The Use of MALDI-TOF Mass Spectrometry to Analyze Commensal Oral Yeasts in Nursing Home Residents

Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home resident...

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Published inMicroorganisms Vol. 9; no. 1; p. 142
Main Authors Lu, Jang-Jih, Lo, Hsiu-Jung, Lee, Chih-Hua, Chen, Mei-Jun, Lin, Chih-Chao, Chen, Yin-Zhi, Tsai, Ming-Horng, Wang, Shao-Hung
Format Journal Article
LanguageEnglish
Published Switzerland MDPI AG 09.01.2021
MDPI
Subjects
Biology (General)
Candida
CHROMagar Candida
Color
commensal yeast
Cutaneotrichosporon
Deoxyribonucleic acid
DNA
elderly
Exophiala dermatitidis
Fungi
Gene sequencing
geriatric medicine
Identification methods
Immobilization
Ionization
Ions
Laboratories
MALDI-TOF MS
Mass spectrometry
Mass spectroscopy
matrix-assisted laser desorption-ionization mass spectrometry
Microbiota
Microorganisms
Morphology
Nucleotide sequence
nucleotide sequences
Nursing care
Nursing homes
Older people
oral cavity microorganisms
Oral diseases
Plates
QH301-705.5
Rare species
Ribosomal DNA
Scientific imaging
Spectroscopy
Thermal cycling
Trichosporon
Yeast
yeasts
Germany
commensal yeast
MALDI-TOF MS
CHROMagar Candida
oral cavity microorganisms
geriatric medicine
Online AccessGet full text
ISSN2076-2607
2076-2607
DOI10.3390/microorganisms9010142

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Abstract Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar Candida plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. Candida species form the majority (78.1%), followed by Trichosporon/Cutaneotrichosporon species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including Candida ethanolica, Cutaneotrichosporon jirovecii, Exophiala dermatitidis, and Fereydounia khargensis. Almost all of the isolates have a regular color on the CHROMagar Candida plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.
AbstractList Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar Candida plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. Candida species form the majority (78.1%), followed by Trichosporon/Cutaneotrichosporon species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including Candida ethanolica, Cutaneotrichosporon jirovecii, Exophiala dermatitidis, and Fereydounia khargensis. Almost all of the isolates have a regular color on the CHROMagar Candida plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar Candida plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. Candida species form the majority (78.1%), followed by Trichosporon/Cutaneotrichosporon species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including Candida ethanolica , Cutaneotrichosporon jirovecii , Exophiala dermatitidis , and Fereydounia khargensis . Almost all of the isolates have a regular color on the CHROMagar Candida plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. species form the majority (78.1%), followed by species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including , , , and . Almost all of the isolates have a regular color on the CHROMagar plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar Candida plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. Candida species form the majority (78.1%), followed by Trichosporon/Cutaneotrichosporon species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including Candida ethanolica, Cutaneotrichosporon jirovecii, Exophiala dermatitidis, and Fereydounia khargensis. Almost all of the isolates have a regular color on the CHROMagar Candida plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in clinical laboratories. This study isolates yeast-like microorganisms in the oral washes that are collected from non-bedridden nursing home residents, using CHROMagar Candida plates, and identifies them using Bruker MALDI-TOF MS. The ribosomal DNA sequences of the isolates are then examined. Three hundred and twenty yeast isolates are isolated from the oral washes. Candida species form the majority (78.1%), followed by Trichosporon/Cutaneotrichosporon species (8.8%). Bruker MALDI-TOF MS gives a high-level confidence, with a log(score) value of ≥1.8, and identifies 96.9% of the isolates. There are six inconclusive results (1.9%), and those sequences are verified as rare clinical species, including Candida ethanolica, Cutaneotrichosporon jirovecii, Exophiala dermatitidis, and Fereydounia khargensis. Almost all of the isolates have a regular color on the CHROMagar Candida plates. If the colonies are grouped by color on the plates, a specific dominant yeast species is present in each color group, except for purple or orange isolates. In conclusion, MALDI-TOF MS is verified as a fast, accurate and practical method to analyze oral yeasts in elderly subjects.
Author Chih-Hua Lee
Chih-Chao Lin
Yin-Zhi Chen
Hsiu-Jung Lo
Shao-Hung Wang
Jang-Jih Lu
Ming-Horng Tsai
Mei-Jun Chen
AuthorAffiliation 6 Division of Neonatology and Pediatric Hematology/Oncology, Department of Pediatrics, Chang Gung Memorial Hospital, Yunlin County 638, Taiwan; mingmin.tw@yahoo.com.tw
4 National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Miaoli County 350, Taiwan; hjlo@nhri.edu.tw (H.-J.L.); chihchao.lin@opnano.com (C.-C.L.); injue0705@nhri.edu.tw (Y.-Z.C.)
7 Department of Microbiology, Immunology and Biopharmaceuticals, National Chiayi University, Chiayi City 600, Taiwan
5 School of Dentistry, China Medical University, Taichung City 404, Taiwan
2 Department of Medical Biotechnology and Laboratory Science, Chang Gung University, Taoyuan City 333, Taiwan
3 Department of Medicine, College of Medicine, Chang Gung University, Taoyuan City 333, Taiwan
1 Department of Laboratory Medicine, Chang-Gung Memorial Hospital Linkou, Taoyuan City 333, Taiwan; jjlpcp@adm.cgmh.org.tw (J.-J.L.); josh60708@cgmh.org.tw (C.-H.L.); may95173@cgmh.org.tw (M.-J.C.)
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Keywords commensal yeast
MALDI-TOF MS
CHROMagar Candida
oral cavity microorganisms
geriatric medicine
Language English
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Snippet Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid and accurate method to identify microorganisms in...
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StartPage 142
SubjectTerms Biology (General)
Candida
CHROMagar Candida
Color
commensal yeast
Cutaneotrichosporon
Deoxyribonucleic acid
DNA
elderly
Exophiala dermatitidis
Fungi
Gene sequencing
geriatric medicine
Identification methods
Immobilization
Ionization
Ions
Laboratories
MALDI-TOF MS
Mass spectrometry
Mass spectroscopy
matrix-assisted laser desorption-ionization mass spectrometry
Microbiota
Microorganisms
Morphology
Nucleotide sequence
nucleotide sequences
Nursing care
Nursing homes
Older people
oral cavity microorganisms
Oral diseases
Plates
QH301-705.5
Rare species
Ribosomal DNA
Scientific imaging
Spectroscopy
Thermal cycling
Trichosporon
Yeast
yeasts
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Title The Use of MALDI-TOF Mass Spectrometry to Analyze Commensal Oral Yeasts in Nursing Home Residents
URI https://cir.nii.ac.jp/crid/1872553967945644160
https://www.ncbi.nlm.nih.gov/pubmed/33435490
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Volume 9
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