Predicting substrate specificity of adenylation domains of nonribosomal peptide synthetases and other protein properties by latent semantic indexing - Baranašić, Damir; Zucko, Jurica; Diminic, Janko; Gacesa, Ranko; Long, Paul F; Cullum, John; Hranueli, Daslav; Starcevic, Antonio (Journal of industrial microbiology & biotechnology, 2014)
Keywords: amino acid sequences; Amino Acids; Amino Acids - chemistry; Analysis; Biochemistry; Bioinformatics; Biomedical and Life Sciences; Biosynthesis; Biotechnology; Catalytic Domain; chemistry; classification; Decomposition; Documents; Genetic Engineering; Genomes; Genomics; Inorganic Chemistry; Kinases; Life Sciences; ligases; Linear algebra; metabolism; Metabolites; methods; Microbiology; Original Article; Peptide Synthases; Peptide Synthases - chemistry; Peptide Synthases - classification; Peptide Synthases - metabolism; Peptides; prediction; Proteins; Semantics; Sequence Alignment; Sequence Analysis, Protein; Sequence Analysis, Protein - methods; Studies; Substrate Specificity; Substrates; Adenylation domains; Functional subtype; LSI; NRPS; Protein tokenization