Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement

Brassica napus (2 n  = 4 x  = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2 n  = 2 x  = 20, AA) and Brassica oleracea (2 n  = 2 x  = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain...

Full description

Saved in:
Bibliographic Details
Published inNature communications Vol. 10; no. 1; pp. 1154 - 12
Main Authors Lu, Kun, Wei, Lijuan, Li, Xiaolong, Wang, Yuntong, Wu, Jian, Liu, Miao, Zhang, Chao, Chen, Zhiyou, Xiao, Zhongchun, Jian, Hongju, Cheng, Feng, Zhang, Kai, Du, Hai, Cheng, Xinchao, Qu, Cunming, Qian, Wei, Liu, Liezhao, Wang, Rui, Zou, Qingyuan, Ying, Jiamin, Xu, Xingfu, Mei, Jiaqing, Liang, Ying, Chai, You-Rong, Tang, Zhanglin, Wan, Huafang, Ni, Yu, He, Yajun, Lin, Na, Fan, Yonghai, Sun, Wei, Li, Nan-Nan, Zhou, Gang, Zheng, Hongkun, Wang, Xiaowu, Paterson, Andrew H., Li, Jiana
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 11.03.2019
Nature Publishing Group
Nature Portfolio
Subjects
38/91
45/23
45/43
45/47
45/77
49/39
631/208/205/2138
631/449/2492
631/449/2669
631/61/447/8
Acclimatization - genetics
Brassica
Brassica napus
Brassica napus - genetics
Brassica rapa
Brassica rapa - genetics
Broccoli
Chromosomes, Plant
Ecotype
Gene expression
Gene Expression Profiling
Genes
Genetic improvement
Genetic Loci
Genetic Speciation
Genome, Plant - genetics
Genome-wide association studies
Genomes
Humanities and Social Sciences
Interspecific
multidisciplinary
Plant Breeding
Rape plants
Science
Science (multidisciplinary)
Seeds - genetics
Whole Genome Sequencing
Online AccessGet full text

Cover

Abstract Brassica napus (2 n  = 4 x  = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2 n  = 2 x  = 20, AA) and Brassica oleracea (2 n  = 2 x  = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus . Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus . Brassica napus is a globally important oil crop, but the origin of the allotetraploid genome and its improvement process are largely unknown. Here, the authors take a population genetic approach to resolve its origin and evolutionary history, and identify candidate genes related to important agricultural traits.
AbstractList Brassica napus (2 n  = 4 x  = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2 n  = 2 x  = 20, AA) and Brassica oleracea (2 n  = 2 x  = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus . Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus .
Brassica napus (2 n  = 4 x  = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2 n  = 2 x  = 20, AA) and Brassica oleracea (2 n  = 2 x  = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus . Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus . Brassica napus is a globally important oil crop, but the origin of the allotetraploid genome and its improvement process are largely unknown. Here, the authors take a population genetic approach to resolve its origin and evolutionary history, and identify candidate genes related to important agricultural traits.
Brassica napus is a globally important oil crop, but the origin of the allotetraploid genome and its improvement process are largely unknown. Here, the authors take a population genetic approach to resolve its origin and evolutionary history, and identify candidate genes related to important agricultural traits.
Brassica napus (2n = 4x = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2n = 2x = 20, AA) and Brassica oleracea (2n = 2x = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus. Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus.Brassica napus (2n = 4x = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2n = 2x = 20, AA) and Brassica oleracea (2n = 2x = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus. Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus.
Brassica napus (2n = 4x = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2n = 2x = 20, AA) and Brassica oleracea (2n = 2x = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus. Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus.
Brassica napus (2n = 4x = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2n = 2x = 20, AA) and Brassica oleracea (2n = 2x = 18, CC). However, no truly wild B. napus populations are known; its origin and improvement processes remain unclear. Here, we resequence 588 B. napus accessions. We uncover that the A subgenome may evolve from the ancestor of European turnip and the C subgenome may evolve from the common ancestor of kohlrabi, cauliflower, broccoli, and Chinese kale. Additionally, winter oilseed may be the original form of B. napus. Subgenome-specific selection of defense-response genes has contributed to environmental adaptation after formation of the species, whereas asymmetrical subgenomic selection has led to ecotype change. By integrating genome-wide association studies, selection signals, and transcriptome analyses, we identify genes associated with improved stress tolerance, oil content, seed quality, and ecotype improvement. They are candidates for further functional characterization and genetic improvement of B. napus.Brassica napus is a globally important oil crop, but the origin of the allotetraploid genome and its improvement process are largely unknown. Here, the authors take a population genetic approach to resolve its origin and evolutionary history, and identify candidate genes related to important agricultural traits.
ArticleNumber 1154
Author Wu, Jian
Chen, Zhiyou
Li, Nan-Nan
Qu, Cunming
Cheng, Feng
Liu, Liezhao
Xu, Xingfu
Zheng, Hongkun
Wang, Xiaowu
Lin, Na
Ying, Jiamin
Tang, Zhanglin
Mei, Jiaqing
Lu, Kun
Fan, Yonghai
Jian, Hongju
Du, Hai
Paterson, Andrew H.
Cheng, Xinchao
Wang, Yuntong
Wei, Lijuan
Qian, Wei
Liang, Ying
Li, Xiaolong
Zhang, Kai
Wang, Rui
Zhou, Gang
Chai, You-Rong
Sun, Wei
Liu, Miao
Zhang, Chao
Li, Jiana
Xiao, Zhongchun
Wan, Huafang
Ni, Yu
He, Yajun
Zou, Qingyuan
Author_xml – sequence: 1
  givenname: Kun
  orcidid: 0000-0003-1370-8633
  surname: Lu
  fullname: Lu, Kun
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 2
  givenname: Lijuan
  surname: Wei
  fullname: Wei, Lijuan
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei
– sequence: 3
  givenname: Xiaolong
  surname: Li
  fullname: Li, Xiaolong
  organization: Biomarker Technologies Corporation
– sequence: 4
  givenname: Yuntong
  surname: Wang
  fullname: Wang, Yuntong
  organization: Biomarker Technologies Corporation
– sequence: 5
  givenname: Jian
  surname: Wu
  fullname: Wu, Jian
  organization: Institute of Vegetables and Flowers, Chinese Academy of Agricultural Science
– sequence: 6
  givenname: Miao
  surname: Liu
  fullname: Liu, Miao
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 7
  givenname: Chao
  surname: Zhang
  fullname: Zhang, Chao
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 8
  givenname: Zhiyou
  surname: Chen
  fullname: Chen, Zhiyou
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 9
  givenname: Zhongchun
  surname: Xiao
  fullname: Xiao, Zhongchun
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 10
  givenname: Hongju
  surname: Jian
  fullname: Jian, Hongju
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 11
  givenname: Feng
  orcidid: 0000-0003-2982-9675
  surname: Cheng
  fullname: Cheng, Feng
  organization: Institute of Vegetables and Flowers, Chinese Academy of Agricultural Science
– sequence: 12
  givenname: Kai
  surname: Zhang
  fullname: Zhang, Kai
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 13
  givenname: Hai
  surname: Du
  fullname: Du, Hai
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 14
  givenname: Xinchao
  surname: Cheng
  fullname: Cheng, Xinchao
  organization: State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 15
  givenname: Cunming
  surname: Qu
  fullname: Qu, Cunming
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 16
  givenname: Wei
  surname: Qian
  fullname: Qian, Wei
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 17
  givenname: Liezhao
  surname: Liu
  fullname: Liu, Liezhao
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 18
  givenname: Rui
  surname: Wang
  fullname: Wang, Rui
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 19
  givenname: Qingyuan
  surname: Zou
  fullname: Zou, Qingyuan
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 20
  givenname: Jiamin
  surname: Ying
  fullname: Ying, Jiamin
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 21
  givenname: Xingfu
  surname: Xu
  fullname: Xu, Xingfu
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei
– sequence: 22
  givenname: Jiaqing
  surname: Mei
  fullname: Mei, Jiaqing
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei
– sequence: 23
  givenname: Ying
  surname: Liang
  fullname: Liang, Ying
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 24
  givenname: You-Rong
  surname: Chai
  fullname: Chai, You-Rong
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 25
  givenname: Zhanglin
  surname: Tang
  fullname: Tang, Zhanglin
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 26
  givenname: Huafang
  surname: Wan
  fullname: Wan, Huafang
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 27
  givenname: Yu
  surname: Ni
  fullname: Ni, Yu
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
– sequence: 28
  givenname: Yajun
  surname: He
  fullname: He, Yajun
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 29
  givenname: Na
  surname: Lin
  fullname: Lin, Na
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 30
  givenname: Yonghai
  surname: Fan
  fullname: Fan, Yonghai
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 31
  givenname: Wei
  surname: Sun
  fullname: Sun, Wei
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei
– sequence: 32
  givenname: Nan-Nan
  surname: Li
  fullname: Li, Nan-Nan
  organization: Academy of Agricultural Sciences, Southwest University, Beibei
– sequence: 33
  givenname: Gang
  orcidid: 0000-0001-8633-6290
  surname: Zhou
  fullname: Zhou, Gang
  organization: Biomarker Technologies Corporation
– sequence: 34
  givenname: Hongkun
  orcidid: 0000-0002-9426-3615
  surname: Zheng
  fullname: Zheng, Hongkun
  organization: Biomarker Technologies Corporation
– sequence: 35
  givenname: Xiaowu
  surname: Wang
  fullname: Wang, Xiaowu
  email: wangxw@mail.caas.net.cn
  organization: Institute of Vegetables and Flowers, Chinese Academy of Agricultural Science
– sequence: 36
  givenname: Andrew H.
