The UCSC SARS-CoV-2 Genome Browser

The UCSC SARS-CoV-2 Genome Browser ( https://genome.ucsc.edu/covid19.html ) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR and sequencing primer...

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Published inNature genetics Vol. 52; no. 10; pp. 991 - 998
Main Authors Fernandes, Jason D., Hinrichs, Angie S., Clawson, Hiram, Gonzalez, Jairo Navarro, Lee, Brian T., Nassar, Luis R., Raney, Brian J., Rosenbloom, Kate R., Nerli, Santrupti, Rao, Arjun A., Schmelter, Daniel, Fyfe, Alastair, Maulding, Nathan, Zweig, Ann S., Lowe, Todd M., Ares, Manuel, Corbet-Detig, Russ, Kent, W. James, Haussler, David, Haeussler, Maximilian
Format Journal Article
LanguageEnglish
Published New York Nature Publishing Group US 01.10.2020
Nature Publishing Group
Subjects
631/114/2184
631/114/2785
631/326/596/4130
631/61/212
692/699/255
Agriculture
Amino acids
Animal Genetics and Genomics
Annotations
Antigenic determinants
Betacoronavirus - genetics
Biomedical and Life Sciences
Biomedicine
Cancer Research
Comment
Conserved sequence
Coronavirus Infections - virology
Coronaviruses
COVID-19
CRISPR
Databases, Genetic
Epitopes
Gene Function
Genes
Genome, Viral - genetics
Genomes
Genomics
Health aspects
Human Genetics
Humans
Internet
Medical research
Pandemics
Pneumonia, Viral - virology
Polymerase chain reaction
Proteins
R&D
Research & development
SARS-CoV-2
Severe acute respiratory syndrome coronavirus 2
Viral diseases
Viruses
United Kingdom > UK
China
Online AccessGet full text

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Abstract The UCSC SARS-CoV-2 Genome Browser ( https://genome.ucsc.edu/covid19.html ) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR and sequencing primers and CRISPR guides. We invite all investigators to contribute to this resource to accelerate research and development activities globally.
AbstractList The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT-PCR and sequencing primers and CRISPR guides. We invite all investigators to contribute to this resource to accelerate research and development activities globally.
The UCSC SARS-CoV-2 Genome Browser ( https://genome.ucsc.edu/covid19.html ) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR and sequencing primers and CRISPR guides. We invite all investigators to contribute to this resource to accelerate research and development activities globally.
The UCSC SARS-CoV-2 Genome Browser ((
Audience Academic
Author Ares, Manuel
Kent, W. James
Raney, Brian J.
Hinrichs, Angie S.
Maulding, Nathan
Lowe, Todd M.
Haussler, David
Clawson, Hiram
Nerli, Santrupti
Schmelter, Daniel
Rosenbloom, Kate R.
Fyfe, Alastair
Fernandes, Jason D.
Rao, Arjun A.
Zweig, Ann S.
Lee, Brian T.
Haeussler, Maximilian
Corbet-Detig, Russ
Gonzalez, Jairo Navarro
Nassar, Luis R.
AuthorAffiliation 2 Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
4 Molecular, Cell and Developmental Biology, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
3 ImmunoX Initiative, University of California San Francisco, San Francisco, CA 94143, USA
5 Center for Molecular Biology of RNA, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
1 Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
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– name: 5 Center for Molecular Biology of RNA, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
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  organization: Genomics Institute, University of California, Santa Cruz
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32908258$$D View this record in MEDLINE/PubMed
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Snippet The UCSC SARS-CoV-2 Genome Browser ( https://genome.ucsc.edu/covid19.html ) is an adaptation of our popular genome-browser visualization tool for this virus,...
The UCSC SARS-CoV-2 Genome Browser ((
The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus,...
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Agriculture
Amino acids
Animal Genetics and Genomics
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Antigenic determinants
Betacoronavirus - genetics
Biomedical and Life Sciences
Biomedicine
Cancer Research
Comment
Conserved sequence
Coronavirus Infections - virology
Coronaviruses
COVID-19
CRISPR
Databases, Genetic
Epitopes
Gene Function
Genes
Genome, Viral - genetics
Genomes
Genomics
Health aspects
Human Genetics
Humans
Internet
Medical research
Pandemics
Pneumonia, Viral - virology
Polymerase chain reaction
Proteins
R&D
Research & development
SARS-CoV-2
Severe acute respiratory syndrome coronavirus 2
Viral diseases
Viruses
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