Partial penetrance facilitates developmental evolution in bacteria

Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms differently. This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the unde...

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Published inNature (London) Vol. 460; no. 7254; pp. 510 - 514
Main Authors Elowitz, Michael B, Eldar, Avigdor, Chary, Vasant K, Xenopoulos, Panagiotis, Fontes, Michelle E, Loson, Oliver C, Dworkin, Jonathan, Piggot, Patrick J
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 23.07.2009
Nature Publishing Group
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Abstract Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms differently. This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the underlying genetic network specifies the set of possible alternative fates and how the relative frequencies of these fates evolve. Here we identify a stochastic cell fate determination process that operates in Bacillus subtilis sporulation mutants and show how it allows genetic control of the penetrance of multiple fates. Mutations in an intercompartmental signalling process generate a set of discrete alternative fates not observed in wild-type cells, including rare formation of two viable 'twin' spores, rather than one within a single cell. By genetically modulating chromosome replication and septation, we can systematically tune the penetrance of each mutant fate. Furthermore, signalling and replication perturbations synergize to significantly increase the penetrance of twin sporulation. These results suggest a potential pathway for developmental evolution between monosporulation and twin sporulation through states of intermediate twin penetrance. Furthermore, time-lapse microscopy of twin sporulation in wild-type Clostridium oceanicum shows a strong resemblance to twin sporulation in these B. subtilis mutants. Together the results suggest that noise can facilitate developmental evolution by enabling the initial expression of discrete morphological traits at low penetrance, and allowing their stabilization by gradual adjustment of genetic parameters.
AbstractList The role of partial penetrance in development Geneticists have long known that individuals with exactly the same genetic make-up can differ from one another in their development and resulting phenotype, but the developmental and evolutionary significance of the phenomenon are not clear. The nature of this 'partial penetrance', whereby the effects of a mutation are observed only in some individuals, even in an isogenic population, has been studied using Bacillus subtilis sporulation as a model developmental system. The results suggest how mutations affecting DNA replication and cell division may act in synergy to facilitate the evolution of twin sporulation as a new trait, through progressive increases in its penetrance. Individuals with exactly the same genetic make-up can differ from one another in their development and resulting phenotype when the genome contains a mutation — a phenomenon called 'partial penetrance'. Exploration of the genetic and stochastic factors controlling the proportion of abnormal 'twin' spores in mutant populations of the bacterium Bacillus subtilus now reveals how mutations affecting DNA replication and cell division may act in synergy to significantly increase the penetrance of twin sporulation. Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms differently 1 , 2 , 3 , 4 . This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the underlying genetic network specifies the set of possible alternative fates and how the relative frequencies of these fates evolve 5 , 6 , 7 , 8 . Here we identify a stochastic cell fate determination process that operates in Bacillus subtilis sporulation mutants and show how it allows genetic control of the penetrance of multiple fates. Mutations in an intercompartmental signalling process generate a set of discrete alternative fates not observed in wild-type cells, including rare formation of two viable ‘twin’ spores, rather than one within a single cell. By genetically modulating chromosome replication and septation, we can systematically tune the penetrance of each mutant fate. Furthermore, signalling and replication perturbations synergize to significantly increase the penetrance of twin sporulation. These results suggest a potential pathway for developmental evolution between monosporulation and twin sporulation through states of intermediate twin penetrance. Furthermore, time-lapse microscopy of twin sporulation in wild-type Clostridium oceanicum shows a strong resemblance to twin sporulation in these B. subtilis mutants 9 , 10 . Together the results suggest that noise can facilitate developmental evolution by enabling the initial expression of discrete morphological traits at low penetrance, and allowing their stabilization by gradual adjustment of genetic parameters.
Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms differently. This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the underlying genetic network specifies the set of possible alternative fates and how the relative frequencies of these fates evolve. Here we identify a stochastic cell fate determination process that operates in Bacillus subtilis sporulation mutants and show how it allows genetic control of the penetrance of multiple fates. Mutations in an intercompartmental signalling process generate a set of discrete alternative fates not observed in wild-type cells, including rare formation of two viable 'twin' spores, rather than one within a single cell. By genetically modulating chromosome replication and septation, we can systematically tune the penetrance of each mutant fate. Furthermore, signalling and replication perturbations synergize to significantly increase the penetrance of twin sporulation. These results suggest a potential pathway for developmental evolution between monosporulation and twin sporulation through states of intermediate twin penetrance. Furthermore, time-lapse microscopy of twin sporulation in wild-type Clostridium oceanicum shows a strong resemblance to twin sporulation in these B. subtilis mutants. Together the results suggest that noise can facilitate developmental evolution by enabling the initial expression of discrete morphological traits at low penetrance, and allowing their stabilization by gradual adjustment of genetic parameters.
Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fate of individual organisms differently 1 - 4 . This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the underlying genetic network specifies the set of possible alternative fates and how the relative frequencies of these fates evolve 5 - 8 . Here, we identify a stochastic cell fate determination process that operates in Bacillus subtilis sporulation mutants and show how it allows genetic control of the penetrance of multiple fates. Mutations in an inter-compartmental signaling process generate a set of discrete alternative fates not observed in wild-type cells, including rare formation of two viable “twin” spores, rather than one within a single cell. By genetically modulating chromosome replication and septation, we could systematically tune the penetrance of each mutant fate. Furthermore, signaling and replication perturbations synergize to dramatically increase the penetrance of twin sporulation. These results suggest a potential pathway for developmental evolution between monosporulation and twin sporulation through states of intermediate twin penetrance. Furthermore, time-lapse microscopy of twin sporulation in wild-type Clostridium oceanicum showed a strong resemblance to twin sporulation in these B. subtilis mutants 9 , 10 . Together the results suggest that noise can facilitate developmental evolution by enabling the initial expression of discrete morphological traits at low penetrance, and allowing their stabilization by gradual adjustment of genetic parameters.
Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms differently. This phenomenon, known as partial penetrance, has been observed in diverse developmental systems. However, it remains unclear how the underlying genetic network specifies the set of possible alternative fates and how the relative frequencies of these fates evolve. Here we identify a stochastic cell fate determination process that operates in Bacillus subtilis sporulation mutants and show how it allows genetic control of the penetrance of multiple fates. Mutations in an intercompartmental signalling process generate a set of discrete alternative fates not observed in wild-type cells, including rare formation of two viable 'twin' spores, rather than one within a single cell. By genetically modulating chromosome replication and septation, we can systematically tune the penetrance of each mutant fate. Furthermore, signalling and replication perturbations synergize to significantly increase the penetrance of twin sporulation. These results suggest a potential pathway for developmental evolution between monosporulation and twin sporulation through states of intermediate twin penetrance. Furthermore, time-lapse microscopy of twin sporulation in wild-type Clostridium oceanicum shows a strong resemblance to twin sporulation in these B. subtilis mutants. Together the results suggest that noise can facilitate developmental evolution by enabling the initial expression of discrete morphological traits at low penetrance, and allowing their stabilization by gradual adjustment of genetic parameters. [PUBLICATION ABSTRACT]
Audience Academic
Author Eldar, Avigdor
Dworkin, Jonathan
Xenopoulos, Panagiotis
Fontes, Michelle E
Piggot, Patrick J
Chary, Vasant K
Loson, Oliver C
Elowitz, Michael B
AuthorAffiliation 2 Department of Microbiology and Immunology, Temple University School of Medicine, 3400 North Broad St., Philadelphia, PA 19140, USA
1 Howard Hughes Medical Institute and Division of Biology and Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125
3 Department of Microbiology, College of Physicians and Surgeons, Columbia University, New York, New York 10032
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Issue 7254
Keywords Development
Bacteria
Bacillales
Bacillaceae
Bacillus subtilis
Sporulation
Language English
License CC BY 4.0
Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
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Snippet Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fates of individual organisms...
The role of partial penetrance in development Geneticists have long known that individuals with exactly the same genetic make-up can differ from one another in...
Development normally occurs similarly in all individuals within an isogenic population, but mutations often affect the fate of individual organisms differently...
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StartPage 510
SubjectTerms Bacillus subtilis
Bacillus subtilis - genetics
Bacillus subtilis - physiology
Bacteria
Bacteriology
Biological and medical sciences
Biological Evolution
Chromosomes
Clostridium
Developmental biology
DNA Replication
Evolution
Fluorescence
Fundamental and applied biological sciences. Psychology
Gene Expression Regulation, Bacterial
Gene mutations
Genetic aspects
Growth, nutrition, cell differenciation
Humanities and Social Sciences
letter
Methods
Microbiology
multidisciplinary
Mutation
Physiological aspects
Science
Science (multidisciplinary)
Spores, Bacterial - growth & development
Stochastic processes
Twins
Title Partial penetrance facilitates developmental evolution in bacteria
URI http://dx.doi.org/10.1038/nature08150
https://link.springer.com/article/10.1038/nature08150
https://www.ncbi.nlm.nih.gov/pubmed/19578359
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https://search.proquest.com/docview/20934992
https://search.proquest.com/docview/67522991
https://pubmed.ncbi.nlm.nih.gov/PMC2716064
Volume 460
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