  surname: Paterson
  fullname: Paterson, Andrew H.
  email: paterson@uga.edu
  organization: Plant Genome Mapping Laboratory, University of Georgia
– sequence: 37
  givenname: Jiana
  surname: Li
  fullname: Li, Jiana
  email: ljn1950@swu.edu.cn
  organization: College of Agronomy and Biotechnology, Southwest University, Beibei, Academy of Agricultural Sciences, Southwest University, Beibei, State Cultivation Base of Crop Stress Biology for Southern Mountainous Land of Southwest University, Beibei
BackLink https://www.ncbi.nlm.nih.gov/pubmed/30858362$$D View this record in MEDLINE/PubMed
BookMark eNp9Ustu1TAUtFARfdAfYIEssWET8CuOvUGiFYVKldiAWFqOc5L6KrEvdnIl_h7fm1LaLuqNXzPjOcdzio5CDIDQG0o-UMLVxyyokE1FqK6IplxU-gU6YUTQijaMHz1YH6PznDekDK6pEuIVOuZE1YpLdoK6X7dxhGqAECfACTL8XiA4H4ay2YEdM75INmfvLA52u2Qckx98wDZ0uLBg9g6P0Xnswy6OO-jKAvs5Yz9tU9zBBGF-jV72RQnO7-Yz9PPqy4_Lb9XN96_Xl59vKieJnCtKhGCMta7hhHey051qrWZOUUl71uhaqq6va0HqBrhonFMtBweiqUEoVlt-hq5X3S7ajdkmP9n0x0TrzeEgpsHYVAyPYHpoNGjBO9oLwbWwsiekpZwrzYQiumh9WrW2SztB50oZyY6PRB_fBH9rhrgzUlCq66YIvL8TSLH0NM9m8tnBONoAccmGUU2EprWQBfruCXQTlxRKqw4o0khJWEG9fejo3sq_zywAtgJcijkn6O8hlJh9aMwaGlNCYw6hMfs61ROS87OdfdxX5cfnqXyl5vJOGCD9t_0M6y8F8NVR
CitedBy_id crossref_primary_10_1111_nph_17222
crossref_primary_10_3389_fgene_2021_600789
crossref_primary_10_1007_s00425_022_03991_3
crossref_primary_10_1007_s00122_022_04193_x
crossref_primary_10_1007_s10722_024_01931_6
crossref_primary_10_1016_j_ijbiomac_2024_137257
crossref_primary_10_1016_j_aquaculture_2024_741229
crossref_primary_10_3389_fpls_2022_1032449
crossref_primary_10_1139_gen_2020_0024
crossref_primary_10_1007_s11032_024_01503_7
crossref_primary_10_1186_s12864_022_08520_w
crossref_primary_10_1111_nph_16932
crossref_primary_10_3389_fpls_2019_01104
crossref_primary_10_1371_journal_pone_0242530
crossref_primary_10_3390_plants13070950
crossref_primary_10_1186_s12870_025_06253_y
crossref_primary_10_1111_pbi_13674
crossref_primary_10_3390_horticulturae7080247
crossref_primary_10_3390_foods12112219
crossref_primary_10_1093_jxb_erab191
crossref_primary_10_3390_agronomy11030508
crossref_primary_10_1186_s12864_021_07614_1
crossref_primary_10_3389_fpls_2021_780250
crossref_primary_10_3390_plants11202740
crossref_primary_10_3390_ijms20225675
crossref_primary_10_1126_sciadv_ads7620
crossref_primary_10_3389_fpls_2023_1233996
crossref_primary_10_1093_g3journal_jkab241
crossref_primary_10_3389_fpls_2020_579875
crossref_primary_10_1093_jxb_erad047
crossref_primary_10_1186_s12870_024_05111_7
crossref_primary_10_1186_s12915_023_01806_9
crossref_primary_10_1111_nph_16473
crossref_primary_10_1186_s13068_023_02275_6
crossref_primary_10_1111_pbi_14413
crossref_primary_10_1016_j_molp_2020_09_001
crossref_primary_10_3389_fpls_2022_857149
crossref_primary_10_1038_s41598_022_10410_w
crossref_primary_10_1111_pce_14526
crossref_primary_10_3389_fpls_2022_1028779
crossref_primary_10_3390_plants13172388
crossref_primary_10_1038_s41467_019_10757_1
crossref_primary_10_1186_s12870_022_03901_5
crossref_primary_10_1016_j_pbi_2022_102255
crossref_primary_10_3389_fpls_2022_929197
crossref_primary_10_1071_FP23280
crossref_primary_10_1093_jxb_eraa563
crossref_primary_10_1111_pbi_13456
crossref_primary_10_3390_ijms24054469
crossref_primary_10_1038_s41598_021_98934_5
crossref_primary_10_1111_mec_17624
crossref_primary_10_1016_j_indcrop_2024_118817
crossref_primary_10_1016_j_molp_2023_12_019
crossref_primary_10_3389_fpls_2023_1287950
crossref_primary_10_1007_s00122_023_04402_1
crossref_primary_10_1186_s13068_020_01728_6
crossref_primary_10_3389_fpls_2024_1483635
crossref_primary_10_1111_pce_13694
crossref_primary_10_3390_plants13121703
crossref_primary_10_1007_s10722_022_01512_5
crossref_primary_10_3389_fpls_2023_1123729
crossref_primary_10_3390_ijms20112771
crossref_primary_10_3390_ijms23010220
crossref_primary_10_3390_ijms25052969
crossref_primary_10_1016_j_molp_2023_07_011
crossref_primary_10_1016_j_indcrop_2023_117054
crossref_primary_10_1186_s12870_020_02774_w
crossref_primary_10_1038_s41588_024_01660_7
crossref_primary_10_1186_s12864_020_06893_4
crossref_primary_10_1016_j_envpol_2024_124178
crossref_primary_10_3389_fpls_2022_1057953
crossref_primary_10_1016_j_ocsci_2021_01_001
crossref_primary_10_3390_agronomy13041053
crossref_primary_10_1016_j_ocsci_2021_01_002
crossref_primary_10_1139_gen_2023_0126
crossref_primary_10_1098_rstb_2020_0512
crossref_primary_10_1016_j_plantsci_2020_110543
crossref_primary_10_3389_fpls_2021_640163
crossref_primary_10_1111_pce_14077
crossref_primary_10_1016_j_molp_2023_03_007
crossref_primary_10_1111_pce_15165
crossref_primary_10_1371_journal_pone_0262587
crossref_primary_10_1186_s13068_020_01774_0
crossref_primary_10_1186_s12864_022_08567_9
crossref_primary_10_1186_s12870_022_03485_0
crossref_primary_10_1111_nph_17131
crossref_primary_10_1111_pbi_13636
crossref_primary_10_1071_CP23307
crossref_primary_10_1093_bioinformatics_btae006
crossref_primary_10_3390_ijms24108810
crossref_primary_10_1134_S0026893320040032
crossref_primary_10_1093_plphys_kiab563
crossref_primary_10_1016_j_xplc_2024_100884
crossref_primary_10_1038_s41467_024_49344_4
crossref_primary_10_1186_s12870_024_04734_0
crossref_primary_10_3390_plants12112119
crossref_primary_10_1007_s00122_020_03628_7
crossref_primary_10_1038_s41588_022_01055_6
crossref_primary_10_1093_jxb_erab105
crossref_primary_10_1016_j_jplph_2024_154383
crossref_primary_10_1093_molbev_msad199
crossref_primary_10_1007_s00122_023_04326_w
crossref_primary_10_1016_j_isci_2023_106334
crossref_primary_10_1111_jipb_13635
crossref_primary_10_3389_fpls_2023_1142147
crossref_primary_10_1007_s00122_023_04510_y
crossref_primary_10_1016_j_cj_2020_08_006
crossref_primary_10_3389_fpls_2022_1037206
crossref_primary_10_1038_s41467_024_49504_6
crossref_primary_10_1007_s00122_023_04243_y
crossref_primary_10_3389_fgene_2021_756172
crossref_primary_10_3390_microorganisms11030724
crossref_primary_10_1186_s12864_020_06889_0
crossref_primary_10_3389_fpls_2022_994666
crossref_primary_10_1007_s00344_021_10542_9
crossref_primary_10_3390_ijms23105587
crossref_primary_10_3390_agronomy12071591
crossref_primary_10_1002_tpg2_20088
