Glomerales Dominate Arbuscular Mycorrhizal Fungal Communities Associated with Spontaneous Plants in Phosphate-Rich Soils of Former Rock Phosphate Mining Sites

Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF communities of native plants grown spontaneously on former mining sites either enriched (P sites) or not enriched with P (nP sites) by minin...

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Published inMicroorganisms (Basel) Vol. 10; no. 12; p. 2406
Main Authors Ducousso-Détrez, Amandine, Raveau, Robin, Fontaine, Joël, Hijri, Mohamed, Lounès-Hadj Sahraoui, Anissa
Format Journal Article
LanguageEnglish
Published Switzerland MDPI AG 05.12.2022
MDPI
Subjects
Agricultural production
arbuscular mycorrhizal fungi
Arbuscular mycorrhizas
Biodiversity and Ecology
Claroideoglomeraceae
Community structure
Diversisporaceae
diversity
DNA barcoding
Ecological effects
Ecosystems
Enrichment
Environmental aspects
Environmental Sciences
Flowers & plants
Fungi
Glomeraceae
Indicator species
Indigenous plants
Life history
Microbial populations
Mines and mineral resources
Mining
mycorrhizal fungi
Mycorrhizas
Paraglomeraceae
Phosphate minerals
Phosphate rock
Phosphorus
Plant-soil relationships
Rock phosphate
Rocks
Scientific imaging
soil
Soil fertility
Soil fungi
Soils
taxonomic composition
Taxonomy
vesicular arbuscular mycorrhizae
France
rock phosphate
diversity
arbuscular mycorrhizal fungi
taxonomic composition
phosphorus
A arbuscular mycorrhizal fungi
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Abstract Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF communities of native plants grown spontaneously on former mining sites either enriched (P sites) or not enriched with P (nP sites) by mining cuttings of rock phosphate (RP) were studied. No significant differences were observed in the root mycorrhizal rates of the plants when comparing P and nP sites. The assessment of AMF diversity and community structure using Illumina MiSeq metabarcoding and targeting 18S rDNA in roots and rhizospheric soils showed a total of 318 Amplicon Sequence Variants (ASVs) of Glomeromycota phylum. No significant difference in the diversity was found between P and nP sites. Glomeraceae species were largely dominant, formed a fungal core of 26 ASVs, and were persistent and abundant in all sites. In the P soils, eight ASVs were identified by indicator species analysis. A trend towards an increase in Diversisporaceae and Claroideoglomeraceae and a reduction in Paraglomeraceae and Glomeraceae were noticed. These results provide new insights into AMF ecology in former RP mining sites; they document that P concentration is a driver of AMF community structures in soils enriched in RP long term but also suggest an influence of land disturbance, ecosystem self-restoration, and AMF life history strategies as drivers of AMF community profiles.
AbstractList Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF communities of native plants grown spontaneously on former mining sites either enriched (P sites) or not enriched with P (nP sites) by mining cuttings of rock phosphate (RP) were studied. No significant differences were observed in the root mycorrhizal rates of the plants when comparing P and nP sites. The assessment of AMF diversity and community structure using Illumina MiSeq metabarcoding and targeting 18S rDNA in roots and rhizospheric soils showed a total of 318 Amplicon Sequence Variants (ASVs) of Glomeromycota phylum. No significant difference in the diversity was found between P and nP sites. Glomeraceae species were largely dominant, formed a fungal core of 26 ASVs, and were persistent and abundant in all sites. In the P soils, eight ASVs were identified by indicator species analysis. A trend towards an increase in Diversisporaceae and Claroideoglomeraceae and a reduction in Paraglomeraceae and Glomeraceae were noticed. These results provide new insights into AMF ecology in former RP mining sites; they document that P concentration is a driver of AMF community structures in soils enriched in RP long term but also suggest an influence of land disturbance, ecosystem self-restoration, and AMF life history strategies as drivers of AMF community profiles.
Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF communities of native plants grown spontaneously on former mining sites either enriched (P sites) or not enriched with P (nP sites) by mining cuttings of rock phosphate (RP) were studied. No significant differences were observed in the root mycorrhizal rates of the plants when comparing P and nP sites. The assessment of AMF diversity and community structure using Illumina MiSeq metabarcoding and targeting 18S rDNA in roots and rhizospheric soils showed a total of 318 Amplicon Sequence Variants (ASVs) of Glomeromycota phylum. No significant difference in the diversity was found between P and nP sites. Glomeraceae species were largely dominant, formed a fungal core of 26 ASVs, and were persistent and abundant in all sites. In the P soils, eight ASVs were identified by indicator species analysis. A trend towards an increase in Diversisporaceae and Claroideoglomeraceae and a reduction in Paraglomeraceae and Glomeraceae were noticed. These results provide new insights into AMF ecology in former RP mining sites; they document that P concentration is a driver of AMF community structures in soils enriched in RP long term but also suggest an influence of land disturbance, ecosystem self-restoration, and AMF life history strategies as drivers of AMF community profiles.Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF communities of native plants grown spontaneously on former mining sites either enriched (P sites) or not enriched with P (nP sites) by mining cuttings of rock phosphate (RP) were studied. No significant differences were observed in the root mycorrhizal rates of the plants when comparing P and nP sites. The assessment of AMF diversity and community structure using Illumina MiSeq metabarcoding and targeting 18S rDNA in roots and rhizospheric soils showed a total of 318 Amplicon Sequence Variants (ASVs) of Glomeromycota phylum. No significant difference in the diversity was found between P and nP sites. Glomeraceae species were largely dominant, formed a fungal core of 26 ASVs, and were persistent and abundant in all sites. In the P soils, eight ASVs were identified by indicator species analysis. A trend towards an increase in Diversisporaceae and Claroideoglomeraceae and a reduction in Paraglomeraceae and Glomeraceae were noticed. These results provide new insights into AMF ecology in former RP mining sites; they document that P concentration is a driver of AMF community structures in soils enriched in RP long term but also suggest an influence of land disturbance, ecosystem self-restoration, and AMF life history strategies as drivers of AMF community profiles.
Audience Academic
Author Hijri, Mohamed
Lounès-Hadj Sahraoui, Anissa
Fontaine, Joël
Raveau, Robin
Ducousso-Détrez, Amandine
AuthorAffiliation 2 Institut de Recherche en Biologie Végétale (IRBV), 3 AgroBioSciences, Université de Montréal, Montréal, QC H1X 2B2, Canada
1 Unité de Chimie Environnementale et Interactions sur le Vivant (UCEIV), Université du Littoral Côte d’Opale, UR 4492, SFR Condorcet FR CNRS 3417, CEDEX, 62228 Calais, France
3 INRAE, UMR SAVE, Bordeaux Science Agro, ISVV, 33882 Villenave d’Ornon, France
4 African Genome Center, Mohammed VI Polytechnic University (UM6P), Ben Guerir 43150, Morocco
AuthorAffiliation_xml – name: 3 INRAE, UMR SAVE, Bordeaux Science Agro, ISVV, 33882 Villenave d’Ornon, France
– name: 4 African Genome Center, Mohammed VI Polytechnic University (UM6P), Ben Guerir 43150, Morocco
– name: 1 Unité de Chimie Environnementale et Interactions sur le Vivant (UCEIV), Université du Littoral Côte d’Opale, UR 4492, SFR Condorcet FR CNRS 3417, CEDEX, 62228 Calais, France
– name: 2 Institut de Recherche en Biologie Végétale (IRBV), 3 AgroBioSciences, Université de Montréal, Montréal, QC H1X 2B2, Canada
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  fullname: Ducousso-Détrez, Amandine
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  givenname: Robin
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  surname: Raveau
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  orcidid: 0000-0001-8478-0128
  surname: Lounès-Hadj Sahraoui
  fullname: Lounès-Hadj Sahraoui, Anissa
BackLink https://www.ncbi.nlm.nih.gov/pubmed/36557659$$D View this record in MEDLINE/PubMed
https://hal.inrae.fr/hal-03932239$$DView record in HAL
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Issue 12
Keywords rock phosphate
diversity
arbuscular mycorrhizal fungi
taxonomic composition
phosphorus
A arbuscular mycorrhizal fungi
Language English
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Snippet Arbuscular mycorrhizal fungi (AMF) are key drivers of soil functioning. They interact with multiple soil parameters, notably, phosphorus (P). In this work, AMF...
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SubjectTerms Agricultural production
arbuscular mycorrhizal fungi
Arbuscular mycorrhizas
Biodiversity and Ecology
Claroideoglomeraceae
Community structure
Diversisporaceae
diversity
DNA barcoding
Ecological effects
Ecosystems
Enrichment
Environmental aspects
Environmental Sciences
Flowers & plants
Fungi
Glomeraceae
Indicator species
Indigenous plants
Life history
Microbial populations
Mines and mineral resources
Mining
mycorrhizal fungi
Mycorrhizas
Paraglomeraceae
Phosphate minerals
Phosphate rock
Phosphorus
Plant-soil relationships
Rock phosphate
Rocks
Scientific imaging
soil
Soil fertility
Soil fungi
Soils
taxonomic composition
Taxonomy
vesicular arbuscular mycorrhizae
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Title Glomerales Dominate Arbuscular Mycorrhizal Fungal Communities Associated with Spontaneous Plants in Phosphate-Rich Soils of Former Rock Phosphate Mining Sites
URI https://www.ncbi.nlm.nih.gov/pubmed/36557659
https://www.proquest.com/docview/2756755226
https://www.proquest.com/docview/2758103809
https://www.proquest.com/docview/3040365915
https://hal.inrae.fr/hal-03932239
https://pubmed.ncbi.nlm.nih.gov/PMC9782746
https://doaj.org/article/d7e7a94b07184f0098e7c3a3086cb463
Volume 10
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