107
10.1128/JVI.06927-11
10.1371/journal.ppat.1003059
10.1080/03079457.2012.732691
10.1073/pnas.0909696106
10.1128/JVI.00281-12
10.1073/pnas.1200039109
10.1159/000103180
10.3201/eid1509.090224
10.1099/vir.0.049759-0
10.1128/mBio.00515-12
10.1016/j.jinf.2012.12.003
10.1128/JCM.01142-12
10.1128/JVI.01394-09
ContentType Journal Article
Copyright 2013 Elsevier Ltd
Elsevier Ltd
Copyright © 2013 Elsevier Ltd. All rights reserved.
Copyright © 2013 Elsevier Ltd. All rights reserved. 2013 Elsevier Ltd
Copyright_xml – notice: 2013 Elsevier Ltd
– notice: Elsevier Ltd
– notice: Copyright © 2013 Elsevier Ltd. All rights reserved.
– notice: Copyright © 2013 Elsevier Ltd. All rights reserved. 2013 Elsevier Ltd
DBID FBQ
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
7S9
L.6
5PM
DOI 10.1016/j.tim.2013.05.005
DatabaseName AGRIS
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
PubMed Central (Full Participant titles)
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitleList


MEDLINE - Academic


AGRICOLA
MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 3
  dbid: FBQ
  name: AGRIS
  url: http://www.fao.org/agris/Centre.asp?Menu_1ID=DB&Menu_2ID=DB1&Language=EN&Content=http://www.fao.org/agris/search?Language=EN
  sourceTypes: Publisher
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 1878-4380
EndPage 555
ExternalDocumentID PMC7126491
23770275
10_1016_j_tim_2013_05_005
US201600121269
S0966842X13000899
1_s2_0_S0966842X13000899
Genre Research Support, Non-U.S. Gov't
Journal Article
Review
GroupedDBID ---
--K
--M
-DZ
.1-
.FO
.~1
0R~
123
1B1
1P~
1RT
1~.
1~5
29Q
4.4
457
4G.
53G
5RE
5VS
7-5
71M
8P~
9JM
AAAJQ
AAEDT
AAEDW
AAHBH
AAIKJ
AAKOC
AALRI
AAMRU
AAOAW
AAQFI
AAQXK
AARKO
AATTM
AAXKI
AAXUO
AAYWO
ABBQC
ABFNM
ABFRF
ABJNI
ABMAC
ABMZM
ABWVN
ABXDB
ACDAQ
ACGFO
ACGFS
ACIEU
ACIWK
ACPRK
ACRLP
ACRPL
ACVFH
ADBBV
ADCNI
ADEZE
ADMUD
ADNMO
AEBSH
AEFWE
AEIPS
AEKER
AENEX
AEUPX
AEVXI
AFPUW
AFRAH
AFRHN
AFTJW
AFXIZ
AGCQF
AGEKW
AGHFR
AGQPQ
AGUBO
AGYEJ
AHHHB
AIEXJ
AIGII
AIIUN
AIKHN
AITUG
AJRQY
AJUYK
AKBMS
AKRWK
AKYEP
ALMA_UNASSIGNED_HOLDINGS
AMRAJ
ANKPU
ANZVX
APXCP
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLXMC
BNPGV
CJTIS
CNWQP
CS3
EBS
EFJIC
EFKBS
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FEDTE
FGOYB
FIRID
FNPLU
FYGXN
G-2
G-Q
GBLVA
HEJ
HMG
HMK
HMO
HVGLF
HZ~
H~9
IHE
J1W
KOM
LUGTX
M29
M41
MO0
N9A
O-L
O9-
OAUVE
OD-
OO.
OZT
P-8
P-9
P2P
PC.
PQQKQ
Q38
R2-
ROL
RPZ
SAE
SCC
SDF
SDG
SDP
SES
SEW
SIN
SPCBC
SSH
SSI
SSZ
T5K
WUQ
XPP
Y6R
Z5R
ZCA
ZY4
~G-
AACTN
ABTAH
AFCTW
AFKWA
AJOXV
AMFUW
RCE
RIG
AAIAV
ZA5
FBQ
AAYXX
AGRNS
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
7S9
L.6
5PM
ID FETCH-LOGICAL-c679t-fa1016fcfd345b183eb420e904189217c216e139a18d6333c5de0c90ca81195a3
IEDL.DBID .~1
ISSN 0966-842X
1878-4380
IngestDate Thu Aug 21 18:01:03 EDT 2025
Tue Aug 05 11:16:10 EDT 2025
Fri Jul 11 10:17:20 EDT 2025
Thu Apr 03 07:07:06 EDT 2025
Thu Apr 24 22:56:00 EDT 2025
Tue Jul 01 03:03:06 EDT 2025
Thu Apr 03 09:45:24 EDT 2025
Thu Jun 13 11:13:39 EDT 2024
Sun Feb 23 10:19:30 EST 2025
Tue Aug 26 17:00:54 EDT 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 10
Keywords influenza
emerging infectious disease
coronavirus
RNA virus
virus evolution
Language English
License Copyright © 2013 Elsevier Ltd. All rights reserved.
Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c679t-fa1016fcfd345b183eb420e904189217c216e139a18d6333c5de0c90ca81195a3
Notes http://dx.doi.org/10.1016/j.tim.2013.05.005
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
ObjectType-Review-3
content type line 23
These authors contributed equally to the manuscript.
OpenAccessLink https://pubmed.ncbi.nlm.nih.gov/PMC7126491
PMID 23770275
PQID 1443401849
PQPubID 23479
PageCount 12
ParticipantIDs pubmedcentral_primary_oai_pubmedcentral_nih_gov_7126491
proquest_miscellaneous_1803101396
proquest_miscellaneous_1443401849
pubmed_primary_23770275
crossref_primary_10_1016_j_tim_2013_05_005
crossref_citationtrail_10_1016_j_tim_2013_05_005
fao_agris_US201600121269
elsevier_sciencedirect_doi_10_1016_j_tim_2013_05_005
elsevier_clinicalkeyesjournals_1_s2_0_S0966842X13000899
elsevier_clinicalkey_doi_10_1016_j_tim_2013_05_005
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2013-10-01
PublicationDateYYYYMMDD 2013-10-01
PublicationDate_xml – month: 10
  year: 2013
  text: 2013-10-01
  day: 01
PublicationDecade 2010
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Trends in microbiology (Regular ed.)
PublicationTitleAlternate Trends Microbiol
PublicationYear 2013
Publisher Elsevier Ltd
Publisher_xml – name: Elsevier Ltd
References Desvaux (bib0315) 2009; 15
Hofmann (bib0270) 2005; 102
Zimmermann (bib0525) 2011; 85
Zell (bib0510) 2007; 88
Chan (bib0370) 2010; 5
Magor (bib0185) 2011; 35
Shi (bib0515) 2012; 86
Baker (bib0100) 2010; 62
Muller (bib0265) 2012; 3
Boni (bib0345) 2008; 82
Hoffmann (bib0415) 2012; 86
Crispe (bib0320) 2011; 89
Moon (bib0195) 2005; 175
Li (bib0405) 1990; 64
Chan (bib0040) 2013; 112
Fleming-Canepa (bib0150) 2011; 48
Zheng (bib0365) 2010; 235
Chen (bib0060) 2013; 381
Calisher (bib0065) 2006; 19
Pica (bib0330) 2012; 109
Iha (bib0075) 2010; 72
Woo (bib0035) 2012; 1
Manz (bib0535) 2012; 3
Kaiser (bib0455) 2005; 25
Bratsch (bib0465) 2011; 35
Lau (bib0230) 2012; 86
Barber (bib0165) 2010; 107
Sun (bib0420) 2013; 87
Ratcliffe (bib0475) 2006; 30
Edens (bib0005) 1992; 94
Jiao (bib0445) 2012; 91
Pfefferle (bib0240) 2009; 15
Kuchipudi (bib0360) 2009; 3
Lau (bib0105) 2010; 84
Chandrasekaran (bib0375) 2008; 26
Chan (bib0025) 2012; 65
Vanderven (bib0145) 2012; 51
Zhu (bib0110) 2013; 110
Gabriel (bib0485) 2011; 2
Cornelissen (bib0155) 2012; 41
Karpala (bib0430) 2011; 186
Baker (bib0070) 2013; 60
Yamada (bib0490) 2010; 6
Kepler (bib0085) 2010; 11
Anthony (bib0250) 2013; 94
Mehle (bib0500) 2012; 86
Jiang (bib0260) 2013; 66
Wang (bib0395) 2009; 106
Graham, Baric (bib0235) 2010; 84
Zhou (bib0095) 2011; 6
Pasick (bib0340) 2005; 86
Zhou (bib0090) 2011; 186
Woo (bib0205) 2009; 234
Woo (bib0030) 2007; 81
Jonges (bib0495) 2011; 85
Zhu (bib0115) 2012; 109
Cheng (bib0015) 2007; 20
Liang (bib0160) 2011; 48
Hatchette (bib0140) 2004; 85
Chen (bib0505) 2010; 84
Croville (bib0410) 2012; 50
Yamada (bib0355) 2012; 86
Wong (bib0045) 2007; 17
Globig (bib0180) 2013; 60
Murcia (bib0350) 2012; 8
Anthony (bib0325) 2012; 3
Yang (bib0400) 2012; 86
Cheng (bib0295) 2012; 25
Liniger (bib0170) 2012; 86
Han (bib0460) 2008; 28
Sharp (bib0130) 1997; 71
Webster (bib0125) 1992; 56
Volmer (bib0440) 2011; 92
Klein (bib0275) 1994; 91
Woo (bib0220) 2009; 83
Muramoto (bib0520) 2013; 87
Guan (bib0135) 2007; 7
Chan (bib0280) 2013; 207
