Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics

The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facili...

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Published inHuman mutation Vol. 31; no. 6; pp. 631 - 655
Main Authors Cooper, David N, Chen, Jian-Min, Ball, Edward V, Howells, Katy, Mort, Matthew, Phillips, Andrew D, Chuzhanova, Nadia, Krawczak, Michael, Kehrer-Sawatzki, Hildegard, Stenson, Peter D
Format Journal Article
LanguageEnglish
Published Hoboken Wiley Subscription Services, Inc., A Wiley Company 01.06.2010
John Wiley & Sons, Inc
Wiley
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Abstract The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated "personalized genomics." With ~300 new "inherited disease genes" (and ~10,000 new mutations) being identified annually, it is pertinent to ask how many "inherited disease genes" there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene "essentiality" and "dispensability." Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt. Hum Mutat 31:631-655, 2010.
AbstractList The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated “personalized genomics.” With ∼300 new “inherited disease genes” (and ∼10,000 new mutations) being identified annually, it is pertinent to ask how many “inherited disease genes” there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene “essentiality” and “dispensability.” Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease‐associated mutation within noncoding regions remote from the genes whose function they disrupt. Hum Mutat 31:631–655, 2010. © 2010 Wiley‐Liss, Inc.
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated "personalized genomics." With 300 new "inherited disease genes" (and 10,000 new mutations) being identified annually, it is pertinent to ask how many "inherited disease genes" there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene "essentiality" and "dispensability." Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt. Hum Mutat 31:631-655, 2010. © 2010 Wiley-Liss, Inc.
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated "personalized genomics." With approximately 300 new "inherited disease genes" (and approximately 10,000 new mutations) being identified annually, it is pertinent to ask how many "inherited disease genes" there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene "essentiality" and "dispensability."Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt.The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated "personalized genomics." With approximately 300 new "inherited disease genes" (and approximately 10,000 new mutations) being identified annually, it is pertinent to ask how many "inherited disease genes" there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene "essentiality" and "dispensability."Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt.
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated personalized genomics. With 300 new inherited disease genes (and 10,000 new mutations) being identified annually, it is pertinent to ask how many inherited disease genes there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene essentiality and dispensability. Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt. Hum Mutat 31:631-655, 2010.
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than 3,700 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated "personalized genomics." With approximately 300 new "inherited disease genes" (and approximately 10,000 new mutations) being identified annually, it is pertinent to ask how many "inherited disease genes" there are in the human genome, how many mutations reside within them, and where such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene "essentiality" and "dispensability."Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus toward screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within noncoding regions remote from the genes whose function they disrupt.
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, is set tohas now exceeded 100,000 in more than 3,7600 different genes. The availability of these data has both revolutionized the study of the morbid anatomy of the human genome and facilitated ‘personalized genomics'. With ~300 new ‘inherited disease genes' (and ~10,000 new mutations) being identified annually, it is pertinent to ask how many ‘inherited disease genes' there are there in the human genome, how many mutations reside within them and where are such lesions are likely to be located? To address these questions, it is necessary not only to reconsider how we define human genes but also to explore notions of gene ‘'essentiality'' and ‘dispensability'. Answers to these questions are now emerging from recent novel insights into genome structure and function and through complete genome sequence information derived from multiple individual human genomes. However, a change in focus towards screening functional genomic elements as opposed to genes sensu stricto will be required if we are to capitalize fully on recent technical and conceptual advances and identify new types of disease-associated mutation within non-coding regions remote from the genes whose function they disrupt.