crossref_primary_10_1111_pbi_14063
crossref_primary_10_3390_plants9101336
crossref_primary_10_1007_s11032_023_01399_9
crossref_primary_10_1038_s41598_023_28661_6
crossref_primary_10_3389_fpls_2022_1035157
crossref_primary_10_3390_cimb46090568
crossref_primary_10_1186_s12302_020_00361_2
crossref_primary_10_1038_s41477_019_0577_7
crossref_primary_10_3390_ijms252011026
crossref_primary_10_1016_j_indcrop_2025_120703
crossref_primary_10_1186_s12864_022_08573_x
crossref_primary_10_3390_genes11101161
crossref_primary_10_1111_nph_17621
crossref_primary_10_1016_j_indcrop_2024_118066
crossref_primary_10_1111_pbi_13707
crossref_primary_10_3389_fpls_2023_1118339
crossref_primary_10_36953_ECJ_15402483
crossref_primary_10_1111_1755_0998_13365
crossref_primary_10_1111_pbi_13827
crossref_primary_10_1111_ppl_13797
crossref_primary_10_3390_ijms22020544
crossref_primary_10_1016_j_indcrop_2021_114307
crossref_primary_10_1016_j_ocsci_2022_10_002
crossref_primary_10_1016_j_indcrop_2021_113576
crossref_primary_10_1016_j_molp_2020_12_003
crossref_primary_10_3389_fpls_2022_1067723
crossref_primary_10_1016_j_cj_2022_01_002
crossref_primary_10_1007_s00122_021_03788_0
crossref_primary_10_1186_s12870_021_03311_z
crossref_primary_10_17221_19_2022_CJGPB
crossref_primary_10_1186_s13059_022_02801_z
crossref_primary_10_3390_genes11091046
crossref_primary_10_1111_nph_17053
crossref_primary_10_3390_plants10102186
crossref_primary_10_1186_s12870_020_02674_z
crossref_primary_10_1038_s41559_024_02593_4
crossref_primary_10_1186_s12864_020_6747_1
crossref_primary_10_1007_s00425_020_03465_4
crossref_primary_10_1111_pbi_14011
crossref_primary_10_5194_aab_63_483_2020
crossref_primary_10_1111_jipb_13244
crossref_primary_10_3390_app122110930
crossref_primary_10_1111_tpj_16491
crossref_primary_10_1002_pld3_70018
crossref_primary_10_1016_j_xplc_2023_100666
crossref_primary_10_1093_bioinformatics_btab468
crossref_primary_10_1007_s00122_023_04407_w
crossref_primary_10_1016_j_cj_2022_08_008
crossref_primary_10_3390_horticulturae9111204
crossref_primary_10_1134_S102144372004010X
crossref_primary_10_3389_fpls_2023_1153000
crossref_primary_10_1007_s00122_024_04642_9
crossref_primary_10_1016_j_gene_2020_144674
crossref_primary_10_1093_pcp_pcaa169
crossref_primary_10_1016_j_cj_2022_05_003
crossref_primary_10_3389_fpls_2022_1062952
crossref_primary_10_3390_agronomy12040814
crossref_primary_10_1007_s11032_024_01522_4
crossref_primary_10_1038_s41467_024_46271_2
crossref_primary_10_1093_nar_gkab1057
crossref_primary_10_3389_fpls_2024_1336519
crossref_primary_10_1038_s41467_024_47017_w
crossref_primary_10_1016_j_ijbiomac_2022_12_150
crossref_primary_10_3390_plants12142622
crossref_primary_10_1016_j_cell_2022_04_036
crossref_primary_10_3390_plants10112475
crossref_primary_10_3390_plants12030639
crossref_primary_10_3390_plants11192635
crossref_primary_10_1111_pbi_13472
crossref_primary_10_1186_s13068_019_1557_x
crossref_primary_10_3389_fpls_2022_862363
crossref_primary_10_1007_s00122_021_03847_6
crossref_primary_10_1038_s41559_021_01523_y
crossref_primary_10_3390_plants12183328
crossref_primary_10_1016_j_ygeno_2021_06_034
crossref_primary_10_1111_nph_19150
crossref_primary_10_1016_j_ygeno_2020_11_006
crossref_primary_10_1093_hr_uhac182
crossref_primary_10_1186_s12864_022_08701_7
crossref_primary_10_1007_s11032_023_01394_0
crossref_primary_10_1186_s12870_025_06127_3
crossref_primary_10_1016_j_lwt_2024_116101
crossref_primary_10_1093_plphys_kiab048
crossref_primary_10_1016_j_tplants_2024_04_007
crossref_primary_10_1007_s42976_021_00207_4
crossref_primary_10_3390_agronomy10050627
crossref_primary_10_1016_j_hpj_2024_01_004
crossref_primary_10_1007_s10681_021_02889_7
crossref_primary_10_1007_s10681_022_03097_7
crossref_primary_10_1094_PHYTOFR_10_20_0029_R
crossref_primary_10_1111_pce_14574
crossref_primary_10_1111_pbi_13493
crossref_primary_10_1111_pce_14690
crossref_primary_10_1111_pbi_13491
crossref_primary_10_1186_s12864_021_07762_4
crossref_primary_10_3390_ijms252312907
crossref_primary_10_1093_plcell_koac249
crossref_primary_10_3390_agronomy12071624
crossref_primary_10_5194_aab_66_357_2023
crossref_primary_10_3390_ijms251910752
crossref_primary_10_3390_plants11172241
crossref_primary_10_1139_gen_2024_0053
crossref_primary_10_1038_s41467_024_54112_5
crossref_primary_10_1016_j_ijbiomac_2025_140053
crossref_primary_10_3390_plants10061150
Cites_doi 10.1093/bioinformatics/btp324
10.17660/ActaHortic.2010.867.9
10.1371/journal.pgen.1000695
10.1038/nature11285
10.1038/nature11162
10.1186/gb-2014-15-6-r77
10.1007/BF00265606
10.1126/science.1253435
10.1111/mec.14131
10.1073/pnas.1423244112
10.1046/j.1365-313x.2001.01096.x
10.1038/ng.3748
10.1016/j.ajhg.2015.11.020
10.1038/srep19444
10.1038/nbt.2050
10.1038/nprot.2012.016
10.1007/s00122-008-0733-3
10.1038/nature02269
10.1093/molbev/msu211
10.1042/BJ20110060
10.1086/519795
10.1111/j.1744-7348.1991.tb04895.x
10.1093/nar/gkv1054
10.1186/s12864-017-3607-8
10.1093/nar/gkw290
10.1089/omi.2011.0118
10.1093/molbev/msu300
10.1105/tpc.112.108480
10.1111/j.1365-313X.2011.04887.x
10.1101/gr.107524.110
10.1101/gr.100545.109
10.1038/ng.919
10.1111/j.1365-294X.2005.02553.x
10.1038/nbt.3096
10.1007/s00122-015-2595-9
10.1007/s00122-007-0685-z
10.1186/1471-2229-10-54
10.1371/journal.pgen.1003905
10.1139/g92-152
10.1016/j.molp.2017.09.020
10.1038/ng.3807
10.1038/ng1847
10.1038/ng.3483
10.1007/s00425-011-1534-5
10.1111/tpj.13669
10.1093/bioinformatics/bts635
10.1038/ng.3117
10.1038/ng.3657
10.4161/psb.5.6.11646
10.1007/s00122-006-0269-3
10.1105/tpc.110.075564
10.1016/S0168-7972(99)80003-6
10.1093/genetics/155.2.945
10.1093/bioinformatics/btu170
ContentType Journal Article
Copyright The Author(s) 2019
This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Copyright_xml – notice: The Author(s) 2019
– notice: This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
DBID C6C
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
3V.
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7X7
7XB
88E
8AO
8FD
8FE
8FG
8FH
8FI
8FJ
8FK
ABUWG
AEUYN
AFKRA
ARAPS
AZQEC
BBNVY
BENPR
BGLVJ
BHPHI
C1K
CCPQU
DWQXO
FR3
FYUFA
GHDGH
GNUQQ
H94
HCIFZ
K9.
