Regulatory mechanisms of RNA function: emerging roles of DNA repair enzymes
The acquisition of an appropriate set of chemical modifications is required in order to establish correct structure of RNA molecules, and essential for their function. Modification of RNA bases affects RNA maturation, RNA processing, RNA quality control, and protein translation. Some RNA modificatio...
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| Published in | Cellular and molecular life sciences : CMLS Vol. 71; no. 13; pp. 2451 - 2465 |
|---|---|
| Main Authors | , |
| Format | Journal Article |
| Language | English |
| Published |
Basel
Springer Basel
01.07.2014
Springer Nature B.V |
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| Abstract | The acquisition of an appropriate set of chemical modifications is required in order to establish correct structure of RNA molecules, and essential for their function. Modification of RNA bases affects RNA maturation, RNA processing, RNA quality control, and protein translation. Some RNA modifications are directly involved in the regulation of these processes. RNA epigenetics is emerging as a mechanism to achieve dynamic regulation of RNA function. Other modifications may prevent or be a signal for degradation. All types of RNA species are subject to processing or degradation, and numerous cellular mechanisms are involved. Unexpectedly, several studies during the last decade have established a connection between DNA and RNA surveillance mechanisms in eukaryotes. Several proteins that respond to DNA damage, either to process or to signal the presence of damaged DNA, have been shown to participate in RNA quality control, turnover or processing. Some enzymes that repair DNA damage may also process modified RNA substrates. In this review, we give an overview of the DNA repair proteins that function in RNA metabolism. We also discuss the roles of two base excision repair enzymes, SMUG1 and APE1, in RNA quality control. |
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| AbstractList | The acquisition of an appropriate set of chemical modifications is required in order to establish correct structure of RNA molecules, and essential for their function. Modification of RNA bases affects RNA maturation, RNA processing, RNA quality control, and protein translation. Some RNA modifications are directly involved in the regulation of these processes. RNA epigenetics is emerging as a mechanism to achieve dynamic regulation of RNA function. Other modifications may prevent or be a signal for degradation. All types of RNA species are subject to processing or degradation, and numerous cellular mechanisms are involved. Unexpectedly, several studies during the last decade have established a connection between DNA and RNA surveillance mechanisms in eukaryotes. Several proteins that respond to DNA damage, either to process or to signal the presence of damaged DNA, have been shown to participate in RNA quality control, turnover or processing. Some enzymes that repair DNA damage may also process modified RNA substrates. In this review, we give an overview of the DNA repair proteins that function in RNA metabolism. We also discuss the roles of two base excision repair enzymes, SMUG1 and APE1, in RNA quality control. The acquisition of an appropriate set of chemical modifications is required in order to establish correct structure of RNA molecules, and essential for their function. Modification of RNA bases affects RNA maturation, RNA processing, RNA quality control, and protein translation. Some RNA modifications are directly involved in the regulation of these processes. RNA epigenetics is emerging as a mechanism to achieve dynamic regulation of RNA function. Other modifications may prevent or be a signal for degradation. All types of RNA species are subject to processing or degradation, and numerous cellular mechanisms are involved. Unexpectedly, several studies during the last decade have established a connection between DNA and RNA surveillance mechanisms in eukaryotes. Several proteins that respond to DNA damage, either to process or to signal the presence of damaged DNA, have been shown to participate in RNA quality control, turnover or processing. Some enzymes that repair DNA damage may also process modified RNA substrates. In this review, we give an overview of the DNA repair proteins that function in RNA metabolism. We also discuss the roles of two base excision repair enzymes, SMUG1 and APE1, in RNA quality control.The acquisition of an appropriate set of chemical modifications is required in order to establish correct structure of RNA molecules, and essential for their function. Modification of RNA bases affects RNA maturation, RNA processing, RNA quality control, and protein translation. Some RNA modifications are directly involved in the regulation of these processes. RNA epigenetics is emerging as a mechanism to achieve dynamic regulation of RNA function. Other modifications may prevent or be a signal for degradation. All types of RNA species are subject to processing or degradation, and numerous cellular mechanisms are involved. Unexpectedly, several studies during the last decade have established a connection between DNA and RNA surveillance mechanisms in eukaryotes. Several proteins that respond to DNA damage, either to process or to signal the presence of damaged DNA, have been shown to participate in RNA quality control, turnover or processing. Some enzymes that repair DNA damage may also process modified RNA substrates. In this review, we give an overview of the DNA repair proteins that function in RNA metabolism. We also discuss the roles of two base excision repair enzymes, SMUG1 and APE1, in RNA quality control. |
| Author | Nilsen, Hilde Jobert, Laure |
| Author_xml | – sequence: 1 givenname: Laure surname: Jobert fullname: Jobert, Laure organization: Division of Medicine, Department of Clinical Molecular Biology, Akershus University Hospital – sequence: 2 givenname: Hilde surname: Nilsen fullname: Nilsen, Hilde email: hilde.nilsen@medisin.uio.no, hilde.nilsen@ahus.no organization: Division of Medicine, Department of Clinical Molecular Biology, Akershus University Hospital, Department of Clinical Molecular Biology, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/24496644$$D View this record in MEDLINE/PubMed |
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| Keywords | SMUG1 RNA editing RNA quality control APE1 Base excision repair RNA epigenetics |
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| SubjectTerms | Base excision repair Biochemistry Biomedical and Life Sciences Biomedicine Cell Biology Damage Degradation Deoxyribonucleic acid DNA DNA Damage DNA repair DNA Repair - genetics DNA-(Apurinic or Apyrimidinic Site) Lyase - genetics DNA-(Apurinic or Apyrimidinic Site) Lyase - metabolism Enzymes Epigenetics Eukaryotes eukaryotic cells Humans Life Sciences metabolism monitoring Protein Biosynthesis Proteins Quality control Regulatory mechanisms (biology) Review Ribonucleic acid RNA RNA - chemistry RNA modification RNA processing RNA Stability - genetics SMUG1 protein translation (genetics) Uracil-DNA Glycosidase - genetics Uracil-DNA Glycosidase - metabolism |
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| Title | Regulatory mechanisms of RNA function: emerging roles of DNA repair enzymes |
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