Characterization of Novel Rhabdoviruses in Chinese Bats

Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one...

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Published inViruses Vol. 13; no. 1; p. 64
Main Authors Luo, Dong-Sheng, Li, Bei, Shen, Xu-Rui, Jiang, Ren-Di, Zhu, Yan, Wu, Jia, Fan, Yi, Bourhy, Hervé, Hu, Ben, Ge, Xing-Yi, Shi, Zheng-Li, Dacheux, Laurent
Format Journal Article
LanguageEnglish
Published Switzerland MDPI AG 05.01.2021
MDPI
Subjects
Animals
bat
Bats
brain
Brain - virology
China
China - epidemiology
Chiroptera
Chiroptera - virology
Coronaviruses
COVID-19
Encephalitis
fish
flight
Genera
genome
Genome, Viral
Genomes
Immune system
Ledantevirus
Life Sciences
Lyssavirus
Mammals
Microbiology and Parasitology
New species
Niches
Phylogeny
Polymerase chain reaction
Rabies
Retrospective Studies
reverse transcriptase polymerase chain reaction
Reverse transcription
Rhabdoviridae
Rhabdoviridae - classification
Rhabdoviridae - isolation & purification
Rhabdoviridae Infections - epidemiology
Rhabdoviridae Infections - veterinary
Rhabdoviridae Infections - virology
rhabdovirus
Rhinolophus
RNA
RNA polymerase
RNA viruses
Saliva
Saliva - virology
Vesiculovirus
Vesiculovirus - classification
Viral infections
Virology
Viruses
China
Europe
vesiculovirus
rhabdovirus
bat
China
lyssavirus
phylogeny
brain
complete genome
ledantevirus
RT-qPCR
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Abstract Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus, Vesiculovirus, and Ledantevirus. However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006–2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
AbstractList Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus, Vesiculovirus, and Ledantevirus. However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006–2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus , Vesiculovirus , and Ledantevirus . However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006–2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus, Vesiculovirus, and Ledantevirus. However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006-2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. Rhabdoviridae is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named Lyssavirus, Vesiculovirus, and Ledantevirus. However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006-2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of Rhinolophus bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and ecological niches. In addition, they are the natural reservoirs of a variety of emerging or re-emerging zoonotic pathogens. is one of the most diverse families of RNA viruses, which consists of 20 ecologically diverse genera, infecting plants, mammals, birds, reptiles, and fish. To date, three bat-related genera are described, named , , and . However, the prevalence and the distribution of these bat-related rhabdoviruses remain largely unknown, especially in China. To fill this gap, we performed a large molecular retrospective study based on the real-time reverse transcription polymerase chain reaction (RT-qPCR) detection of lyssavirus in bat samples (1044 brain and 3532 saliva samples, from 63 different bat species) originating from 21 provinces of China during 2006-2018. None of them were positive for lyssavirus, but six bat brains (0.6%) of bat species, originating from Hubei and Hainan provinces, were positive for vesiculoviruses or ledanteviruses. Based on complete genomes, these viruses were phylogenetically classified into three putative new species, tentatively named Yinshui bat virus (YSBV), Taiyi bat virus (TYBV), and Qiongzhong bat virus (QZBV). These results indicate the novel rhabdoviruses circulated in different Chinese bat populations.
Author Jiang, Ren-Di
Wu, Jia
Shen, Xu-Rui
Dacheux, Laurent
Luo, Dong-Sheng
Li, Bei
Hu, Ben
Fan, Yi
Shi, Zheng-Li
Bourhy, Hervé
Zhu, Yan
Ge, Xing-Yi
AuthorAffiliation 1 CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; dongshengluo@outlook.com (D.-S.L.); libei@wh.iov.cn (B.L.); pukulovesu@163.com (X.-R.S.); drteamwind1004@163.com (R.-D.J.); zhuyan@wh.iov.cn (Y.Z.); wuj@wh.iov.cn (J.W.); yifanfs0224@163.com (Y.F.); huben@wh.iov.cn (B.H.)
3 Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit, 75724 Paris, France; herve.bourhy@pasteur.fr
4 Hunan Provincial Key Laboratory of Medical Virology, College of Biology, Hunan University, Changsha 410082, China; xyge@hnu.edu.cn
2 University of Chinese Academy of Sciences, Beijing 100049, China
AuthorAffiliation_xml – name: 2 University of Chinese Academy of Sciences, Beijing 100049, China
– name: 3 Institut Pasteur, Lyssavirus Epidemiology and Neuropathology Unit, 75724 Paris, France; herve.bourhy@pasteur.fr
– name: 4 Hunan Provincial Key Laboratory of Medical Virology, College of Biology, Hunan University, Changsha 410082, China; xyge@hnu.edu.cn
– name: 1 CAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; dongshengluo@outlook.com (D.-S.L.); libei@wh.iov.cn (B.L.); pukulovesu@163.com (X.-R.S.); drteamwind1004@163.com (R.-D.J.); zhuyan@wh.iov.cn (Y.Z.); wuj@wh.iov.cn (J.W.); yifanfs0224@163.com (Y.F.); huben@wh.iov.cn (B.H.)
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Issue 1
Keywords vesiculovirus
rhabdovirus
bat
China
lyssavirus
phylogeny
brain
complete genome
ledantevirus
RT-qPCR
Language English
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Snippet Bats, the second largest order of mammals worldwide, harbor specific characteristics such as sustaining flight, a special immune system, unique habits, and...
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SubjectTerms Animals
bat
Bats
brain
Brain - virology
China
China - epidemiology
Chiroptera
Chiroptera - virology
Coronaviruses
COVID-19
Encephalitis
fish
flight
Genera
genome
Genome, Viral
Genomes
Immune system
Ledantevirus
Life Sciences
Lyssavirus
Mammals
Microbiology and Parasitology
New species
Niches
Phylogeny
Polymerase chain reaction
Rabies
Retrospective Studies
reverse transcriptase polymerase chain reaction
Reverse transcription
Rhabdoviridae
Rhabdoviridae - classification
Rhabdoviridae - isolation & purification
Rhabdoviridae Infections - epidemiology
Rhabdoviridae Infections - veterinary
Rhabdoviridae Infections - virology
rhabdovirus
Rhinolophus
RNA
RNA polymerase
RNA viruses
Saliva
Saliva - virology
Vesiculovirus
Vesiculovirus - classification
Viral infections
Virology
Viruses
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Title Characterization of Novel Rhabdoviruses in Chinese Bats
URI https://www.ncbi.nlm.nih.gov/pubmed/33466539
https://www.proquest.com/docview/2476392229
https://www.proquest.com/docview/2479420375
https://www.proquest.com/docview/2524235460
https://hal.science/hal-03112841
https://pubmed.ncbi.nlm.nih.gov/PMC7824899
https://doaj.org/article/d8eec82e1f1c4564a0f40e43f3f184d8
Volume 13
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