LK8
M0S
M1P
M7P
P5Z
P62
P64
PHGZM
PHGZT
PIMPY
PJZUB
PKEHL
PPXIY
PQEST
PQGLB
PQQKQ
PQUKI
RC3
SOI
7X8
5PM
DOA
DOI 10.1038/s41467-019-09134-9
DatabaseName Springer Nature OA Free Journals
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
ProQuest Central (Corporate)
Bacteriology Abstracts (Microbiology B)
Calcium & Calcified Tissue Abstracts
Chemoreception Abstracts
Ecology Abstracts
Entomology Abstracts (Full archive)
Environment Abstracts
Immunology Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
Nucleic Acids Abstracts
Oncogenes and Growth Factors Abstracts
Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Medical Database (Alumni Edition)
ProQuest Pharma Collection
Technology Research Database
ProQuest SciTech Collection
ProQuest Technology Collection
ProQuest Natural Science Collection
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
ProQuest Central (Alumni)
ProQuest One Sustainability (subscription)
ProQuest Central UK/Ireland
Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Biological Science Collection
ProQuest Central
Technology Collection
Natural Science Collection
Environmental Sciences and Pollution Management
ProQuest One Community College
ProQuest Central Korea
Engineering Research Database
Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
AIDS and Cancer Research Abstracts
SciTech Premium Collection
ProQuest Health & Medical Complete (Alumni)
Biological Sciences
ProQuest Health & Medical Collection
Medical Database
Biological Science Database
Advanced Technologies & Aerospace Database
ProQuest Advanced Technologies & Aerospace Collection
Biotechnology and BioEngineering Abstracts
ProQuest Central Premium
ProQuest One Academic
Publicly Available Content Database
ProQuest Health & Medical Research Collection
ProQuest One Academic Middle East (New)
ProQuest One Health & Nursing
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Applied & Life Sciences
ProQuest One Academic
ProQuest One Academic UKI Edition
Genetics Abstracts
Environment Abstracts
MEDLINE - Academic
PubMed Central (Full Participant titles)
DOAJ Directory of Open Access Journals - NZ
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
Publicly Available Content Database
ProQuest Central Student
Oncogenes and Growth Factors Abstracts
ProQuest Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Nucleic Acids Abstracts
SciTech Premium Collection
Environmental Sciences and Pollution Management
ProQuest One Applied & Life Sciences
ProQuest One Sustainability
Health Research Premium Collection
Natural Science Collection
Health & Medical Research Collection
Biological Science Collection
Chemoreception Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
ProQuest Central (New)
ProQuest Medical Library (Alumni)
Advanced Technologies & Aerospace Collection
ProQuest Biological Science Collection
ProQuest One Academic Eastern Edition
ProQuest Hospital Collection
ProQuest Technology Collection
Health Research Premium Collection (Alumni)
Biological Science Database
Ecology Abstracts
ProQuest Hospital Collection (Alumni)
Biotechnology and BioEngineering Abstracts
Entomology Abstracts
ProQuest Health & Medical Complete
ProQuest One Academic UKI Edition
Engineering Research Database
ProQuest One Academic
Calcium & Calcified Tissue Abstracts
ProQuest One Academic (New)
Technology Collection
Technology Research Database
ProQuest One Academic Middle East (New)
ProQuest Health & Medical Complete (Alumni)
ProQuest Central (Alumni Edition)
ProQuest One Community College
ProQuest One Health & Nursing
ProQuest Natural Science Collection
ProQuest Pharma Collection
ProQuest Central
ProQuest Health & Medical Research Collection
Genetics Abstracts
Health and Medicine Complete (Alumni Edition)
ProQuest Central Korea
Bacteriology Abstracts (Microbiology B)
AIDS and Cancer Research Abstracts
ProQuest SciTech Collection
Advanced Technologies & Aerospace Database
ProQuest Medical Library
Immunology Abstracts
Environment Abstracts
ProQuest Central (Alumni)
MEDLINE - Academic
DatabaseTitleList CrossRef


MEDLINE - Academic

MEDLINE
Publicly Available Content Database
Database_xml – sequence: 1
  dbid: C6C
  name: Springer Nature OA Free Journals
  url: http://www.springeropen.com/
  sourceTypes: Publisher
– sequence: 2
  dbid: DOA
  name: DOAJ Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 3
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 4
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 5
  dbid: 8FG
  name: ProQuest Technology Collection
  url: https://search.proquest.com/technologycollection1
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 2041-1723
EndPage 12
ExternalDocumentID oai_doaj_org_article_fe79e943d1f44394a6f00b1338924809
PMC6411957
30858362
10_1038_s41467_019_09134_9
Genre Research Support, Non-U.S. Gov't
Journal Article
GroupedDBID ---
0R~
39C
3V.
53G
5VS
70F
7X7
88E
8AO
8FE
8FG
8FH
8FI
8FJ
AAHBH
AAJSJ
ABUWG
ACGFO
ACGFS
ACIWK
ACMJI
ACPRK
ACSMW
ADBBV
ADFRT
ADMLS
ADRAZ
AENEX
AEUYN
AFKRA
AFRAH
AHMBA
AJTQC
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AMTXH
AOIJS
ARAPS
ASPBG
AVWKF
AZFZN
BBNVY
BCNDV
BENPR
BGLVJ
BHPHI
BPHCQ
BVXVI
C6C
CCPQU
DIK
EBLON
EBS
EE.
EMOBN
F5P
FEDTE
FYUFA
GROUPED_DOAJ
HCIFZ
HMCUK
HVGLF
HYE
HZ~
KQ8
LK8
M1P
M48
M7P
M~E
NAO
O9-
OK1
P2P
P62
PIMPY
PQQKQ
PROAC
PSQYO
RNS
RNT
RNTTT
RPM
SNYQT
SV3
TSG
UKHRP
AASML
AAYXX
CITATION
PHGZM
PHGZT
CGR
CUY
CVF
ECM
EIF
NPM
PJZUB
PPXIY
PQGLB
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7XB
8FD
8FK
AARCD
AZQEC
C1K
DWQXO
FR3
GNUQQ
H94
K9.
P64
PKEHL
PQEST
PQUKI
RC3
SOI
7X8
5PM
PUEGO
ID FETCH-LOGICAL-c606t-1044222bc7303d6d9d8ba92c8161f279568df554057e347cc8b3ece475e4825a3
IEDL.DBID M48
ISSN 2041-1723
IngestDate Wed Aug 27 01:18:09 EDT 2025
Thu Aug 21 14:10:45 EDT 2025
Fri Jul 11 04:39:27 EDT 2025
Wed Aug 13 06:44:11 EDT 2025
Mon Jul 21 05:46:49 EDT 2025
Tue Jul 01 02:21:25 EDT 2025
Thu Apr 24 22:52:19 EDT 2025
Fri Feb 21 02:38:55 EST 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Language English
License Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c606t-1044222bc7303d6d9d8ba92c8161f279568df554057e347cc8b3ece475e4825a3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
ORCID 0000-0001-8633-6290
0000-0003-2982-9675
0000-0002-9426-3615
0000-0003-1370-8633
OpenAccessLink http://journals.scholarsportal.info/openUrl.xqy?doi=10.1038/s41467-019-09134-9
PMID 30858362
PQID 2190076602
PQPubID 546298
PageCount 12
ParticipantIDs doaj_primary_oai_doaj_org_article_fe79e943d1f44394a6f00b1338924809
pubmedcentral_primary_oai_pubmedcentral_nih_gov_6411957
proquest_miscellaneous_2190491546
proquest_journals_2190076602
pubmed_primary_30858362
crossref_primary_10_1038_s41467_019_09134_9
crossref_citationtrail_10_1038_s41467_019_09134_9
springer_journals_10_1038_s41467_019_09134_9
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2019-03-11
PublicationDateYYYYMMDD 2019-03-11
PublicationDate_xml – month: 03
  year: 2019
  text: 2019-03-11
  day: 11
PublicationDecade 2010
PublicationPlace London
PublicationPlace_xml – name: London
– name: England
PublicationTitle Nature communications
PublicationTitleAbbrev Nat Commun
PublicationTitleAlternate Nat Commun
PublicationYear 2019
Publisher Nature Publishing Group UK
Nature Publishing Group
Nature Portfolio
Publisher_xml – name: Nature Publishing Group UK
– name: Nature Publishing Group
– name: Nature Portfolio
References Lin (CR13) 2014; 46
Wang (CR24) 2016; 6
Li, Durbin (CR49) 2009; 25
Wu, Wu, Xiao, Li, Lu (CR33) 2008; 116
Excoffier, Dupanloup, Huerta-Sánchez, Sousa, Foll (CR21) 2013; 9
Yu, Wang, Han, He (CR62) 2012; 16
Qi (CR46) 2017; 26
Song, Osborn, Williams (CR11) 1988; 75
Moreno-Pérez (CR40) 2012; 235
Bastow (CR38) 2004; 427
Allender, King (CR1) 2010; 10
Chalhoub (CR5) 2014; 345
Van Lijsebettens, Grasser (CR37) 2010; 5
Fu (CR31) 2012; 486
Wu, Xue (CR39) 2010; 22
Xu (CR12) 2012; 30
Chen (CR36) 2018; 1
CR2
Trapnell (CR61) 2013; 7
Song, Osborn (CR10) 1992; 35
Cheng (CR18) 2016; 48
CR8
CR7
Purcell (CR55) 2007; 81
Bolger, Lohse, Usadel (CR48) 2014; 30
Liu (CR16) 2014; 5
Ignatov, Artemyeva, Hida (CR44) 2010; 867
Terhorst, Kamm, Song (CR22) 2017; 49
Nour-Eldin (CR32) 2012; 488
Zou (CR43) 2013; 449
Pritchard, Stephens, Donnelly (CR54) 2000; 155
Yang (CR6) 2016; 48
Frey (CR30) 2012; 70
Qian (CR9) 2006; 113
Liu (CR41) 2015; 112
Sun (CR4) 2017; 92
Gonzalez-Grandio (CR42) 2013; 25
Iuchi (CR29) 2001; 27