Shinde (bib0305) 2009; 360
Olsen (bib0120) 2006; 312
Downing (bib0435) 2010; 184
To (bib0055) 2012; 1
Butler (bib0480) 2011; 35
Woo (bib0225) 2012; 86
Lau (bib0020) 2005; 102
Raj (bib0285) 2013; 495
Xu (bib0010) 2012; 7
Zhang (bib0425) 2013; 339
Hulse-Post (bib0200) 2005; 102
Woo (bib0215) 2006; 351
MacDonald (bib0175) 2008; 45
Tong (bib0050) 2012; 109
Rajsbaum (bib0530) 2012; 8
Cowled (bib0080) 2012; 36
Bolles (bib0210) 2011; 1
Annan (bib0255) 2013; 19
Amonsin (bib0310) 2006; 344
Londt (bib0290) 2013; 162
Lau (bib0245) 2012; 86
Miller (bib0335) 2010; 375
Causey, Edwards (bib0190) 2008; 197
Papenfuss (bib0470) 2012; 13
Ito (bib0380) 1998; 72
Londt (bib0385) 2013; 7
Lindstrom (bib0300) 2012; 18
MacDonald (bib0450) 2007; 117
Yu (bib0390) 2011; 12
Liniger (10.1016/j.tim.2013.05.005_bib0170) 2012; 86
Woo (10.1016/j.tim.2013.05.005_bib0035) 2012; 1
MacDonald (10.1016/j.tim.2013.05.005_bib0450) 2007; 117
Graham (10.1016/j.tim.2013.05.005_bib0235) 2010; 84
Guan (10.1016/j.tim.2013.05.005_bib0135) 2007; 7
Wang (10.1016/j.tim.2013.05.005_bib0395) 2009; 106
Chan (10.1016/j.tim.2013.05.005_bib0370) 2010; 5
Chen (10.1016/j.tim.2013.05.005_bib0505) 2010; 84
Chan (10.1016/j.tim.2013.05.005_bib0025) 2012; 65
Moon (10.1016/j.tim.2013.05.005_bib0195) 2005; 175
Lau (10.1016/j.tim.2013.05.005_bib0230) 2012; 86
Annan (10.1016/j.tim.2013.05.005_bib0255) 2013; 19
Jiang (10.1016/j.tim.2013.05.005_bib0260) 2013; 66
Anthony (10.1016/j.tim.2013.05.005_bib0325) 2012; 3
Wong (10.1016/j.tim.2013.05.005_bib0045) 2007; 17
Cheng (10.1016/j.tim.2013.05.005_bib0295) 2012; 25
Downing (10.1016/j.tim.2013.05.005_bib0435) 2010; 184
Zhou (10.1016/j.tim.2013.05.005_bib0090) 2011; 186
Chan (10.1016/j.tim.2013.05.005_bib0280) 2013; 207
Cheng (10.1016/j.tim.2013.05.005_bib0015) 2007; 20
Desvaux (10.1016/j.tim.2013.05.005_bib0315) 2009; 15
Edens (10.1016/j.tim.2013.05.005_bib0005) 1992; 94
Hulse-Post (10.1016/j.tim.2013.05.005_bib0200) 2005; 102
Bratsch (10.1016/j.tim.2013.05.005_bib0465) 2011; 35
Pfefferle (10.1016/j.tim.2013.05.005_bib0240) 2009; 15
Manz (10.1016/j.tim.2013.05.005_bib0535) 2012; 3
Iha (10.1016/j.tim.2013.05.005_bib0075) 2010; 72
Xu (10.1016/j.tim.2013.05.005_bib0010) 2012; 7
Globig (10.1016/j.tim.2013.05.005_bib0180) 2013; 60
Calisher (10.1016/j.tim.2013.05.005_bib0065) 2006; 19
Zell (10.1016/j.tim.2013.05.005_bib0510) 2007; 88
Chan (10.1016/j.tim.2013.05.005_bib0040) 2013; 112
Shi (10.1016/j.tim.2013.05.005_bib0515) 2012; 86
Kuchipudi (10.1016/j.tim.2013.05.005_bib0360) 2009; 3
Chandrasekaran (10.1016/j.tim.2013.05.005_bib0375) 2008; 26
Shinde (10.1016/j.tim.2013.05.005_bib0305) 2009; 360
Lau (10.1016/j.tim.2013.05.005_bib0020) 2005; 102
Zhu (10.1016/j.tim.2013.05.005_bib0115) 2012; 109
Olsen (10.1016/j.tim.2013.05.005_bib0120) 2006; 312
Gabriel (10.1016/j.tim.2013.05.005_bib0485) 2011; 2
Yu (10.1016/j.tim.2013.05.005_bib0390) 2011; 12
Kaiser (10.1016/j.tim.2013.05.005_bib0455) 2005; 25
Boni (10.1016/j.tim.2013.05.005_bib0345) 2008; 82
Miller (10.1016/j.tim.2013.05.005_bib0335) 2010; 375
Papenfuss (10.1016/j.tim.2013.05.005_bib0470) 2012; 13
Bolles (10.1016/j.tim.2013.05.005_bib0210) 2011; 1
Rajsbaum (10.1016/j.tim.2013.05.005_bib0530) 2012; 8
Liang (10.1016/j.tim.2013.05.005_bib0160) 2011; 48
Karpala (10.1016/j.tim.2013.05.005_bib0430) 2011; 186
Lau (10.1016/j.tim.2013.05.005_bib0105) 2010; 84
Anthony (10.1016/j.tim.2013.05.005_bib0250) 2013; 94
Londt (10.1016/j.tim.2013.05.005_bib0385) 2013; 7
Yamada (10.1016/j.tim.2013.05.005_bib0490) 2010; 6
Pasick (10.1016/j.tim.2013.05.005_bib0340) 2005; 86
Tong (10.1016/j.tim.2013.05.005_bib0050) 2012; 109
Li (10.1016/j.tim.2013.05.005_bib0405) 1990; 64
Pica (10.1016/j.tim.2013.05.005_bib0330) 2012; 109
Cowled (10.1016/j.tim.2013.05.005_bib0080) 2012; 36
Woo (10.1016/j.tim.2013.05.005_bib0225) 2012; 86
Sharp (10.1016/j.tim.2013.05.005_bib0130) 1997; 71
Chen (10.1016/j.tim.2013.05.005_bib0060) 2013; 381
Cornelissen (10.1016/j.tim.2013.05.005_bib0155) 2012; 41
Lindstrom (10.1016/j.tim.2013.05.005_bib0300) 2012; 18
Baker (10.1016/j.tim.2013.05.005_bib0100) 2010; 62
Crispe (10.1016/j.tim.2013.05.005_bib0320) 2011; 89
Baker (10.1016/j.tim.2013.05.005_bib0070) 2013; 60
Muramoto (10.1016/j.tim.2013.05.005_bib0520) 2013; 87
Murcia (10.1016/j.tim.2013.05.005_bib0350) 2012; 8
Croville (10.1016/j.tim.2013.05.005_bib0410) 2012; 50
Zhu (10.1016/j.tim.2013.05.005_bib0110) 2013; 110
Zimmermann (10.1016/j.tim.2013.05.005_bib0525) 2011; 85
Kepler (10.1016/j.tim.2013.05.005_bib0085) 2010; 11
Barber (10.1016/j.tim.2013.05.005_bib0165) 2010; 107
MacDonald (10.1016/j.tim.2013.05.005_bib0175) 2008; 45
Fleming-Canepa (10.1016/j.tim.2013.05.005_bib0150) 2011; 48
Klein (10.1016/j.tim.2013.05.005_bib0275) 1994; 91
Woo (10.1016/j.tim.2013.05.005_bib0220) 2009; 83
Webster (10.1016/j.tim.2013.05.005_bib0125) 1992; 56
Zhang (10.1016/j.tim.2013.05.005_bib0425) 2013; 339
Londt (10.1016/j.tim.2013.05.005_bib0290) 2013; 162
Woo (10.1016/j.tim.2013.05.005_bib0030) 2007; 81
Jonges (10.1016/j.tim.2013.05.005_bib0495) 2011; 85
Mehle (10.1016/j.tim.2013.05.005_bib0500) 2012; 86
Butler (10.1016/j.tim.2013.05.005_bib0480) 2011; 35
Vanderven (10.1016/j.tim.2013.05.005_bib0145) 2012; 51
Zheng (10.1016/j.tim.2013.05.005_bib0365) 2010; 235
Muller (10.1016/j.tim.2013.05.005_bib0265) 2012; 3
Raj (10.1016/j.tim.2013.05.005_bib0285) 2013; 495
Magor (10.1016/j.tim.2013.05.005_bib0185) 2011; 35
Causey (10.1016/j.tim.2013.05.005_bib0190) 2008; 197
Hoffmann (10.1016/j.tim.2013.05.005_bib0415) 2012; 86
Woo (10.1016/j.tim.2013.05.005_bib0205) 2009; 234
Woo (10.1016/j.tim.2013.05.005_bib0215) 2006; 351
Sun (10.1016/j.tim.2013.05.005_bib0420) 2013; 87
Lau (10.1016/j.tim.2013.05.005_bib0245) 2012; 86
Jiao (10.1016/j.tim.2013.05.005_bib0445) 2012; 91
Zhou (10.1016/j.tim.2013.05.005_bib0095) 2011; 6
Ito (10.1016/j.tim.2013.05.005_bib0380) 1998; 72
Hofmann (10.1016/j.tim.2013.05.005_bib0270) 2005; 102
Han (10.1016/j.tim.2013.05.005_bib0460) 2008; 28
Yang (10.1016/j.tim.2013.05.005_bib0400) 2012; 86
Volmer (10.1016/j.tim.2013.05.005_bib0440) 2011; 92
Hatchette (10.1016/j.tim.2013.05.005_bib0140) 2004; 85
Amonsin (10.1016/j.tim.2013.05.005_bib0310) 2006; 344
Yamada (10.1016/j.tim.2013.05.005_bib0355) 2012; 86
Ratcliffe (10.1016/j.tim.2013.05.005_bib0475) 2006; 30
To (10.1016/j.tim.2013.05.005_bib0055) 2012; 1
References_xml – volume: 48
  start-page: 924
  year: 2011
  end-page: 930
  ident: bib0160
  article-title: Immune-related gene expression in response to H5N1 avian influenza virus infection in chicken and duck embryonic fibroblasts
  publication-title: Mol. Immunol.
