Identification and complete genome analysis of a novel bovine picornavirus in Japan

• Published in: Virus research Vol. 210; pp. 205 - 212
• Main Authors: Nagai, Makoto, Omatsu, Tsutomu, Aoki, Hiroshi, Kaku, Yoshihiro, Belsham, Graham J., Haga, Kei, Naoi, Yuki, Sano, Kaori, Umetsu, Moeko, Shiokawa, Mai, Tsuchiaka, Shinobu, Furuya, Tetsuya, Okazaki, Sachiko, Katayama, Yukie, Oba, Mami, Shirai, Junsuke, Katayama, Kazuhiko, Mizutani, Tetsuya
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 02.12.2015
• Subjects: 3' untranslated regions; 5' untranslated regions; amino acids; Animals; Bovine; Cattle; Cattle Diseases - epidemiology; Cattle Diseases - virology; Chiroptera; Cluster Analysis; diarrhea; Diarrhea - epidemiology; Diarrhea - veterinary; Diarrhea - virology; dogs; etiology; Feces; Feces - virology; Feline calicivirus; Gene Order; Genes, Viral; genome; Genome, Viral; Japan; Japan - epidemiology; Metagenomics; Molecular Sequence Data; Novel picornavirus; pathogenicity; Phylogeny; Picornaviridae; Picornaviridae - classification; Picornaviridae - genetics; Picornaviridae - isolation & purification; Picornaviridae Infections - veterinary; Picornaviridae Infections - virology; Picornavirus; Prevalence; Reverse Transcriptase Polymerase Chain Reaction; RNA, Viral - genetics; sequence analysis; Sequence Analysis, DNA; Sequence Homology; Japan; Metagenomics; Novel picornavirus; Feces; Bovine; Japan

•Novel viruses were identified in feces from cattle by metagenomics approach.•These viruses had a standard picornavirus genome organization.•They are related to unclassified Chinese picornaviruses from bat, cat and dog.•These viruses were detected in 23% (20/87) feces from cattle in Hokkaido in Japa...