Dobin (CR60) 2013; 29
Browning, Browning (CR25) 2016; 98
Bouché, Lobet, Tocquin, Périlleux (CR34) 2016; 44
Reiner, Holzner, Ebermann (CR45) 1995; 4
Lancashire (CR56) 1991; 119
Browning, Browning (CR59) 2016; 98
Hasan (CR23) 2008; 116
Qu (CR26) 2017; 18
Price (CR52) 2006; 38
Letunic, Bork (CR51) 2016; 44
Evanno, Regnaut, Goudet (CR53) 2005; 14
Szpiech, Hernandez (CR58) 2014; 31
McKenna (CR50) 2010; 20
Lu (CR27) 2017; 8
Wang (CR15) 2011; 43
Wang (CR47) 2017; 49
Liu (CR28) 2016; 129
Zhou (CR14) 2015; 33
Nagaharu (CR3) 1935; 7
Nguyen, Schmidt, von Haeseler, Minh (CR19) 2015; 32
Whittaker, Dean (CR35) 2017; 338
Gutenkunst, Hernandez, Williamson, Bustamante (CR20) 2009; 5
Chen, Patterson, Reich (CR57) 2010; 20
Parkin (CR17) 2014; 15
G Yu (9134_CR62) 2012; 16
HF Zou (9134_CR43) 2013; 449
J Terhorst (9134_CR22) 2017; 49
Z Zhou (9134_CR14) 2015; 33
AL Price (9134_CR52) 2006; 38
M Wang (9134_CR47) 2017; 49
9134_CR2
C Whittaker (9134_CR35) 2017; 338
H Reiner (9134_CR45) 1995; 4
GZ Wu (9134_CR39) 2010; 22
RN Gutenkunst (9134_CR20) 2009; 5
SB Wang (9134_CR24) 2016; 6
ZQ Fu (9134_CR31) 2012; 486
L Excoffier (9134_CR21) 2013; 9
G Wu (9134_CR33) 2008; 116
H Li (9134_CR49) 2009; 25
9134_CR7
9134_CR8
CJ Allender (9134_CR1) 2010; 10
L Chen (9134_CR36) 2018; 1
S Purcell (9134_CR55) 2007; 81
S Iuchi (9134_CR29) 2001; 27
J Yang (9134_CR6) 2016; 48
AM Bolger (9134_CR48) 2014; 30
F Cheng (9134_CR18) 2016; 48
A McKenna (9134_CR50) 2010; 20
I Letunic (9134_CR51) 2016; 44
LT Nguyen (9134_CR19) 2015; 32
X Qi (9134_CR46) 2017; 26
KM Song (9134_CR11) 1988; 75
U Nagaharu (9134_CR3) 1935; 7
C Trapnell (9134_CR61) 2013; 7
BL Browning (9134_CR59) 2016; 98
XX Wang (9134_CR15) 2011; 43
C Qu (9134_CR26) 2017; 18
AJ Moreno-Pérez (9134_CR40) 2012; 235
A Frey (9134_CR30) 2012; 70
K Lu (9134_CR27) 2017; 8
S Liu (9134_CR28) 2016; 129
JK Pritchard (9134_CR54) 2000; 155
W Qian (9134_CR9) 2006; 113
K Song (9134_CR10) 1992; 35
R Bastow (9134_CR38) 2004; 427
X Xu (9134_CR12) 2012; 30
A Dobin (9134_CR60) 2013; 29
M Van Lijsebettens (9134_CR37) 2010; 5
F Sun (9134_CR4) 2017; 92
F Bouché (9134_CR34) 2016; 44
HH Nour-Eldin (9134_CR32) 2012; 488
AN Ignatov (9134_CR44) 2010; 867
ZA Szpiech (9134_CR58) 2014; 31
M Hasan (9134_CR23) 2008; 116
S Liu (9134_CR16) 2014; 5
G Evanno (9134_CR53) 2005; 14
E Gonzalez-Grandio (9134_CR42) 2013; 25
T Lin (9134_CR13) 2014; 46
H Chen (9134_CR57) 2010; 20
BL Browning (9134_CR25) 2016; 98
J Liu (9134_CR41) 2015; 112
PD Lancashire (9134_CR56) 1991; 119
IA Parkin (9134_CR17) 2014; 15
B Chalhoub (9134_CR5) 2014; 345
References_xml – volume: 25
  start-page: 1754
  year: 2009
  end-page: 1760
  ident: CR49
  article-title: Fast and accurate short read alignment with Burrows-Wheeler transform
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
– volume: 867
  start-page: 81
  year: 2010
  end-page: 88
  ident: CR44
  article-title: Origin and expansion of cultivated in Eurasia: linguistic facts
  publication-title: Acta Hortic.
  doi: 10.17660/ActaHortic.2010.867.9
– volume: 5
  start-page: e1000695
  year: 2009
  ident: CR20
  article-title: Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1000695
– volume: 488
  start-page: 531
  year: 2012
  end-page: 534
  ident: CR32
  article-title: NRT/PTR transporters are essential for translocation of glucosinolate defence compounds to seeds
  publication-title: Nature
  doi: 10.1038/nature11285
– volume: 486
  start-page: 228
  year: 2012
  end-page: 232
  ident: CR31
  article-title: NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants
  publication-title: Nature
  doi: 10.1038/nature11162
– volume: 7
  start-page: 389
  year: 1935
  end-page: 452
  ident: CR3
  article-title: Genome analysis in with special reference to the experimental formation of and peculiar mode of fertilization
  publication-title: Jpn J. Bot.
– volume: 15
  year: 2014
  ident: CR17
  article-title: Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid
  publication-title: Genome Biol.
  doi: 10.1186/gb-2014-15-6-r77
– volume: 75
  start-page: 784
  year: 1988
  end-page: 794
  ident: CR11
  article-title: Brassica taxonomy based on nuclear restriction fragment length polymorphisms (RFLPs)
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/BF00265606
– ident: CR8
– volume: 345
  start-page: 950
  year: 2014
  end-page: 953
  ident: CR5
  article-title: Early allopolyploid evolution in the post-Neolithic oilseed genome
  publication-title: Science
  doi: 10.1126/science.1253435
– volume: 26
  start-page: 3373
  year: 2017
  end-page: 3388
  ident: CR46
  article-title: Genomic inferences of domestication events are corroborated by written records in
  publication-title: Mol. Ecol.
  doi: 10.1111/mec.14131
– volume: 112
  start-page: 5123
  year: 2015
  end-page: 5132
  ident: CR41
  article-title: Natural variation in gene simultaneously affects seed weight and silique length in polyploid rapeseed
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1423244112
– volume: 27
  start-page: 325
  year: 2001
  end-page: 333
  ident: CR29
  article-title: Regulation of drought tolerance by gene manipulation of 9- -epoxycarotenoid dioxygenase, a key enzyme in abscisic acid biosynthesis in
  publication-title: Plant J.
  doi: 10.1046/j.1365-313x.2001.01096.x
– volume: 49
  start-page: 303
  year: 2017
  end-page: 309
  ident: CR22
  article-title: Robust and scalable inference of population history from hundreds of unphased whole genomes
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3748
– volume: 98
  start-page: 116
  year: 2016
  end-page: 126
  ident: CR59
  article-title: Genotype imputation with millions of reference samples
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2015.11.020
– volume: 6
  year: 2016
  ident: CR24
  article-title: Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodology
  publication-title: Sci. Rep.
  doi: 10.1038/srep19444
– volume: 98
  start-page: 116
  year: 2016
  end-page: 126
  ident: CR25
  article-title: Genotype imputation with millions of reference samples
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2015.11.020
– volume: 30
  start-page: 105
  year: 2012
  end-page: 111
  ident: CR12
  article-title: Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.2050
– volume: 7
  start-page: 562
  year: 2013
  end-page: 578
  ident: CR61
  article-title: Differential gene and transcript expression analysis of RNA-seq experiments with topHat and cufflinks
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2012.016
– volume: 116
  start-page: 1035
  year: 2008
  end-page: 1049
  ident: CR23
  article-title: Association of gene-linked SSR markers to seed glucosinolate content in oilseed rape ( ssp. )
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-008-0733-3
– volume: 427
  start-page: 164
  year: 2004
  end-page: 167
  ident: CR38
  article-title: Vernalization requires epigenetic silencing of FLC by histone methylation
  publication-title: Nature
  doi: 10.1038/nature02269
– volume: 31
  start-page: 2824
  year: 2014
  end-page: 2827
  ident: CR58
  article-title: Selscan: an efficient multithreaded program to perform EHH-based scans for positive selection
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu211
– volume: 449
  start-page: 373
  year: 2013
  end-page: 388
  ident: CR43
  article-title: The transcription factor AtDOF4.2 regulates shoot branching and seed coat formation in Arabidopsis
  publication-title: Biochem. J.
  doi: 10.1042/BJ20110060
– volume: 81
  start-page: 559
  year: 2007
  end-page: 575
  ident: CR55
  article-title: PLINK: A tool set for whole-genome association and population-based linkage analyses
  publication-title: Am. J. Hum. Genet.
  doi: 10.1086/519795
– volume: 119
  start-page: 561
  year: 1991
  end-page: 601
  ident: CR56
  article-title: A uniform decimal code for growth stages of crops and weeds
  publication-title: Ann. Appl. Biol.
  doi: 10.1111/j.1744-7348.1991.tb04895.x
– volume: 44
  start-page: D1167
  year: 2016
  end-page: D1171
  ident: CR34
  article-title: FLOR-ID: an interactive database of flowering-time gene networks in
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkv1054
– volume: 18
  year: 2017
  ident: CR26
  article-title: Genome-wide association mapping and Identification of candidate genes for fatty acid composition in L. using SNP markers
  publication-title: BMC Genom.