– volume: 84
  start-page: 3134
  year: 2010
  end-page: 3146
  ident: bib0235
  article-title: Recombination, reservoirs, and the modular spike: mechanisms of coronavirus cross-species transmission
  publication-title: J. Virol.
– volume: 3
  start-page: 143
  year: 2009
  end-page: 151
  ident: bib0360
  article-title: Differences in influenza virus receptors in chickens and ducks: Implications for interspecies transmission
  publication-title: J. Mol. Genet. Med.
– volume: 85
  start-page: 8133
  year: 2011
  end-page: 8140
  ident: bib0525
  article-title: The viral nucleoprotein determines Mx sensitivity of influenza A viruses
  publication-title: J. Virol.
– volume: 41
  start-page: 519
  year: 2012
  end-page: 529
  ident: bib0155
  article-title: Differential innate responses of chickens and ducks to low-pathogenic avian influenza
  publication-title: Avian Pathol.
– volume: 15
  start-page: 1377
  year: 2009
  end-page: 1384
  ident: bib0240
  article-title: Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats, Ghana
  publication-title: Emerg. Infect. Dis.
– volume: 87
  start-page: 2963
  year: 2013
  end-page: 2968
  ident: bib0420
  article-title: Amino acid 316 of hemagglutinin and the neuraminidase stalk length influence virulence of H9N2 influenza virus in chickens and mice
  publication-title: J. Virol.
– volume: 20
  start-page: 660
  year: 2007
  end-page: 694
  ident: bib0015
  article-title: Severe acute respiratory syndrome coronavirus as an agent of emerging and reemerging infection
  publication-title: Clin. Microbiol. Rev.
– volume: 3
  year: 2012
  ident: bib0325
  article-title: Emergence of fatal avian influenza in New England harbor seals
  publication-title: mBio
– volume: 186
  start-page: 5397
  year: 2011
  end-page: 5405
  ident: bib0430
  article-title: Characterization of chicken Mda5 activity: regulation of IFN-beta in the absence of RIG-I functionality
  publication-title: J. Immunol.
– volume: 72
  start-page: 7367
  year: 1998
  end-page: 7373
  ident: bib0380
  article-title: Molecular basis for the generation in pigs of influenza A viruses with pandemic potential
  publication-title: J. Virol.
– volume: 8
  start-page: e1002730
  year: 2012
  ident: bib0350
  article-title: Evolution of an Eurasian avian-like influenza virus in naive and vaccinated pigs
  publication-title: PLoS Pathog.
– volume: 51
  start-page: 316
  year: 2012
  end-page: 324
  ident: bib0145
  article-title: Avian influenza rapidly induces antiviral genes in duck lung and intestine
  publication-title: Mol. Immunol.
– volume: 1
  start-page: 624
  year: 2011
  end-page: 634
  ident: bib0210
  article-title: SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission
  publication-title: Curr. Opin. Virol.
– volume: 109
  start-page: 2573
  year: 2012
  end-page: 2578
  ident: bib0330
  article-title: Hemagglutinin stalk antibodies elicited by the 2009 pandemic influenza virus as a mechanism for the extinction of seasonal H1N1 viruses
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 66
  start-page: 464
  year: 2013
  end-page: 466
  ident: bib0260
  article-title: A predicted receptor-binding and critical neutralizing domain in S protein of the novel human coronavirus HCoV-EMC
  publication-title: J. Infect.
– volume: 109
  start-page: 18903
  year: 2012
  end-page: 18908
  ident: bib0115
  article-title: Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 19
  start-page: 456
  year: 2013
  end-page: 459
  ident: bib0255
  article-title: Human betacoronavirus 2c EMC/2012-related viruses in bats, Ghana and Europe
  publication-title: Emerg. Infect. Dis.
– volume: 109
  start-page: 4269
  year: 2012
  end-page: 4274
  ident: bib0050
  article-title: A distinct lineage of influenza A virus from bats
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 50
  start-page: 2881
  year: 2012
  end-page: 2887
  ident: bib0410
  article-title: Field monitoring of avian influenza viruses: whole-genome sequencing and tracking of neuraminidase evolution using 454 pyrosequencing
  publication-title: J. Clin. Microbiol.
– volume: 184
  start-page: 6993
  year: 2010
  end-page: 7000
  ident: bib0435
  article-title: The differential evolutionary dynamics of avian cytokine and TLR gene classes
  publication-title: J. Immunol.
– volume: 94
  start-page: 118
  year: 1992
  end-page: 139
  ident: bib0005
  article-title: Dynamics of trade in the ancient mesopotamian “World System”
  publication-title: Am. Anthropol. New Ser.
– volume: 36
  start-page: 657
  year: 2012
  end-page: 664
  ident: bib0080
  article-title: Molecular characterisation of RIG-I-like helicases in the black flying fox,
  publication-title: Dev. Comp. Immunol.
– volume: 495
  start-page: 251
  year: 2013
  end-page: 254
  ident: bib0285
  article-title: Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC
  publication-title: Nature
– volume: 6
  start-page: e25385
  year: 2011
  ident: bib0095
  article-title: Type III IFN receptor expression and functional characterisation in the pteropid bat,
  publication-title: PLoS ONE
– volume: 7
  start-page: 393
  year: 2013
  end-page: 402
  ident: bib0385
  article-title: The infectivity of pandemic 2009 H1N1 and avian influenza viruses for pigs: an assessment by ex vivo respiratory tract organ culture
  publication-title: Influenza Other Respir. Viruses
– volume: 89
  start-page: 27
  year: 2011
  end-page: 28
  ident: bib0320
  article-title: Infection of dogs with equine influenza virus: evidence for transmission from horses during the Australian outbreak
  publication-title: Aust. Vet. J.
– volume: 86
  start-page: 11906
  year: 2012
  end-page: 11918
  ident: bib0245
  article-title: Recent transmission of a novel alphacoronavirus, bat coronavirus HKU10, from Leschenault's rousettes to pomona leaf-nosed bats: first evidence of interspecies transmission of coronavirus between bats of different suborders
  publication-title: J. Virol.
– volume: 25
  start-page: 223
  year: 2012
  end-page: 263
  ident: bib0295
  article-title: Two years after pandemic influenza A/2009/H1N1: what have we learned?
  publication-title: Clin. Microbiol. Rev.
– volume: 11
  start-page: 444
  year: 2010
  ident: bib0085
  article-title: Chiropteran types I and II interferon genes inferred from genome sequencing traces by a statistical gene-family assembler
  publication-title: BMC Genomics
– volume: 85
  start-page: 2327
  year: 2004
  end-page: 2337
  ident: bib0140
  article-title: Influenza A viruses in feral Canadian ducks: extensive reassortment in nature
  publication-title: J. Gen. Virol.
– volume: 1
  start-page: e25
  year: 2012
  ident: bib0055
  article-title: Avian influenza A H5N1 virus: a continuous threat to humans
  publication-title: Emerg. Microbes Infect.
– volume: 162
  start-page: 944
  year: 2013
  end-page: 948
  ident: bib0290
  article-title: Failure to infect pigs co-housed with ducks or chickens infected experimentally with A/turkey/Turkey/1/2005 (H5N1) highly pathogenic avian influenza virus
  publication-title: Vet. Microbiol.
– volume: 175
  start-page: 6702
  year: 2005
  end-page: 6712
  ident: bib0195
  article-title: The MHC of the duck (
  publication-title: J. Immunol.
– volume: 344
  start-page: 480
  year: 2006
  end-page: 491
  ident: bib0310
  article-title: Genetic characterization of H5N1 influenza A viruses isolated from zoo tigers in Thailand
  publication-title: Virology
– volume: 8
  start-page: e1003059
  year: 2012
  ident: bib0530
  article-title: Species-specific inhibition of RIG-I ubiquitination and IFN induction by the influenza A virus NS1 protein
  publication-title: PLoS Pathog.
– volume: 82
  start-page: 4807
  year: 2008
  end-page: 4811
  ident: bib0345
  article-title: Homologous recombination is very rare or absent in human influenza A virus
  publication-title: J. Virol.
