Species diversity in the new lamprey genus Occidentis, formerly classified as western North American ‘Lampetra’
Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-ba...
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Published in | PloS one Vol. 19; no. 12; p. e0313911 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
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Public Library of Science
19.12.2024
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Abstract | Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus
Lampetra
along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic
Lampetra
. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus,
Occidentis
. To assess species diversity within
Occidentis
, we performed a species delimitation analysis using all publicly available cytochrome
b
sequences of the genus. Similar to previous studies,
O
.
ayresii
and
O
.
richardsoni
were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to
O
.
pacifica
,
O
.
hubbsi
, and the diverse
O
.
ayresii
species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with
O
.
hubbsi
. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under
Occidentis
is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within
Occidentis
will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys. |
---|---|
AbstractList | Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus
Lampetra
along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic
Lampetra
. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus,
Occidentis
. To assess species diversity within
Occidentis
, we performed a species delimitation analysis using all publicly available cytochrome
b
sequences of the genus. Similar to previous studies,
O
.
ayresii
and
O
.
richardsoni
were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to
O
.
pacifica
,
O
.
hubbsi
, and the diverse
O
.
ayresii
species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with
O
.
hubbsi
. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under
Occidentis
is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within
Occidentis
will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys. Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys. Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys. |
Audience | Academic |
Author | Renaud, Claude B. Carim, Kellie J. Blanchard, Monica R. Auringer, Grace Docker, Margaret F. Parker, Christina Young, Michael K. Clemens, Benjamin J. |
AuthorAffiliation | 4 Research and Collections, Canadian Museum of Nature, Ottawa, Ontario, Canada 7 California Department of Fish and Wildlife, Sacramento, California, United States of America 6 Washington Department of Fish and Wildlife, Ridgefield, Washington, United States of America Oklahoma State University, UNITED STATES OF AMERICA 8 National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America 1 Aldo Leopold Wilderness Research Institute, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America 3 Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada 2 Department of Animal Science, University of California, Davis, California, United States of America 5 Corvallis Research Lab, Oregon Department of Fish and Wildlife, Corvallis, Oregon, United States of America |
AuthorAffiliation_xml | – name: 7 California Department of Fish and Wildlife, Sacramento, California, United States of America – name: 1 Aldo Leopold Wilderness Research Institute, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America – name: 5 Corvallis Research Lab, Oregon Department of Fish and Wildlife, Corvallis, Oregon, United States of America – name: 8 National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America – name: 2 Department of Animal Science, University of California, Davis, California, United States of America – name: 4 Research and Collections, Canadian Museum of Nature, Ottawa, Ontario, Canada – name: 3 Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada – name: Oklahoma State University, UNITED STATES OF AMERICA – name: 6 Washington Department of Fish and Wildlife, Ridgefield, Washington, United States of America |
Author_xml | – sequence: 1 givenname: Kellie J. orcidid: 0000-0002-9622-9146 surname: Carim fullname: Carim, Kellie J. – sequence: 2 givenname: Grace surname: Auringer fullname: Auringer, Grace – sequence: 3 givenname: Margaret F. surname: Docker fullname: Docker, Margaret F. – sequence: 4 givenname: Claude B. surname: Renaud fullname: Renaud, Claude B. – sequence: 5 givenname: Benjamin J. surname: Clemens fullname: Clemens, Benjamin J. – sequence: 6 givenname: Monica R. orcidid: 0009-0009-5112-5288 surname: Blanchard fullname: Blanchard, Monica R. – sequence: 7 givenname: Christina orcidid: 0000-0003-0214-1301 surname: Parker fullname: Parker, Christina – sequence: 8 givenname: Michael K. surname: Young fullname: Young, Michael K. |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/39700072$$D View this record in MEDLINE/PubMed |
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SubjectTerms | Animals Bats Biodiversity Biological diversity Biology and Life Sciences Candidate species Cephalaspidomorphi Complexity Computer and Information Sciences Conserved sequence Cytochrome Cytochrome b Cytochromes b - genetics Datasets Divergence DNA, Mitochondrial - genetics Earth Sciences Ecology and Environmental Sciences Evolutionary genetics Genetic aspects Genetic diversity Genetic Variation Geographical distribution Identification and classification Lampetra Lampreys Lampreys - classification Lampreys - genetics Life history Morphology New genera North America Northern Hemisphere Phylogenetics Phylogeny Rivers Species diversity Species Specificity Taxonomy |
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Title | Species diversity in the new lamprey genus Occidentis, formerly classified as western North American ‘Lampetra’ |
URI | https://www.ncbi.nlm.nih.gov/pubmed/39700072 https://www.proquest.com/docview/3147411473 https://www.proquest.com/docview/3147480495 https://pubmed.ncbi.nlm.nih.gov/PMC11658800 https://doaj.org/article/1a95db0e128a4012b7f606885829ad70 http://dx.doi.org/10.1371/journal.pone.0313911 |
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