  doi: 10.1186/s12864-017-3607-8
– volume: 44
  start-page: W242
  year: 2016
  end-page: W245
  ident: CR51
  article-title: Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkw290
– volume: 16
  start-page: 284
  year: 2012
  end-page: 287
  ident: CR62
  article-title: clusterProfiler: an R package for comparing biological themes among gene clusters
  publication-title: OMICS
  doi: 10.1089/omi.2011.0118
– volume: 155
  start-page: 945
  year: 2000
  end-page: 959
  ident: CR54
  article-title: Inference of population structure using multilocus genotype data
  publication-title: Genetics
– volume: 32
  start-page: 268
  year: 2015
  end-page: 274
  ident: CR19
  article-title: IQ-TREE: a fast and effective stochastic algorithm for estimating Maximum-Likelihood phylogenies
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu300
– volume: 25
  start-page: 834
  year: 2013
  end-page: 850
  ident: CR42
  article-title: BRANCHED1 promotes axillary bud dormancy in response to shade in
  publication-title: Plant Cell
  doi: 10.1105/tpc.112.108480
– volume: 70
  start-page: 501
  year: 2012
  end-page: 512
  ident: CR30
  article-title: Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members
  publication-title: Plant J.
  doi: 10.1111/j.1365-313X.2011.04887.x
– volume: 20
  start-page: 1297
  year: 2010
  end-page: 1303
  ident: CR50
  article-title: The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
– volume: 20
  start-page: 393
  year: 2010
  end-page: 402
  ident: CR57
  article-title: Population differentiation as a test for selective sweeps
  publication-title: Genome Res.
  doi: 10.1101/gr.100545.109
– ident: CR2
– volume: 43
  start-page: 1035
  year: 2011
  end-page: 1039
  ident: CR15
  article-title: The genome of the mesopolyploid crop species
  publication-title: Nat. Genet.
  doi: 10.1038/ng.919
– volume: 14
  start-page: 2611
  year: 2005
  end-page: 2620
  ident: CR53
  article-title: Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
  publication-title: Mol. Ecol.
  doi: 10.1111/j.1365-294X.2005.02553.x
– volume: 33
  start-page: 408
  year: 2015
  end-page: 414
  ident: CR14
  article-title: Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3096
– volume: 129
  start-page: 1
  year: 2016
  end-page: 13
  ident: CR28
  article-title: A genome-wide association study reveals novel elite allelic variations in seed oil content of
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-015-2595-9
– volume: 116
  start-page: 491
  year: 2008
  end-page: 499
  ident: CR33
  article-title: Zero erucic acid trait of rapeseed ( L.) results from a deletion of four base pairs in the fatty acid elongase 1 gene
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-007-0685-z
– volume: 10
  year: 2010
  ident: CR1
  article-title: Origins of the amphiploid species L. investigated by chloroplast and nuclear molecular markers
  publication-title: BMC Plant Biol.
  doi: 10.1186/1471-2229-10-54
– volume: 9
  start-page: e1003905
  year: 2013
  ident: CR21
  article-title: Robust demographic inference from genomic and SNP data
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1003905
– volume: 30
  start-page: 2114
  year: 2014
  end-page: 2120
  ident: CR48
  article-title: Trimmomatic: a flexible trimmer for Illumina sequence data
  publication-title: Bioinformatics
– volume: 35
  start-page: 992
  year: 1992
  end-page: 1001
  ident: CR10
  article-title: Polyphyletic origins of : new evidence based on organelle and nuclear RFLP analyses
  publication-title: Genome
  doi: 10.1139/g92-152
– volume: 8
  start-page: 206
  year: 2017
  ident: CR27
  article-title: Genome-wide association and transcriptome analyses reveal candidate genes underlying yield-determining traits in
  publication-title: Front. Plant Sci.
– volume: 5
  start-page: 1
  year: 2014
  end-page: 11
  ident: CR16
  article-title: The genome reveals the asymmetrical evolution of polyploid genomes
  publication-title: Nat. Commun.
– volume: 1
  start-page: 222
  year: 2018
  end-page: 225
  ident: CR36
  article-title: A 2.833-kb insertion in and its homeologous exchange with during breeding selection generated early-flowering rapeseed
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2017.09.020
– volume: 49
  start-page: 579
  year: 2017
  end-page: 587
  ident: CR47
  article-title: Asymmetric subgenome selection and -regulatory divergence during cotton domestication
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3807
– volume: 38
  start-page: 904
  year: 2006
  end-page: 909
  ident: CR52
  article-title: Principal components analysis corrects for stratification in genome-wide association studies
  publication-title: Nat. Genet.
  doi: 10.1038/ng1847
– volume: 48
  start-page: 1
  year: 2016
  end-page: 10
  ident: CR18
  article-title: Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in and
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3483
– volume: 235
  start-page: 629
  year: 2012
  end-page: 639
  ident: CR40
  article-title: Reduced expression of FatA thioesterases in affects the oil content and fatty acid composition of the seeds
  publication-title: Planta
  doi: 10.1007/s00425-011-1534-5
– volume: 92
  start-page: 452
  year: 2017
  end-page: 468
  ident: CR4
  article-title: The high-quality genome of cultivar ‘ZS11’ reveals the introgression history in semi-winter morphotype
  publication-title: Plant J.
  doi: 10.1111/tpj.13669
– volume: 29
  start-page: 15
  year: 2013
  end-page: 21
  ident: CR60
  article-title: STAR: ultrafast universal RNA-seq aligner
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts635
– volume: 4
  start-page: 1066
  year: 1995
  end-page: 1069
  ident: CR45
  article-title: The development of turnip-type and oilseed-type crops from the wild type in Europe-An overview of botanical, historical and linguistic facts
  publication-title: Proc. 9th Int. Rapeseed Congr.
– ident: CR7
– volume: 46
  start-page: 1220
  year: 2014
  end-page: 1226
  ident: CR13
  article-title: Genomic analyses provide insights into the history of tomato breeding
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3117
– volume: 48
  start-page: 1225
  year: 2016
  end-page: 1232
  ident: CR6
  article-title: The genome sequence of allopolyploid and analysis of differential homoeolog gene expression influencing selection
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3657
– volume: 5
  start-page: 715
  year: 2010
  end-page: 717
  ident: CR37
  article-title: The role of the transcript elongation factors FACT and HUB1 in leaf growth and the induction of flowering
  publication-title: Plant Signal. Behav.
  doi: 10.4161/psb.5.6.11646
– volume: 113
  start-page: 49
  year: 2006
  end-page: 54
  ident: CR9
  article-title: Introgression of genomic components from Chinese contributes to widening the genetic diversity in rapeseed ( L.), with emphasis on the evolution of Chinese rapeseed
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-006-0269-3
– volume: 338
  start-page: 1
  year: 2017
  end-page: 8
  ident: CR35
  article-title: The FLC Locus: a platform for discoveries in epigenetics and adaptation changes may still occur before final publication
  publication-title: Annu. Rev. Cell Dev. Biol.
– volume: 22
  start-page: 3726
  year: 2010
  end-page: 3744
  ident: CR39
  article-title: β-ketoacyl-[acyl carrier protein] synthase I is crucial for fatty acid synthesis and plays a role in chloroplast division and embryo development
  publication-title: Plant Cell
  doi: 10.1105/tpc.110.075564
– volume: 29
  start-page: 15
  year: 2013
  ident: 9134_CR60
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts635
– volume: 449
  start-page: 373
  year: 2013
  ident: 9134_CR43
  publication-title: Biochem. J.
  doi: 10.1042/BJ20110060
– volume: 116
  start-page: 1035
  year: 2008
  ident: 9134_CR23
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-008-0733-3
– volume: 486
  start-page: 228
  year: 2012
  ident: 9134_CR31
  publication-title: Nature
  doi: 10.1038/nature11162
– volume: 15
  year: 2014
  ident: 9134_CR17
  publication-title: Genome Biol.
  doi: 10.1186/gb-2014-15-6-r77
– volume: 5
  start-page: e1000695
  year: 2009
  ident: 9134_CR20
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1000695
– volume: 48
  start-page: 1
  year: 2016
  ident: 9134_CR18
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3483
– volume: 92
  start-page: 452
  year: 2017
  ident: 9134_CR4
  publication-title: Plant J.
  doi: 10.1111/tpj.13669
– volume: 98
  start-page: 116
  year: 2016
  ident: 9134_CR59
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2015.11.020
– volume: 235
  start-page: 629
  year: 2012
  ident: 9134_CR40
  publication-title: Planta
  doi: 10.1007/s00425-011-1534-5
– volume: 427
  start-page: 164
  year: 2004
  ident: 9134_CR38
  publication-title: Nature
  doi: 10.1038/nature02269
– volume: 112
  start-page: 5123
  year: 2015
  ident: 9134_CR41
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1423244112
– volume: 25
  start-page: 1754
  year: 2009
  ident: 9134_CR49
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
– volume: 9
  start-page: e1003905
  year: 2013
  ident: 9134_CR21
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1003905
– volume: 8
  start-page: 206
  year: 2017
  ident: 9134_CR27
  publication-title: Front. Plant Sci.
– volume: 16
  start-page: 284
  year: 2012
  ident: 9134_CR62
  publication-title: OMICS
  doi: 10.1089/omi.2011.0118
– volume: 338
  start-page: 1
  year: 2017
  ident: 9134_CR35
  publication-title: Annu. Rev. Cell Dev. Biol.