Author Cooper, David N
Howells, Katy
Phillips, Andrew D
Kehrer-Sawatzki, Hildegard
Stenson, Peter D
Mort, Matthew
Krawczak, Michael
Chuzhanova, Nadia
Chen, Jian-Min
Ball, Edward V
Author_xml – sequence: 1
  fullname: Cooper, David N
– sequence: 2
  fullname: Chen, Jian-Min
– sequence: 3
  fullname: Ball, Edward V
– sequence: 4
  fullname: Howells, Katy
– sequence: 5
  fullname: Mort, Matthew
– sequence: 6
  fullname: Phillips, Andrew D
– sequence: 7
  fullname: Chuzhanova, Nadia
– sequence: 8
  fullname: Krawczak, Michael
– sequence: 9
  fullname: Kehrer-Sawatzki, Hildegard
– sequence: 10
  fullname: Stenson, Peter D
BackLink https://www.ncbi.nlm.nih.gov/pubmed/20506564$$D View this record in MEDLINE/PubMed
https://hal.science/hal-00552385$$DView record in HAL
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2009; 89
2004; 320
2005; 170
2009; 85
2009; 84
2006a; 120
2002; 99
2004; 24
2002; 315
2004; 5
2008; 105
2008; 33
2004; 32
2009; 2009
2009; 93
2008; 29
2004; 36
2007; 176
2008; 25
2008; 118
2008; 24
2005; 76
2001; 56
2005; 77
2006; 444
2010; 8
2007; 17
2009; 66
2009; 69
2010; 2010
2007; 282
2002; 76
2005; 86
2008; 369
2006; 358
2008; 123
2008; 122
2004; 305
2007; 15
2007; 16
2004; 431
2004; 430
2008a; 456
2010a; 28
2005; 1
2008; 40
2009b; 84
2001; 158
2007; 39
2007; 389
2002; 110
2007; 143
2008b; 83
2008; 9
2009c; 46
1978; 299
2008; 3
2008; 4
2001; 107
1985; 64
1996; 38
2009b; 10
1979; 76
2010; 61
2007; 28
2007; 139
2010; 277
2010; 396
2008; 67
2009a; 25
2001; 17
2001; 18
2008; 61
1996; 5
2007; 23
2006; 365
2009; 324
2009; 325
1996; 6
2001; 10
2010; 77
2007; 365
2002; 30
2010; 127
2010
2006; 16
2009d; 119
2006; 17
2006; 15
2009
2007
2010; 362
2008; 322
2009b; 30
2007; 144B
2007; 53
2008; 321
2008; 95
2008; 320
2008; 92
2010; 86
2007; 355
2008a; 29
2009a; 10
2009; 8
2009; 6
2009; 5
2008; 455
2009; 4
2009; 3
2003; 423
2008; 453
2008; 452
2008; 451
2009; 1
2008; 82
2003; 67
2010; 12
2007; 104
2010; 11
2010; 10
2003; 318
2010; 107
2010; 19
2006; 38
2010; 104
2008b; 40
2010; 464
2005; 579
2010; 463
2006b; 120
2009; 11
2010; 20
2010; 27
2009; 10
2010; 24
1990
2006; 24
2006; 22
2000; 97
2007; 8
2009; 124
2007; 5
2009; 19
2010; 30
2009; 15
2009; 18
2009; 17
2010; 31
2010; 38
2007; 447
2010; 327
1991; 78
2005; 353
2010; 328
2007; 90
2002; 3
2009; 459
1996; 14
2009; 457
2009; 578
2009; 458
2010; 42
2007; 316
2010; 49
2007; 317
2007; 315
2008; 659
2009; 462
2008; 417
2009; 101
2007; 80
2007b; 316
2007; 81
2009a; 46
2009; 460
2009; 461
2005; 15
2009; 106
2005; 14
2001; 93
2009; 46
2009; 41
1989; 86
2009b; 324
2000; 9
2005; 21
2007a; 8
2003; 19
2003; 114
2003; 112
2008; 383
2005; 23
1998; 47
2005; 25
2003; 12
2001; 291
2005; 309
2005; 37
2005; 33
2003; 120
2009; 25
1990; 76
2009; 20
2002; 296
2008; 18
2008; 19
2005; 434
2008; 17
2006; 7
2005; 42
2008; 13
2001; 409
2006; 4
2006; 2
2006; 314
2003; 1638
2009; 27
2006; 312
2009; 29
1994; 8
2009; 30
2009; 31
2009; 149A
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Snippet The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, has now exceeded 100,000 in more than...
The number of reported germline mutations in human nuclear genes, either underlying or associated with inherited disease, is set tohas now exceeded 100,000 in...
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SubjectTerms disease genes
functionome
gene definition
gene essentiality
gene number
Genetic Diseases, Inborn - genetics
Genetic Predisposition to Disease - genetics
Genome, Human - genetics
Genomics - methods
Genomics - statistics & numerical data
Genomics - trends
HGMD
Human Gene Mutation Database
human genome
Humans
inherited mutations
Mutation
mutation detection
mutome
noncoding regions
Open Reading Frames - genetics
Polymorphism, Genetic
Regulatory Sequences, Nucleic Acid - genetics
Title Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics
URI https://api.istex.fr/ark:/67375/WNG-5B7GKFRH-G/fulltext.pdf
https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fhumu.21260
https://www.ncbi.nlm.nih.gov/pubmed/20506564
https://www.proquest.com/docview/1766828545
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https://www.proquest.com/docview/733149399
https://www.proquest.com/docview/746011854
https://www.proquest.com/docview/754552173
https://hal.science/hal-00552385
Volume 31
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