– volume: 71
  start-page: 6128
  year: 1997
  end-page: 6135
  ident: bib0130
  article-title: Coinfection of wild ducks by influenza A viruses: distribution patterns and biological significance
  publication-title: J. Virol.
– volume: 15
  start-page: 475
  year: 2009
  end-page: 478
  ident: bib0315
  article-title: Highly pathogenic avian influenza virus (H5N1) outbreak in captive wild birds and cats, Cambodia
  publication-title: Emerg. Infect. Dis.
– volume: 207
  start-page: 1743
  year: 2013
  end-page: 1752
  ident: bib0280
  article-title: Differential cell line susceptibility to the emerging novel human betacoronavirus 2C EMC/2012: implications on disease pathogenesis and clinical manifestation
  publication-title: J. Infect. Dis.
– volume: 65
  start-page: 477
  year: 2012
  end-page: 489
  ident: bib0025
  article-title: Is the discovery of the novel human betacoronavirus 2c EMC/2012 (HCoV-EMC) the beginning of another SARS-like pandemic?
  publication-title: J. Infect.
– volume: 351
  start-page: 180
  year: 2006
  end-page: 187
  ident: bib0215
  article-title: Molecular diversity of coronaviruses in bats
  publication-title: Virology
– volume: 91
  start-page: 2475
  year: 2012
  end-page: 2481
  ident: bib0445
  article-title: Molecular cloning, characterization, and expression analysis of the Muscovy duck Toll-like receptor 3 (MdTLR3) gene
  publication-title: Poult. Sci.
– volume: 102
  start-page: 7988
  year: 2005
  end-page: 7993
  ident: bib0270
  article-title: Human coronavirus NL63 employs the severe acute respiratory syndrome coronavirus receptor for cellular entry
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 84
  start-page: 2808
  year: 2010
  end-page: 2819
  ident: bib0105
  article-title: Ecoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related
  publication-title: J. Virol.
– volume: 30
  start-page: 101
  year: 2006
  end-page: 118
  ident: bib0475
  article-title: Antibodies, immunoglobulin genes and the bursa of Fabricius in chicken B cell development
  publication-title: Dev. Comp. Immunol.
– volume: 87
  start-page: 2455
  year: 2013
  end-page: 2462
  ident: bib0520
  article-title: Identification of novel influenza A virus proteins translated from PA mRNA
  publication-title: J. Virol.
– volume: 235
  start-page: 981
  year: 2010
  end-page: 988
  ident: bib0365
  article-title: D225G mutation in hemagglutinin of pandemic influenza H1N1 (2009) virus enhances virulence in mice
  publication-title: Exp. Biol. Med. (Maywood)
– volume: 106
  start-page: 18137
  year: 2009
  end-page: 18142
  ident: bib0395
  article-title: Glycans on influenza hemagglutinin affect receptor binding and immune response
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 35
  start-page: 421
  year: 2011
  end-page: 430
  ident: bib0465
  article-title: The little brown bat,
  publication-title: Dev. Comp. Immunol.
– volume: 5
  start-page: e13757
  year: 2010
  ident: bib0370
  article-title: Wild type and mutant 2009 pandemic influenza A (H1N1) viruses cause more severe disease and higher mortality in pregnant BALB/c mice
  publication-title: PLoS ONE
– volume: 25
  start-page: 467
  year: 2005
  end-page: 484
  ident: bib0455
  article-title: A genomic analysis of chicken cytokines and chemokines
  publication-title: J. Interferon Cytokine Res.
– volume: 186
  start-page: 3138
  year: 2011
  end-page: 3147
  ident: bib0090
  article-title: Type III IFNs in pteropid bats: differential expression patterns provide evidence for distinct roles in antiviral immunity
  publication-title: J. Immunol.
– volume: 86
  start-page: 705
  year: 2012
  end-page: 717
  ident: bib0170
  article-title: Chicken cells sense influenza A virus infection through MDA5 and CARDIF signaling involving LGP2
  publication-title: J. Virol.
– volume: 6
  start-page: e1001034
  year: 2010
  ident: bib0490
  article-title: Biological and structural characterization of a host-adapting amino acid in influenza virus
  publication-title: PLoS Pathog.
– volume: 26
  start-page: 107
  year: 2008
  end-page: 113
  ident: bib0375
  article-title: Glycan topology determines human adaptation of avian H5N1 virus hemagglutinin
  publication-title: Nat. Biotechnol.
– volume: 85
  start-page: 10598
  year: 2011
  end-page: 10604
  ident: bib0495
  article-title: Comparative analysis of avian influenza virus diversity in poultry and humans during a highly pathogenic avian influenza A (H7N7) virus outbreak
  publication-title: J. Virol.
– volume: 91
  start-page: 7782
  year: 1994
  end-page: 7786
  ident: bib0275
  article-title: 9-O-acetylated sialic acids have widespread but selective expression: analysis using a chimeric dual-function probe derived from influenza C hemagglutinin-esterase
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 1
  start-page: e35
  year: 2012
  ident: bib0035
  article-title: Genetic relatedness of the novel human group C betacoronavirus to Tylonycteris bat coronavirus HKU4 and Pipistrellus bat coronavirus HKU5
  publication-title: Emerg. Microbes Infect.
– volume: 72
  start-page: 217
  year: 2010
  end-page: 220
  ident: bib0075
  article-title: Molecular cloning and expression analysis of bat toll-like receptors 3, 7 and 9
  publication-title: J. Vet. Med. Sci.
– volume: 375
  start-page: 1100
  year: 2010
  end-page: 1108
  ident: bib0335
  article-title: Incidence of 2009 pandemic influenza A H1N1 infection in England: a cross-sectional serological study
  publication-title: Lancet
– volume: 19
  start-page: 531
  year: 2006
  end-page: 545
  ident: bib0065
  article-title: Bats: important reservoir hosts of emerging viruses
  publication-title: Clin. Microbiol. Rev.
– volume: 83
  start-page: 908
  year: 2009
  end-page: 917
  ident: bib0220
  article-title: Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus
  publication-title: J. Virol.
– volume: 86
  start-page: 3995
  year: 2012
  end-page: 4008
  ident: bib0225
  article-title: Discovery of seven novel mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses as the gene source of gammacoronavirus and deltacoronavirus
  publication-title: J. Virol.
– volume: 7
  start-page: e38665
  year: 2012
  ident: bib0010
  article-title: Evolutionary history and phylodynamics of influenza A and B neuraminidase (NA) genes inferred from large-scale sequence analyses
  publication-title: PLoS ONE
– volume: 2
  start-page: 156
  year: 2011
  ident: bib0485
  article-title: Differential use of importin-alpha isoforms governs cell tropism and host adaptation of influenza virus
  publication-title: Nat. Commun.
– volume: 112
  start-page: 372
  year: 2013
  end-page: 381
  ident: bib0040
  article-title: The emerging novel Middle East Respiratory Syndrome Coronavirus: the “knowns” and “unknowns”
  publication-title: J. Formos. Med. Assoc.
– volume: 35
  start-page: 273
  year: 2011
  end-page: 284
  ident: bib0480
  article-title: The two suborders of chiropterans have the canonical heavy-chain immunoglobulin (Ig) gene repertoire of eutherian mammals
  publication-title: Dev. Comp. Immunol.
– volume: 86
  start-page: 5481
  year: 2012
  end-page: 5496
  ident: bib0230
  article-title: Isolation and characterization of a novel Betacoronavirus subgroup A coronavirus, rabbit coronavirus HKU14, from domestic rabbits
  publication-title: J. Virol.
– volume: 3
  start-page: 802
  year: 2012
  ident: bib0535
  article-title: Adaptive mutations in NEP compensate for defective H5N1 RNA replication in cultured human cells
  publication-title: Nat. Commun.
– volume: 381
  start-page: 1916
  year: 2013
  end-page: 1925
  ident: bib0060
  article-title: Human infections with the emerging avian influenza A H7N9 virus from wet market poultry: clinical analysis and characterisation of viral genome
  publication-title: Lancet
– volume: 13
  start-page: 261
  year: 2012
  ident: bib0470
  article-title: The immune gene repertoire of an important viral reservoir, the Australian black flying fox
  publication-title: BMC Genomics
– volume: 197
  start-page: S29
  year: 2008
  end-page: S33
  ident: bib0190
  article-title: Ecology of avian influenza virus in birds
  publication-title: J. Infect. Dis.
– volume: 117
  start-page: 195
  year: 2007
  end-page: 206
  ident: bib0450
  article-title: Genomics of antiviral defenses in the cuk, a natural host of influenza and hepatitis B viruses
  publication-title: Cytogenet. Genome Res.
– volume: 86
  start-page: 8645
  year: 2012
  end-page: 8652
  ident: bib0400
  article-title: Structure and receptor complexes of the hemagglutinin from a highly pathogenic H7N7 influenza virus
  publication-title: J. Virol.
– volume: 107
  start-page: 5913
  year: 2010
  end-page: 5918
  ident: bib0165
  article-title: Association of RIG-I with innate immunity of ducks to influenza
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 45
  start-page: 2055
  year: 2008
  end-page: 2061
  ident: bib0175
  article-title: The duck toll like receptor 7: genomic organization, expression and function
  publication-title: Mol. Immunol.