– volume: 38
  start-page: 904
  year: 2006
  ident: 9134_CR52
  publication-title: Nat. Genet.
  doi: 10.1038/ng1847
– volume: 44
  start-page: D1167
  year: 2016
  ident: 9134_CR34
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkv1054
– volume: 345
  start-page: 950
  year: 2014
  ident: 9134_CR5
  publication-title: Science
  doi: 10.1126/science.1253435
– volume: 81
  start-page: 559
  year: 2007
  ident: 9134_CR55
  publication-title: Am. J. Hum. Genet.
  doi: 10.1086/519795
– ident: 9134_CR7
  doi: 10.1016/S0168-7972(99)80003-6
– volume: 867
  start-page: 81
  year: 2010
  ident: 9134_CR44
  publication-title: Acta Hortic.
  doi: 10.17660/ActaHortic.2010.867.9
– volume: 30
  start-page: 105
  year: 2012
  ident: 9134_CR12
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.2050
– volume: 488
  start-page: 531
  year: 2012
  ident: 9134_CR32
  publication-title: Nature
  doi: 10.1038/nature11285
– volume: 25
  start-page: 834
  year: 2013
  ident: 9134_CR42
  publication-title: Plant Cell
  doi: 10.1105/tpc.112.108480
– ident: 9134_CR2
– volume: 10
  year: 2010
  ident: 9134_CR1
  publication-title: BMC Plant Biol.
  doi: 10.1186/1471-2229-10-54
– volume: 22
  start-page: 3726
  year: 2010
  ident: 9134_CR39
  publication-title: Plant Cell
  doi: 10.1105/tpc.110.075564
– volume: 7
  start-page: 389
  year: 1935
  ident: 9134_CR3
  publication-title: Jpn J. Bot.
– volume: 49
  start-page: 303
  year: 2017
  ident: 9134_CR22
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3748
– volume: 4
  start-page: 1066
  year: 1995
  ident: 9134_CR45
  publication-title: Proc. 9th Int. Rapeseed Congr.
– volume: 46
  start-page: 1220
  year: 2014
  ident: 9134_CR13
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3117
– volume: 43
  start-page: 1035
  year: 2011
  ident: 9134_CR15
  publication-title: Nat. Genet.
  doi: 10.1038/ng.919
– volume: 5
  start-page: 715
  year: 2010
  ident: 9134_CR37
  publication-title: Plant Signal. Behav.
  doi: 10.4161/psb.5.6.11646
– volume: 113
  start-page: 49
  year: 2006
  ident: 9134_CR9
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-006-0269-3
– volume: 119
  start-page: 561
  year: 1991
  ident: 9134_CR56
  publication-title: Ann. Appl. Biol.
  doi: 10.1111/j.1744-7348.1991.tb04895.x
– volume: 35
  start-page: 992
  year: 1992
  ident: 9134_CR10
  publication-title: Genome
  doi: 10.1139/g92-152
– volume: 116
  start-page: 491
  year: 2008
  ident: 9134_CR33
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-007-0685-z
– volume: 44
  start-page: W242
  year: 2016
  ident: 9134_CR51
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkw290
– volume: 70
  start-page: 501
  year: 2012
  ident: 9134_CR30
  publication-title: Plant J.
  doi: 10.1111/j.1365-313X.2011.04887.x
– volume: 14
  start-page: 2611
  year: 2005
  ident: 9134_CR53
  publication-title: Mol. Ecol.
  doi: 10.1111/j.1365-294X.2005.02553.x
– volume: 75
  start-page: 784
  year: 1988
  ident: 9134_CR11
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/BF00265606
– volume: 6
  year: 2016
  ident: 9134_CR24
  publication-title: Sci. Rep.
  doi: 10.1038/srep19444
– volume: 20
  start-page: 1297
  year: 2010
  ident: 9134_CR50
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
– volume: 7
  start-page: 562
  year: 2013
  ident: 9134_CR61
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2012.016
– volume: 5
  start-page: 1
  year: 2014
  ident: 9134_CR16
  publication-title: Nat. Commun.
– volume: 18
  year: 2017
  ident: 9134_CR26
  publication-title: BMC Genom.
  doi: 10.1186/s12864-017-3607-8
– volume: 27
  start-page: 325
  year: 2001
  ident: 9134_CR29
  publication-title: Plant J.
  doi: 10.1046/j.1365-313x.2001.01096.x
– volume: 1
  start-page: 222
  year: 2018
  ident: 9134_CR36
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2017.09.020
– volume: 31
  start-page: 2824
  year: 2014
  ident: 9134_CR58
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu211
– volume: 155
  start-page: 945
  year: 2000
  ident: 9134_CR54
  publication-title: Genetics
  doi: 10.1093/genetics/155.2.945
– volume: 20
  start-page: 393
  year: 2010
  ident: 9134_CR57
  publication-title: Genome Res.
  doi: 10.1101/gr.100545.109
– ident: 9134_CR8
– volume: 33
  start-page: 408
  year: 2015
  ident: 9134_CR14
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3096
– volume: 48
  start-page: 1225
  year: 2016
  ident: 9134_CR6
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3657
– volume: 26
  start-page: 3373
  year: 2017
  ident: 9134_CR46
  publication-title: Mol. Ecol.
  doi: 10.1111/mec.14131
– volume: 129
  start-page: 1
  year: 2016
  ident: 9134_CR28
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-015-2595-9
– volume: 30
  start-page: 2114
  year: 2014
  ident: 9134_CR48
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btu170
– volume: 32
  start-page: 268
  year: 2015
  ident: 9134_CR19
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msu300
– volume: 98
  start-page: 116
  year: 2016
  ident: 9134_CR25
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2015.11.020
– volume: 49
  start-page: 579
  year: 2017
  ident: 9134_CR47
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3807
SSID ssj0000391844
Score 2.6661751
Snippet Brassica napus (2 n  = 4 x  = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2 n  = 2 x  = 20, AA) and...
Brassica napus (2n = 4x = 38, AACC) is an important allopolyploid crop derived from interspecific crosses between Brassica rapa (2n = 2x = 20, AA) and Brassica...
Brassica napus is a globally important oil crop, but the origin of the allotetraploid genome and its improvement process are largely unknown. Here, the authors...
SourceID doaj
pubmedcentral
proquest
pubmed
crossref
springer
SourceType Open Website
Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 1154
SubjectTerms 38/91
45/23
45/43
45/47
45/77
49/39
631/208/205/2138
631/449/2492
631/449/2669
631/61/447/8
Acclimatization - genetics
Brassica
Brassica napus
Brassica napus - genetics
Brassica rapa
Brassica rapa - genetics
Broccoli
Chromosomes, Plant
Ecotype
Gene expression
Gene Expression Profiling
Genes
Genetic improvement
Genetic Loci
Genetic Speciation
Genome, Plant - genetics
Genome-wide association studies
Genomes
Humanities and Social Sciences
Interspecific
