Species diversity in the new lamprey genus Occidentis, formerly classified as western North American ‘Lampetra’

Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-ba...

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Published inPloS one Vol. 19; no. 12; p. e0313911
Main Authors Carim, Kellie J., Auringer, Grace, Docker, Margaret F., Renaud, Claude B., Clemens, Benjamin J., Blanchard, Monica R., Parker, Christina, Young, Michael K.
Format Journal Article
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Published United States Public Library of Science 19.12.2024
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Abstract Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra . Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis . To assess species diversity within Occidentis , we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O . ayresii and O . richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O . pacifica , O . hubbsi , and the diverse O . ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O . hubbsi . Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.
AbstractList Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra . Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis . To assess species diversity within Occidentis , we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O . ayresii and O . richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O . pacifica , O . hubbsi , and the diverse O . ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O . hubbsi . Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.
Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.
Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.
Audience Academic
Author Renaud, Claude B.
Carim, Kellie J.
Blanchard, Monica R.
Auringer, Grace
Docker, Margaret F.
Parker, Christina
Young, Michael K.
Clemens, Benjamin J.
AuthorAffiliation 4 Research and Collections, Canadian Museum of Nature, Ottawa, Ontario, Canada
7 California Department of Fish and Wildlife, Sacramento, California, United States of America
6 Washington Department of Fish and Wildlife, Ridgefield, Washington, United States of America
Oklahoma State University, UNITED STATES OF AMERICA
8 National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America
1 Aldo Leopold Wilderness Research Institute, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America
3 Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada
2 Department of Animal Science, University of California, Davis, California, United States of America
5 Corvallis Research Lab, Oregon Department of Fish and Wildlife, Corvallis, Oregon, United States of America
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/39700072$$D View this record in MEDLINE/PubMed
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Snippet Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in...
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SubjectTerms Animals
Bats
Biodiversity
Biological diversity
Biology and Life Sciences
Candidate species
Cephalaspidomorphi
Complexity
Computer and Information Sciences
Conserved sequence
Cytochrome
Cytochrome b
Cytochromes b - genetics
Datasets
Divergence
DNA, Mitochondrial - genetics
Earth Sciences
Ecology and Environmental Sciences
Evolutionary genetics
Genetic aspects
Genetic diversity
Genetic Variation
Geographical distribution
Identification and classification
Lampetra
Lampreys
Lampreys - classification
Lampreys - genetics
Life history
Morphology
New genera
North America
Northern Hemisphere
Phylogenetics
Phylogeny
Rivers
Species diversity
Species Specificity
Taxonomy
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Title Species diversity in the new lamprey genus Occidentis, formerly classified as western North American ‘Lampetra’
URI https://www.ncbi.nlm.nih.gov/pubmed/39700072
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http://dx.doi.org/10.1371/journal.pone.0313911
Volume 19
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