– volume: 81
  start-page: 1574
  year: 2007
  end-page: 1585
  ident: bib0030
  article-title: Comparative analysis of twelve genomes of three novel group 2c and group 2d coronaviruses reveals unique group and subgroup features
  publication-title: J. Virol.
– volume: 102
  start-page: 14040
  year: 2005
  end-page: 14045
  ident: bib0020
  article-title: Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 86
  start-page: 727
  year: 2005
  end-page: 731
  ident: bib0340
  article-title: Intersegmental recombination between the haemagglutinin and matrix genes was responsible for the emergence of a highly pathogenic H7N3 avian influenza virus in British Columbia
  publication-title: J. Gen. Virol.
– volume: 86
  start-page: 584
  year: 2012
  end-page: 588
  ident: bib0415
  article-title: Length variations in the NA Stalk of an H7N1 influenza virus have opposite effects on viral excretion in chickens and ducks
  publication-title: J. Virol.
– volume: 60
  start-page: 395
  year: 2013
  end-page: 402
  ident: bib0180
  article-title: Consecutive natural influenza A virus infections in sentinel mallards in the evident absence of subtype-specific hemagglutination inhibiting antibodies
  publication-title: Transbound. Emerg. Dis.
– volume: 86
  start-page: 1411
  year: 2012
  end-page: 1420
  ident: bib0355
  article-title: Adaptation of a duck influenza A virus in quail
  publication-title: J. Virol.
– volume: 12
  start-page: 7
  year: 2011
  end-page: 13
  ident: bib0390
  article-title: Expression patterns of influenza virus receptors in the respiratory tracts of four species of poultry
  publication-title: J. Vet. Sci.
– volume: 64
  start-page: 3297
  year: 1990
  end-page: 3303
  ident: bib0405
  article-title: Generation of seal influenza-virus variants pathogenic for chickens, because of hemagglutinin cleavage site changes
  publication-title: J. Virol.
– volume: 7
  start-page: 132
  year: 2007
  ident: bib0135
  article-title: A model to control the epidemic of H5N1 influenza at the source
  publication-title: BMC Infect. Dis.
– volume: 94
  start-page: 1028
  year: 2013
  end-page: 1038
  ident: bib0250
  article-title: Coronaviruses in bats from Mexico
  publication-title: J. Gen. Virol.
– volume: 35
  start-page: 1008
  year: 2011
  end-page: 1016
  ident: bib0185
  article-title: Immunoglobulin genetics and antibody responses to influenza in ducks
  publication-title: Dev. Comp. Immunol.
– volume: 92
  start-page: 534
  year: 2011
  end-page: 543
  ident: bib0440
  article-title: Immune response in the duck intestine following infection with low-pathogenic avian influenza viruses or stimulation with a Toll-like receptor 7 agonist administered orally
  publication-title: J. Gen. Virol.
– volume: 60
  start-page: 104
  year: 2013
  end-page: 116
  ident: bib0070
  article-title: Antiviral immune responses of bats: a review
  publication-title: Zoonoses Public Health
– volume: 62
  start-page: 173
  year: 2010
  end-page: 184
  ident: bib0100
  article-title: Immunoglobulin heavy chain diversity in Pteropid bats: evidence for a diverse and highly specific antigen binding repertoire
  publication-title: Immunogenetics
– volume: 17
  start-page: 67
  year: 2007
  end-page: 91
  ident: bib0045
  article-title: Bats as a continuing source of emerging infections in humans
  publication-title: Rev. Med. Virol.
– volume: 312
  start-page: 384
  year: 2006
  end-page: 388
  ident: bib0120
  article-title: Global patterns of influenza a virus in wild birds
  publication-title: Science
– volume: 3
  year: 2012
  ident: bib0265
  article-title: Human coronavirus EMC does not require the SARS-coronavirus receptor and maintains broad replicative capability in mammalian cell lines
  publication-title: mBio
– volume: 84
  start-page: 10051
  year: 2010
  end-page: 10062
  ident: bib0505
  article-title: Differential localization and function of PB1-F2 derived from different strains of influenza A virus
  publication-title: J. Virol.
– volume: 28
  start-page: 445
  year: 2008
  end-page: 454
  ident: bib0460
  article-title: Molecular cloning and characterization of chicken interferon-gamma receptor alpha-chain
  publication-title: J. Interferon Cytokine Res.
– volume: 18
  start-page: 834
  year: 2012
  end-page: 837
  ident: bib0300
  article-title: Human infections with novel reassortant influenza A(H3N2)v viruses, United States, 2011
  publication-title: Emerg. Infect. Dis.
– volume: 339
  start-page: 456
  year: 2013
  end-page: 460
  ident: bib0425
  article-title: Comparative analysis of bat genomes provides insight into the evolution of flight and immunity
  publication-title: Science
– volume: 86
  start-page: 12411
  year: 2012
  end-page: 12413
  ident: bib0515
  article-title: Evolutionary conservation of the PA-X open reading frame in segment 3 of influenza A virus
  publication-title: J. Virol.
– volume: 48
  start-page: 1950
  year: 2011
  end-page: 1957
  ident: bib0150
  article-title: Expression of duck CCL19 and CCL21 and CCR7 receptor in lymphoid and influenza-infected tissues
  publication-title: Mol. Immunol.
– volume: 102
  start-page: 10682
  year: 2005
  end-page: 10687
  ident: bib0200
  article-title: Role of domestic ducks in the propagation and biological evolution of highly pathogenic H5N1 influenza viruses in Asia
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 88
  start-page: 536
  year: 2007
  end-page: 546
  ident: bib0510
  article-title: Prevalence of PB1-F2 of influenza A viruses
  publication-title: J. Gen. Virol.
– volume: 110
  start-page: 1458
  year: 2013
  end-page: 1463
  ident: bib0110
  article-title: Hemagglutinin homologue from H17N10 bat influenza virus exhibits divergent receptor-binding and pH-dependent fusion activities
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
– volume: 360
  start-page: 2616
  year: 2009
  end-page: 2625
  ident: bib0305
  article-title: Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009
  publication-title: N. Engl. J. Med.
– volume: 234
  start-page: 1117
  year: 2009
  end-page: 1127
  ident: bib0205
  article-title: Coronavirus diversity, phylogeny and interspecies jumping
  publication-title: Exp. Biol. Med. (Maywood)
– volume: 56
  start-page: 152
  year: 1992
  end-page: 179
  ident: bib0125
  article-title: Evolution and ecology of influenza A viruses
  publication-title: Microbiol. Rev.
– volume: 86
  start-page: 1750
  year: 2012
  end-page: 1757
  ident: bib0500
  article-title: Reassortment and mutation of the avian influenza virus polymerase PA subunit overcome species barriers
  publication-title: J. Virol.
– volume: 5
  start-page: e13757
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0370
  article-title: Wild type and mutant 2009 pandemic influenza A (H1N1) viruses cause more severe disease and higher mortality in pregnant BALB/c mice
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0013757
– volume: 175
  start-page: 6702
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0195
  article-title: The MHC of the duck (Anas platyrhynchos) contains five differentially expressed class I genes
  publication-title: J. Immunol.
  doi: 10.4049/jimmunol.175.10.6702
– volume: 15
  start-page: 475
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0315
  article-title: Highly pathogenic avian influenza virus (H5N1) outbreak in captive wild birds and cats, Cambodia
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1503.081410
– volume: 86
  start-page: 1750
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0500
  article-title: Reassortment and mutation of the avian influenza virus polymerase PA subunit overcome species barriers
  publication-title: J. Virol.
  doi: 10.1128/JVI.06203-11
– volume: 94
  start-page: 118
  year: 1992
  ident: 10.1016/j.tim.2013.05.005_bib0005
  article-title: Dynamics of trade in the ancient mesopotamian “World System”
  publication-title: Am. Anthropol. New Ser.
  doi: 10.1525/aa.1992.94.1.02a00070
– volume: 381
  start-page: 1916
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0060
  article-title: Human infections with the emerging avian influenza A H7N9 virus from wet market poultry: clinical analysis and characterisation of viral genome
  publication-title: Lancet
  doi: 10.1016/S0140-6736(13)60903-4
– volume: 72
  start-page: 217
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0075
  article-title: Molecular cloning and expression analysis of bat toll-like receptors 3, 7 and 9
  publication-title: J. Vet. Med. Sci.
  doi: 10.1292/jvms.09-0050
– volume: 20
  start-page: 660
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0015
  article-title: Severe acute respiratory syndrome coronavirus as an agent of emerging and reemerging infection
  publication-title: Clin. Microbiol. Rev.
  doi: 10.1128/CMR.00023-07
– volume: 84
  start-page: 10051
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0505
  article-title: Differential localization and function of PB1-F2 derived from different strains of influenza A virus
  publication-title: J. Virol.
  doi: 10.1128/JVI.00592-10
– volume: 35
  start-page: 1008
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0185
  article-title: Immunoglobulin genetics and antibody responses to influenza in ducks
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2011.02.011
– volume: 495
  start-page: 251
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0285
  article-title: Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC
  publication-title: Nature
  doi: 10.1038/nature12005
– volume: 375
  start-page: 1100
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0335
  article-title: Incidence of 2009 pandemic influenza A H1N1 infection in England: a cross-sectional serological study
  publication-title: Lancet
  doi: 10.1016/S0140-6736(09)62126-7
– volume: 186
  start-page: 3138
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0090
  article-title: Type III IFNs in pteropid bats: differential expression patterns provide evidence for distinct roles in antiviral immunity
  publication-title: J. Immunol.