multidisciplinary
Plant Breeding
Rape plants
Science
Science (multidisciplinary)
Seeds - genetics
Whole Genome Sequencing
SummonAdditionalLinks – databaseName: DOAJ Directory of Open Access Journals - NZ
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1LT9wwEB4hJCQuqFAKKQ-5Erc2IomdxD4CAqFK7QkEN8uviEhtQOxupf77ztjZhW0LvfS2SpyV5Xn4G4_nG4Ajh9Ea0arkRvAqF3TQpITleS1b19ggHa-p3vnL1-byWny-rW-ftfqiO2GJHjgt3HEXWhWU4L7sBFVxmqYrCkuRFUYOMpXu4Z73LJiKPpgrDF3EWCVTcHk8EdEnFFSzQ9nmXC3tRJGw_28o88_Lkr9lTONGdPEGNkYEyU7SzDdhJQxbsJZ6Sv58C_6GOt7mxL36PTAqLop3pfGvGLE1obax00dEzCgcNpiH2YSl3ljMDJ7hV1TUyHCH61k_oOv6ETz-YP10wvp4_hCPE7fh-uL86uwyH1sp5A4jlCk6W0FnPdahQXPfeOWlNapyEgFfV7VUM-i7OqK3wEXrnLQ8uCDaOgiMIQ1_B6vD_RB2gVluauMdL0PbCAznqGM6j1dRC-NsITMo58uq3cgzTu0uvumY7-ZSJ1FoFIWOotAqg4-Lbx4Sy8aro09JWouRxJAdH6De6FFv9L_0JoP9uaz1aLYTje6bUpNNUWXwYfEaDY6yKGYI97M0RihEnk0GO0k1FjPhCGAlQoIM2iWlWZrq8puhv4uk3o0g8r02g09z9Xqa1stL8f5_LMUerFfRLnhelvuwOn2chQOEWlN7GK3qF_wEINQ
  priority: 102
  providerName: Directory of Open Access Journals
– databaseName: ProQuest Technology Collection
  dbid: 8FG
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwEB5BERIXxJuUgozEDawmsZM4J0QRS4UEJyp6s_wKRILsstlF6r9nxvGmWh69rTZO5GQenuc3AC8cemsEq8KNFCWXFGhqpRW8Uo2rbVBOVNTv_PFTfXomP5xX5yngNqayyp1OjIraLx3FyI9RsihrVOfl69VPTlOjKLuaRmhchxsFnjRU0qUW7-cYC6GfKylTr0wu1PEoo2bIqXOHcs683TuPImz_v2zNv0sm_8ibxuNocQduJzuSvZkIfxeuheEe3JwmS17cB_-F5t5yQmD9ERi1GMWKaXwUI8wm5Dl2ska7GUnEBrPajmyakMXM4BneRa2NDM-5nvUDKrBfweMP1m9G1scoRAwqPoCzxbvPb095GqjAHfopG1S5kiI-1qFYC1_71itr2tIpNPu6sqHOQd9V0YYLQjbOKSuCC7KpgkRP0oiHcDAsh_AYmBWmMt6JIjS1RKeO5qaLWJCaG2dzlUGx-6zaJbRxGnrxXcest1B6IoVGUuhICt1m8HK-ZzVhbVy5-oSoNa8knOz4x3L9VSex011o2tBK4YtOUg-wqbs8t-SXo9-pcnzI0Y7WOgnvqC9ZLYPn82UUO8qlmCEst9Ma2aL9WWfwaGKNeScCzViFhkEGzR7T7G11_8rQf4vQ3rUkCL4mg1c79rrc1v8_xeHVb_EEbpWR4wUviiM42Ky34SmaUhv7LMrLb9sWGYw
  priority: 102
  providerName: ProQuest
– databaseName: Springer Nature HAS Fully OA
  dbid: AAJSJ
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1Ja90wEB6yEMildElSt2lRILfWxLZkWz6-lIbwoL0kobkJbU4MqV94S6H_vjPyUl6WQm_GlozQzEizfgNwbNFaI1iVWAuexYIcTZUwPM5laQvjpeU51Tt_-16cX4npdX69AdlQCxOS9gOkZTimh-ywk4UIIp1QyQ0Fi-NqE7YJqh15e3symV5MR88KYZ5LIfoKmYTLJyav3UIBrP8pDfNxouSDaGm4hM5ewotee2STbr2vYMO3r2Gn6yf5-w24H9TtNibc1Z-eUWFRyJPGXzFCakJOY6dz1JaRMKzV96sF6_piMd06hrOooJHh7dawpsVj65d3-MCa5YI1wfcQXIl7cHX29fLLedy3UYgtWidLPGgF-XmMRWHmrnCVk0ZXmZWo7NVZSfWCrs6D5ua5KK2VhnvrRZl7gfaj5vuw1c5a_xaY4TrXzvLUl4VAU466pfOQhppoaxIZQTpsq7I9xji1urhTIdbNpepIoZAUKpBCVRF8Gufcdwgb_xx9StQaRxI6dngxm9-onltU7cvKV4K7tBZU-auLOkkMWeNobcoEf3I40Fr1IrtQeHRTWLJIsgiOxs8obBRB0a2frboxokKts4jgoGONcSUclVeJ6kAE5RrTrC11_Uvb3AZA70IQ8F4ZweeBvf4u6_mtePd_w9_DbhYkgMdpeghby_nKf0CFamk-9hL0B9oCGNE
  priority: 102
  providerName: Springer Nature
Title Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement
URI https://link.springer.com/article/10.1038/s41467-019-09134-9
https://www.ncbi.nlm.nih.gov/pubmed/30858362
https://www.proquest.com/docview/2190076602
https://www.proquest.com/docview/2190491546
https://pubmed.ncbi.nlm.nih.gov/PMC6411957
https://doaj.org/article/fe79e943d1f44394a6f00b1338924809
Volume 10
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3db9MwED_tQ0i8IL7JGJWReINAEjux84BQW61MlTYhoKJvluM4I9JIt34g9t9z56RFhcITL0mU2JF157N_d-e7A3hhUVujtCqhETwJBRmaclHwMFXSZoVTlqcU73x2np1OxHiaTvdgXe6oI-Bip2pH9aQm88vXP65v3qHAv21DxtWbhfDiHlE4DjmSw3wfDnFnklTR4KyD-35l5jkqNKKLndnddWt_8mn8d2HPP49Q_uZH9dvT6C7c6XAl67cT4R7sueY-3GorTd48gPIL1cENKSPrN8co5MifoMZfMcrhhLRggzniaGQZa8zVasHailnMNCXDXhTqyHDfq1nd4IL23ZX4wOrlgtXeKuGNjA9hMjr5PDwNuwILoUW9ZYlLsCALUGFRzHmZlXmpCpMnViEMrBJJkYRllXpM57iQ1qqCO-uETJ1AzdLwR3DQzBr3BFjBTWpKy2MnM4FKHtVR5_6AamRsEakA4jVZte2yj1MRjEvtveBc6ZYVGlmhPSt0HsDLTZ-rNvfGP1sPiFublpQ327-YzS90J4a6cjJ3ueBlXAmKCTZZFUUF6emoh6oIf3K85rVez0WNizo5LLMoCeD55jOKIflWTONmq7aNyBGPZgE8bqfGZiQcYa1CoBCA3Jo0W0Pd_tLUX32q70xQSj4ZwKv19Po1rL-T4uh_kOIp3E68XPAwjo_hYDlfuWcIwJZFD_blVOJVjd734LDfH38a431wcv7hI74dZsOeN230vPT9BA8LL_Q
linkProvider Scholars Portal
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB6VIgQXxJtAASPBCaImsZM4B4QosGzp49SK3lzHdmikkl02u6D-KX4jM06y1fLorbfVxrEczzfjeXhmAF4YtNaorEqoBU9CQY6mQpQ8TGVustJJw1PKd97bz8aH4vNRerQGv4ZcGLpWOchEL6jtxJCPfBM5i6JGWZS8nX4PqWsURVeHFhodLHbc2U802do32x-Qvi-TZPTx4P047LsKhAaV9TnKHUFuj9IgtrnNbGFlqYvESNR9qiSn9DlbpV6RcVzkxsiSO-NEnjqB5pTmOO8VuCo4nuSUmT76tPTpULV1KUSfmxNxudkKL4kiyhSiGHdYrJx_vk3Av3Tbv69o_hGn9cff6Bbc7PVW9q4D2m1Yc80duNZ1sjy7C_YL9dkNqeLrN8copcnf0MapGNWIQoyzrRnq6QgJ1ujpomVdRy6mG8vwLUqlZHiu1qxuUGD-cBZ_sHrestp7PbwT8x4cXspW34f1ZtK4h8BKrlNtDY9dngk0IqlPO_cXYCNtykgGEA_bqkxf3ZyabJwqH2XnUnWkUEgK5UmhigBeLd-ZdrU9Lhy9RdRajqS63P6Pyeyr6tlcVS4vXCG4jStBOcc6q6KoJD8A2rkywkk2BlqrXli06hzaATxfPkY2p9iNbtxk0Y0RBeq7WQAPOmgsV8JRbZaoiASQr4BmZamrT5r6xJcSzwSV_MsDeD3A63xZ_9-KRxd_xTO4Pj7Y21W72_s7j-FG4tHPwzjegPX5bOGeoBo3L5963mFwfNnM-htq1VTO
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB6VrUBcEG8CBYwEJ4g2iZ3EOSDE0q5aCqsKUdGb6zgOjVSyyz5A_Wv8OmacR7U8eutttXEsx_PwNzOeGYDnBq01Kqvia8EjX5CjKRM592OZmiS30vCY8p0_TpLdQ_H-KD7agF9dLgxdq-x0olPUxdSQj3yIkkVRoySIhmV7LeJge_xm9t2nDlIUae3aaTQssm_PfqL5tni9t420fhFF453P73b9tsOAbxC4L1EHCXKB5Ab5nBdJkRUy11lkJOKgMkopla4oYwdqLBepMTLn1liRxlagaaU5znsFNlOyigawOdqZHHzqPTxUe10K0WbqBFwOF8LppYDyhiji7Wdrp6FrGvAvpPv3hc0_orbuMBzfhBstimVvG7a7BRu2vg1Xm76WZ3eg-EJdd32q__rNMkpwcve1cSpGFaOQ49lojqgdGYTVerZasKY_F9N1wfAtSqxkeMpWrKpRff6wBf5g1XLBKucDcS7Nu3B4KZt9Dwb1tLYPgOVcx7owPLRpItCkpK7t3F2HDbTJA-lB2G2rMm2tc2q5capczJ1L1ZBCISmUI4XKPHjZvzNrKn1cOHpE1OpHUpVu98d0_lW1Qq9Km2Y2E7wIS0EZyDopgyAnrwBavTLASbY6WqtWdSzUOaN78Kx_jEJPkRxd2-mqGSMyRL-JB_cb1uhXwhFES4QlHqRrTLO21PUndXXiCosnggoAph686tjrfFn_34qHF3_FU7iGgqo-7E32H8H1yDE_98NwCwbL-co-Rky3zJ-0wsPg-LLl9TdF-1pg
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Whole-genome+resequencing+reveals+Brassica+napus+origin+and+genetic+loci+involved+in+its+improvement&rft.jtitle=Nature+communications&rft.au=Kun+Lu&rft.au=Lijuan+Wei&rft.au=Xiaolong+Li&rft.au=Yuntong+Wang&rft.date=2019-03-11&rft.pub=Nature+Portfolio&rft.eissn=2041-1723&rft.volume=10&rft.issue=1&rft.spage=1&rft.epage=12&rft_id=info:doi/10.1038%2Fs41467-019-09134-9&rft.externalDBID=DOA&rft.externalDocID=oai_doaj_org_article_fe79e943d1f44394a6f00b1338924809
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2041-1723&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2041-1723&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2041-1723&client=summon