  doi: 10.4049/jimmunol.1003115
– volume: 36
  start-page: 657
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0080
  article-title: Molecular characterisation of RIG-I-like helicases in the black flying fox, Pteropus alecto
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2011.11.008
– volume: 86
  start-page: 705
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0170
  article-title: Chicken cells sense influenza A virus infection through MDA5 and CARDIF signaling involving LGP2
  publication-title: J. Virol.
  doi: 10.1128/JVI.00742-11
– volume: 35
  start-page: 421
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0465
  article-title: The little brown bat, M. lucifugus, displays a highly diverse V H, D H and J H repertoire but little evidence of somatic hypermutation
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2010.06.004
– volume: 234
  start-page: 1117
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0205
  article-title: Coronavirus diversity, phylogeny and interspecies jumping
  publication-title: Exp. Biol. Med. (Maywood)
  doi: 10.3181/0903-MR-94
– volume: 1
  start-page: e35
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0035
  article-title: Genetic relatedness of the novel human group C betacoronavirus to Tylonycteris bat coronavirus HKU4 and Pipistrellus bat coronavirus HKU5
  publication-title: Emerg. Microbes Infect.
  doi: 10.1038/emi.2012.45
– volume: 351
  start-page: 180
  year: 2006
  ident: 10.1016/j.tim.2013.05.005_bib0215
  article-title: Molecular diversity of coronaviruses in bats
  publication-title: Virology
  doi: 10.1016/j.virol.2006.02.041
– volume: 86
  start-page: 1411
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0355
  article-title: Adaptation of a duck influenza A virus in quail
  publication-title: J. Virol.
  doi: 10.1128/JVI.06100-11
– volume: 60
  start-page: 395
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0180
  article-title: Consecutive natural influenza A virus infections in sentinel mallards in the evident absence of subtype-specific hemagglutination inhibiting antibodies
  publication-title: Transbound. Emerg. Dis.
  doi: 10.1111/j.1865-1682.2012.01357.x
– volume: 87
  start-page: 2455
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0520
  article-title: Identification of novel influenza A virus proteins translated from PA mRNA
  publication-title: J. Virol.
  doi: 10.1128/JVI.02656-12
– volume: 110
  start-page: 1458
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0110
  article-title: Hemagglutinin homologue from H17N10 bat influenza virus exhibits divergent receptor-binding and pH-dependent fusion activities
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1218509110
– volume: 109
  start-page: 18903
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0115
  article-title: Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1212579109
– volume: 1
  start-page: e25
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0055
  article-title: Avian influenza A H5N1 virus: a continuous threat to humans
  publication-title: Emerg. Microbes Infect.
  doi: 10.1038/emi.2012.24
– volume: 62
  start-page: 173
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0100
  article-title: Immunoglobulin heavy chain diversity in Pteropid bats: evidence for a diverse and highly specific antigen binding repertoire
  publication-title: Immunogenetics
  doi: 10.1007/s00251-010-0425-4
– volume: 112
  start-page: 372
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0040
  article-title: The emerging novel Middle East Respiratory Syndrome Coronavirus: the “knowns” and “unknowns”
  publication-title: J. Formos. Med. Assoc.
  doi: 10.1016/j.jfma.2013.05.010
– volume: 56
  start-page: 152
  year: 1992
  ident: 10.1016/j.tim.2013.05.005_bib0125
  article-title: Evolution and ecology of influenza A viruses
  publication-title: Microbiol. Rev.
  doi: 10.1128/MMBR.56.1.152-179.1992
– volume: 45
  start-page: 2055
  year: 2008
  ident: 10.1016/j.tim.2013.05.005_bib0175
  article-title: The duck toll like receptor 7: genomic organization, expression and function
  publication-title: Mol. Immunol.
  doi: 10.1016/j.molimm.2007.10.018
– volume: 17
  start-page: 67
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0045
  article-title: Bats as a continuing source of emerging infections in humans
  publication-title: Rev. Med. Virol.
  doi: 10.1002/rmv.520
– volume: 89
  start-page: 27
  issue: Suppl. 1
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0320
  article-title: Infection of dogs with equine influenza virus: evidence for transmission from horses during the Australian outbreak
  publication-title: Aust. Vet. J.
  doi: 10.1111/j.1751-0813.2011.00734.x
– volume: 64
  start-page: 3297
  year: 1990
  ident: 10.1016/j.tim.2013.05.005_bib0405
  article-title: Generation of seal influenza-virus variants pathogenic for chickens, because of hemagglutinin cleavage site changes
  publication-title: J. Virol.
  doi: 10.1128/JVI.64.7.3297-3303.1990
– volume: 109
  start-page: 4269
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0050
  article-title: A distinct lineage of influenza A virus from bats
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1116200109
– volume: 92
  start-page: 534
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0440
  article-title: Immune response in the duck intestine following infection with low-pathogenic avian influenza viruses or stimulation with a Toll-like receptor 7 agonist administered orally
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.026443-0
– volume: 102
  start-page: 10682
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0200
  article-title: Role of domestic ducks in the propagation and biological evolution of highly pathogenic H5N1 influenza viruses in Asia
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.0504662102
– volume: 2
  start-page: 156
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0485
  article-title: Differential use of importin-alpha isoforms governs cell tropism and host adaptation of influenza virus
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1158
– volume: 35
  start-page: 273
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0480
  article-title: The two suborders of chiropterans have the canonical heavy-chain immunoglobulin (Ig) gene repertoire of eutherian mammals
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2010.08.011
– volume: 8
  start-page: e1002730
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0350
  article-title: Evolution of an Eurasian avian-like influenza virus in naive and vaccinated pigs
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1002730
– volume: 3
  start-page: 143
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0360
  article-title: Differences in influenza virus receptors in chickens and ducks: Implications for interspecies transmission
  publication-title: J. Mol. Genet. Med.
  doi: 10.4172/1747-0862.1000026
– volume: 81
  start-page: 1574
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0030
  article-title: Comparative analysis of twelve genomes of three novel group 2c and group 2d coronaviruses reveals unique group and subgroup features
  publication-title: J. Virol.
  doi: 10.1128/JVI.02182-06
– volume: 71
  start-page: 6128
  year: 1997
  ident: 10.1016/j.tim.2013.05.005_bib0130
  article-title: Coinfection of wild ducks by influenza A viruses: distribution patterns and biological significance
  publication-title: J. Virol.
  doi: 10.1128/JVI.71.8.6128-6135.1997
– volume: 19
  start-page: 531
  year: 2006
  ident: 10.1016/j.tim.2013.05.005_bib0065
  article-title: Bats: important reservoir hosts of emerging viruses
  publication-title: Clin. Microbiol. Rev.
  doi: 10.1128/CMR.00017-06
– volume: 86
  start-page: 727
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0340
  article-title: Intersegmental recombination between the haemagglutinin and matrix genes was responsible for the emergence of a highly pathogenic H7N3 avian influenza virus in British Columbia
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.80478-0
– volume: 85
  start-page: 8133
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0525
  article-title: The viral nucleoprotein determines Mx sensitivity of influenza A viruses
  publication-title: J. Virol.
  doi: 10.1128/JVI.00712-11
– volume: 28
  start-page: 445
  year: 2008
  ident: 10.1016/j.tim.2013.05.005_bib0460
  article-title: Molecular cloning and characterization of chicken interferon-gamma receptor alpha-chain
  publication-title: J. Interferon Cytokine Res.
  doi: 10.1089/jir.2007.0135
– volume: 3
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0325
  article-title: Emergence of fatal avian influenza in New England harbor seals
  publication-title: mBio
  doi: 10.1128/mBio.00166-12
– volume: 72
  start-page: 7367
  year: 1998
  ident: 10.1016/j.tim.2013.05.005_bib0380
  article-title: Molecular basis for the generation in pigs of influenza A viruses with pandemic potential
  publication-title: J. Virol.
  doi: 10.1128/JVI.72.9.7367-7373.1998
– volume: 339
  start-page: 456
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0425
  article-title: Comparative analysis of bat genomes provides insight into the evolution of flight and immunity
  publication-title: Science
  doi: 10.1126/science.1230835
– volume: 84
  start-page: 2808
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0105
  article-title: Ecoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related Rhinolophus bat coronavirus in China reveal bats as a reservoir for acute, self-limiting infection that allows recombination events
  publication-title: J. Virol.
  doi: 10.1128/JVI.02219-09
– volume: 11
  start-page: 444
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0085
  article-title: Chiropteran types I and II interferon genes inferred from genome sequencing traces by a statistical gene-family assembler
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-11-444
– volume: 25
  start-page: 223
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0295
  article-title: Two years after pandemic influenza A/2009/H1N1: what have we learned?
  publication-title: Clin. Microbiol. Rev.
  doi: 10.1128/CMR.05012-11
– volume: 7
  start-page: e38665
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0010
  article-title: Evolutionary history and phylodynamics of influenza A and B neuraminidase (NA) genes inferred from large-scale sequence analyses
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0038665
– volume: 48
  start-page: 924
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0160
  article-title: Immune-related gene expression in response to H5N1 avian influenza virus infection in chicken and duck embryonic fibroblasts
  publication-title: Mol. Immunol.
  doi: 10.1016/j.molimm.2010.12.011
– volume: 91
  start-page: 7782
  year: 1994
  ident: 10.1016/j.tim.2013.05.005_bib0275
  article-title: 9-O-acetylated sialic acids have widespread but selective expression: analysis using a chimeric dual-function probe derived from influenza C hemagglutinin-esterase
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.91.16.7782
– volume: 60
  start-page: 104
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0070
  article-title: Antiviral immune responses of bats: a review
  publication-title: Zoonoses Public Health
  doi: 10.1111/j.1863-2378.2012.01528.x
– volume: 197
  start-page: S29
  issue: Suppl. 1
  year: 2008
  ident: 10.1016/j.tim.2013.05.005_bib0190
  article-title: Ecology of avian influenza virus in birds
  publication-title: J. Infect. Dis.
  doi: 10.1086/524991
– volume: 83
  start-page: 908
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0220
  article-title: Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus
  publication-title: J. Virol.
  doi: 10.1128/JVI.01977-08
– volume: 88
  start-page: 536
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0510
  article-title: Prevalence of PB1-F2 of influenza A viruses
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.82378-0
– volume: 344
  start-page: 480
  year: 2006
  ident: 10.1016/j.tim.2013.05.005_bib0310
  article-title: Genetic characterization of H5N1 influenza A viruses isolated from zoo tigers in Thailand
  publication-title: Virology
  doi: 10.1016/j.virol.2005.08.032
– volume: 82
  start-page: 4807
  year: 2008
  ident: 10.1016/j.tim.2013.05.005_bib0345
  article-title: Homologous recombination is very rare or absent in human influenza A virus
  publication-title: J. Virol.
  doi: 10.1128/JVI.02683-07
– volume: 7
  start-page: 393
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0385
  article-title: The infectivity of pandemic 2009 H1N1 and avian influenza viruses for pigs: an assessment by ex vivo respiratory tract organ culture
  publication-title: Influenza Other Respir. Viruses
  doi: 10.1111/j.1750-2659.2012.00397.x
– volume: 25
  start-page: 467
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0455
  article-title: A genomic analysis of chicken cytokines and chemokines
  publication-title: J. Interferon Cytokine Res.
  doi: 10.1089/jir.2005.25.467
– volume: 7
  start-page: 132
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0135
  article-title: A model to control the epidemic of H5N1 influenza at the source
  publication-title: BMC Infect. Dis.
  doi: 10.1186/1471-2334-7-132
– volume: 186
  start-page: 5397
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0430
  article-title: Characterization of chicken Mda5 activity: regulation of IFN-beta in the absence of RIG-I functionality
  publication-title: J. Immunol.
  doi: 10.4049/jimmunol.1003712
– volume: 102
  start-page: 14040
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0020
  article-title: Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.0506735102
– volume: 87
  start-page: 2963
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0420
  article-title: Amino acid 316 of hemagglutinin and the neuraminidase stalk length influence virulence of H9N2 influenza virus in chickens and mice
  publication-title: J. Virol.
  doi: 10.1128/JVI.02688-12
– volume: 86
  start-page: 584
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0415
  article-title: Length variations in the NA Stalk of an H7N1 influenza virus have opposite effects on viral excretion in chickens and ducks
  publication-title: J. Virol.
  doi: 10.1128/JVI.05474-11
– volume: 102
  start-page: 7988
  year: 2005
  ident: 10.1016/j.tim.2013.05.005_bib0270
  article-title: Human coronavirus NL63 employs the severe acute respiratory syndrome coronavirus receptor for cellular entry
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.0409465102
– volume: 13
  start-page: 261
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0470
  article-title: The immune gene repertoire of an important viral reservoir, the Australian black flying fox
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-13-261
– volume: 86
  start-page: 12411
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0515
  article-title: Evolutionary conservation of the PA-X open reading frame in segment 3 of influenza A virus
  publication-title: J. Virol.
  doi: 10.1128/JVI.01677-12
– volume: 162
  start-page: 944
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0290
  article-title: Failure to infect pigs co-housed with ducks or chickens infected experimentally with A/turkey/Turkey/1/2005 (H5N1) highly pathogenic avian influenza virus
  publication-title: Vet. Microbiol.
  doi: 10.1016/j.vetmic.2012.11.040
– volume: 6
  start-page: e25385
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0095
  article-title: Type III IFN receptor expression and functional characterisation in the pteropid bat, Pteropus alecto
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0025385
– volume: 26
  start-page: 107
  year: 2008
  ident: 10.1016/j.tim.2013.05.005_bib0375
  article-title: Glycan topology determines human adaptation of avian H5N1 virus hemagglutinin
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt1375
– volume: 6
  start-page: e1001034
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0490
  article-title: Biological and structural characterization of a host-adapting amino acid in influenza virus
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1001034
– volume: 1
  start-page: 624
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0210
  article-title: SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission
  publication-title: Curr. Opin. Virol.
  doi: 10.1016/j.coviro.2011.10.012
– volume: 3
  start-page: 802
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0535
  article-title: Adaptive mutations in NEP compensate for defective H5N1 RNA replication in cultured human cells
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1804
– volume: 86
  start-page: 11906
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0245
  article-title: Recent transmission of a novel alphacoronavirus, bat coronavirus HKU10, from Leschenault's rousettes to pomona leaf-nosed bats: first evidence of interspecies transmission of coronavirus between bats of different suborders
  publication-title: J. Virol.
  doi: 10.1128/JVI.01305-12
– volume: 12
  start-page: 7
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0390
  article-title: Expression patterns of influenza virus receptors in the respiratory tracts of four species of poultry
  publication-title: J. Vet. Sci.
  doi: 10.4142/jvs.2011.12.1.7
– volume: 86
  start-page: 3995
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0225
  publication-title: J. Virol.
  doi: 10.1128/JVI.06540-11
– volume: 65
  start-page: 477
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0025
  article-title: Is the discovery of the novel human betacoronavirus 2c EMC/2012 (HCoV-EMC) the beginning of another SARS-like pandemic?
  publication-title: J. Infect.
  doi: 10.1016/j.jinf.2012.10.002
– volume: 312
  start-page: 384
  year: 2006
  ident: 10.1016/j.tim.2013.05.005_bib0120
  article-title: Global patterns of influenza a virus in wild birds
  publication-title: Science
  doi: 10.1126/science.1122438
– volume: 48
  start-page: 1950
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0150
  article-title: Expression of duck CCL19 and CCL21 and CCR7 receptor in lymphoid and influenza-infected tissues
  publication-title: Mol. Immunol.
  doi: 10.1016/j.molimm.2011.05.025
– volume: 18
  start-page: 834
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0300
  article-title: Human infections with novel reassortant influenza A(H3N2)v viruses, United States, 2011
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1805.111922
– volume: 207
  start-page: 1743
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0280
  article-title: Differential cell line susceptibility to the emerging novel human betacoronavirus 2C EMC/2012: implications on disease pathogenesis and clinical manifestation
  publication-title: J. Infect. Dis.
  doi: 10.1093/infdis/jit123
– volume: 19
  start-page: 456
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0255
  article-title: Human betacoronavirus 2c EMC/2012-related viruses in bats, Ghana and Europe
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1903.121503
– volume: 91
  start-page: 2475
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0445
  article-title: Molecular cloning, characterization, and expression analysis of the Muscovy duck Toll-like receptor 3 (MdTLR3) gene
  publication-title: Poult. Sci.
  doi: 10.3382/ps.2012-02394
– volume: 51
  start-page: 316
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0145
  article-title: Avian influenza rapidly induces antiviral genes in duck lung and intestine
  publication-title: Mol. Immunol.
  doi: 10.1016/j.molimm.2012.03.034
– volume: 85
  start-page: 10598
  year: 2011
  ident: 10.1016/j.tim.2013.05.005_bib0495
  article-title: Comparative analysis of avian influenza virus diversity in poultry and humans during a highly pathogenic avian influenza A (H7N7) virus outbreak
  publication-title: J. Virol.
  doi: 10.1128/JVI.05369-11
– volume: 85
  start-page: 2327
  year: 2004
  ident: 10.1016/j.tim.2013.05.005_bib0140
  article-title: Influenza A viruses in feral Canadian ducks: extensive reassortment in nature
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.79878-0
– volume: 30
  start-page: 101
  year: 2006
  ident: 10.1016/j.tim.2013.05.005_bib0475
  article-title: Antibodies, immunoglobulin genes and the bursa of Fabricius in chicken B cell development
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2005.06.018
– volume: 235
  start-page: 981
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0365
  article-title: D225G mutation in hemagglutinin of pandemic influenza H1N1 (2009) virus enhances virulence in mice
  publication-title: Exp. Biol. Med. (Maywood)
  doi: 10.1258/ebm.2010.010071
– volume: 184
  start-page: 6993
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0435
  article-title: The differential evolutionary dynamics of avian cytokine and TLR gene classes
  publication-title: J. Immunol.
  doi: 10.4049/jimmunol.0903092
– volume: 360
  start-page: 2616
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0305
  article-title: Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009
  publication-title: N. Engl. J. Med.
  doi: 10.1056/NEJMoa0903812
– volume: 107
  start-page: 5913
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0165
  article-title: Association of RIG-I with innate immunity of ducks to influenza
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1001755107
– volume: 86
  start-page: 5481
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0230
  article-title: Isolation and characterization of a novel Betacoronavirus subgroup A coronavirus, rabbit coronavirus HKU14, from domestic rabbits
  publication-title: J. Virol.
  doi: 10.1128/JVI.06927-11
– volume: 8
  start-page: e1003059
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0530
  article-title: Species-specific inhibition of RIG-I ubiquitination and IFN induction by the influenza A virus NS1 protein
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1003059
– volume: 41
  start-page: 519
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0155
  article-title: Differential innate responses of chickens and ducks to low-pathogenic avian influenza
  publication-title: Avian Pathol.
  doi: 10.1080/03079457.2012.732691
– volume: 106
  start-page: 18137
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0395
  article-title: Glycans on influenza hemagglutinin affect receptor binding and immune response
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.0909696106
– volume: 86
  start-page: 8645
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0400
  article-title: Structure and receptor complexes of the hemagglutinin from a highly pathogenic H7N7 influenza virus
  publication-title: J. Virol.
  doi: 10.1128/JVI.00281-12
– volume: 109
  start-page: 2573
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0330
  article-title: Hemagglutinin stalk antibodies elicited by the 2009 pandemic influenza virus as a mechanism for the extinction of seasonal H1N1 viruses
  publication-title: Proc. Natl. Acad. Sci. U.S.A.
  doi: 10.1073/pnas.1200039109
– volume: 117
  start-page: 195
  year: 2007
  ident: 10.1016/j.tim.2013.05.005_bib0450
  article-title: Genomics of antiviral defenses in the cuk, a natural host of influenza and hepatitis B viruses
  publication-title: Cytogenet. Genome Res.
  doi: 10.1159/000103180
– volume: 15
  start-page: 1377
  year: 2009
  ident: 10.1016/j.tim.2013.05.005_bib0240
  article-title: Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats, Ghana
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1509.090224
– volume: 94
  start-page: 1028
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0250
  article-title: Coronaviruses in bats from Mexico
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.049759-0
– volume: 3
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0265
  article-title: Human coronavirus EMC does not require the SARS-coronavirus receptor and maintains broad replicative capability in mammalian cell lines
  publication-title: mBio
  doi: 10.1128/mBio.00515-12
– volume: 66
  start-page: 464
  year: 2013
  ident: 10.1016/j.tim.2013.05.005_bib0260
  article-title: A predicted receptor-binding and critical neutralizing domain in S protein of the novel human coronavirus HCoV-EMC
  publication-title: J. Infect.
  doi: 10.1016/j.jinf.2012.12.003
– volume: 50
  start-page: 2881
  year: 2012
  ident: 10.1016/j.tim.2013.05.005_bib0410
  article-title: Field monitoring of avian influenza viruses: whole-genome sequencing and tracking of neuraminidase evolution using 454 pyrosequencing
  publication-title: J. Clin. Microbiol.
  doi: 10.1128/JCM.01142-12
– volume: 84
  start-page: 3134
  year: 2010
  ident: 10.1016/j.tim.2013.05.005_bib0235
  article-title: Recombination, reservoirs, and the modular spike: mechanisms of coronavirus cross-species transmission
  publication-title: J. Virol.
  doi: 10.1128/JVI.01394-09
SSID ssj0005525
Score 2.5843885
SecondaryResourceType review_article
Snippet •Bats and birds are reservoirs of zoonotic viruses.•Their unique immune systems allow them to harbor a large variety of viruses.•Coronaviruses and influenza...
Highlights • Bats and birds are reservoirs of zoonotic viruses. • Their unique immune systems allow them to harbor a large variety of viruses. • Coronaviruses...
As exemplified by coronaviruses and influenza viruses, bats and birds are natural reservoirs for providing viral genes during evolution of new virus species...
• Bats and birds are reservoirs of zoonotic viruses. • Their unique immune systems allow them to harbor a large variety of viruses. • Coronaviruses and...
SourceID pubmedcentral
proquest
pubmed
crossref
fao
elsevier
SourceType Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 544
SubjectTerms adaptive immunity
Animals
biodiversity
birds
Birds - virology
Chiroptera
Chiroptera - virology
coronavirus
Coronavirus - growth & development
Coronavirus Infections - transmission
Coronavirus Infections - virology
Disease Reservoirs - virology
disease transmission
Disease Vectors
emerging infectious disease
evolution
farms
genes
Humans
influenza
Influenza A virus
Influenza in Birds - transmission
Influenza in Birds - virology
Influenza, Human - transmission
Influenza, Human - virology
Internal Medicine
markets
migratory behavior
mixing
mutants
Orthomyxoviridae - growth & development
RNA
RNA virus
roosting behavior
virus evolution
viruses
wildlife
wildlife habitats
Zoonoses - transmission
Zoonoses - virology
Title Interspecies transmission and emergence of novel viruses: lessons from bats and birds
URI https://www.clinicalkey.com/#!/content/1-s2.0-S0966842X13000899
https://www.clinicalkey.es/playcontent/1-s2.0-S0966842X13000899
https://dx.doi.org/10.1016/j.tim.2013.05.005
https://www.ncbi.nlm.nih.gov/pubmed/23770275
https://www.proquest.com/docview/1443401849
https://www.proquest.com/docview/1803101396
https://pubmed.ncbi.nlm.nih.gov/PMC7126491
Volume 21
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnR1da9swUHQdg72UfTdbVzTY08CLbMuW3bdSVrKF9WFdWN6ErI_NJdgldgp76W_vnWyHZgsZ7MnEuZOl0-nupPsQIe8zHeWuSFgQaiYC7jisOadMwI11eeFMxvzRxdeLdDLjX-bJfI-cDbkwGFbZy_5Opntp3b8Z99QcX5fl-BJaQSfSHB0y6LzCDHYukMs_3t4L80j8xasIHCD04Nn0MV5ticnoYeyLd-INdtt10wOn6m0W6J-BlPc00_kTctCblPS06_VTsmerZ-RRd8nk7-dk5g_9MKMSNsW0Rd0Ec4uHZFRVhto-_9LS2tGqvrELelMuV41tTugCxCBwJcUcFFqotvEYRbk0zQsyO__0_WwS9JcpBDoVeRs4hWN22pmYJwUsZFvwiNmc8TDLYV-iozC1YA6qMDNpHMc6MZbpnGmVYVU4Fb8k-1Vd2UNCs8QIzjLOtYA2hFAG9kWg55LCpgVYCCPCBjJK3VcaxwsvFnIIKbuSQHmJlJcskUD5EfmwRrnuymzsAo6GuZFD_ihIPAlKYBeS2IZkm37NNjKUTSSZ_IuvRoSvMTdY818fPAS2keonCGs5u4ywlB8W0ItSaPHdwEsSZhxdNKqy9Qr6wHkMO96M74LJsJwrTFU6Iq86_lvTLIqFQEc0jHaDM9cAWE1885-q_OWrigvoGc_D1_832jfkMf7qwhyPyH67XNm3YK61xbFfj8fk4enn6eQCn9NvP6Z37hQ-PA
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9swDBbaFMN2GfZu9tSAnQYYkW3JsncrihXp2ubSBshNkPXYPAR2ETsF9u9H-pEtW5ABu8aiIlEUKYnkR0I-pCbKfC5YEBomA-457DmvbcCt81nubcrap4urWTKd8y8LsTggp0MuDIZV9rq_0-mttu5_mfTcnNwWxeQaekEn0gIdMui8OiRHiE4lRuTo5PxiOvsV6SHa2qvYPkCCwbnZhnk1Beajh3GL34lF7Habp0Ovq12H0D9jKX8zTmePyMP-VElPuoE_JgeufELudXUmfzwl8_bdD5Mq4V5MGzRPsLz4TkZ1aanrUzAdrTwtqzu3pHfFal27-hNdgiYEwaSYhkJz3dQtRV6sbP2MzM8-35xOg76eQmASmTWB1zhnb7yNuchhL7ucR8xljIdpBlcTE4WJgxOhDlObxHFshHXMZMzoFIHhdPycjMqqdMeEpsJKzlLOjYQ-pNQWrkZg6kTukhwOCWPCBjYq04ONY82LpRqiyr4r4LxCzismFHB-TD5uSG47pI19jaNhbdSQQgpKT4Ed2EckdxG5ut-2tQpVHSmm_hKtMeEbyi3p_NcfHoPYKP0V9LWaX0eI5ocYelECPb4fZEnBiqOXRpeuWsMYOI_h0pvyfW1SRHSFpUrG5EUnfxueRbGU6IuG2W5J5qYBAopvfymLby2wuISR8Sx8-X-zfUfuT2-uLtXl-eziFXmAX7qox9dk1KzW7g2c3pr8bb87fwLDrz9K
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Interspecies+transmission+and+emergence+of+novel+viruses%3A+lessons+from+bats+and+birds&rft.jtitle=Trends+in+microbiology+%28Regular+ed.%29&rft.au=Chan%2C+Jasper+Fuk-Woo&rft.au=To%2C+Kelvin+Kai-Wang&rft.au=Tse%2C+Herman&rft.au=Jin%2C+Dong-Yan&rft.date=2013-10-01&rft.pub=Elsevier+Ltd&rft.issn=0966-842X&rft.volume=21&rft.issue=10&rft.spage=544&rft.epage=555&rft_id=info:doi/10.1016%2Fj.tim.2013.05.005&rft.externalDocID=US201600121269
thumbnail_m http://utb.summon.serialssolutions.com/2.0.0/image/custom?url=https%3A%2F%2Fcdn.clinicalkey.com%2Fck-thumbnails%2F0966842X%2FS0966842X13X00095%2Fcov150h.gif